RNA–Protein interactions for RNA: ENST00000640091.1

NECAP1-223, Transcript of NECAP endocytosis associated 1, human

TSL 2

Gene NECAP1, Length 2,115 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-223	ENST00000640091	HTRA3	P83110	453 aa		11.62	□□□□□ -0.55
NECAP1-223	ENST00000640091	CCDC173	Q0VFZ6	552 aa		11.62	□□□□□ -0.55
NECAP1-223	ENST00000640091	HSDL1	Q3SXM5	330 aa		11.62	□□□□□ -0.55
NECAP1-223	ENST00000640091	GJC2	Q5T442	439 aa	Predicted RBP	11.62	□□□□□ -0.55
NECAP1-223	ENST00000640091	MIS18BP1	Q6P0N0	1132 aa		11.62	□□□□□ -0.55
NECAP1-223	ENST00000640091	CCDC62	Q6P9F0	684 aa		11.62	□□□□□ -0.55
NECAP1-223	ENST00000640091	PADI6	Q6TGC4	694 aa		11.62	□□□□□ -0.55
NECAP1-223	ENST00000640091	ANO5	Q75V66	913 aa		11.62	□□□□□ -0.55
NECAP1-223	ENST00000640091	CAPNS2	Q96L46	248 aa		11.62	□□□□□ -0.55
NECAP1-223	ENST00000640091	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	11.62	□□□□□ -0.55
NECAP1-223	ENST00000640091	SYNRG	Q9UMZ2	1314 aa		11.62	□□□□□ -0.55
NECAP1-223	ENST00000640091	GSTTP1	A0A1W2PQM5	241 aa		11.62	□□□□□ -0.55
NECAP1-223	ENST00000640091	SLC15A5	A6NIM6	579 aa		11.62	□□□□□ -0.55
NECAP1-223	ENST00000640091	CA12	O43570	354 aa		11.62	□□□□□ -0.55
NECAP1-223	ENST00000640091	LYPLA2	O95372	231 aa		11.62	□□□□□ -0.55
NECAP1-223	ENST00000640091	CTGF	P29279	349 aa		11.62	□□□□□ -0.55
NECAP1-223	ENST00000640091	TPM4	P67936	248 aa		11.62	□□□□□ -0.55
NECAP1-223	ENST00000640091	CT47A1	Q5JQC4	288 aa	Predicted RBP	11.62	□□□□□ -0.55
NECAP1-223	ENST00000640091	FAM26F	Q5R3K3	315 aa		11.62	□□□□□ -0.55
NECAP1-223	ENST00000640091	SPATA1	Q5VX52	437 aa		11.62	□□□□□ -0.55
NECAP1-223	ENST00000640091	TAPT1	Q6NXT6	567 aa		11.62	□□□□□ -0.55
NECAP1-223	ENST00000640091	CREBRF	Q8IUR6	639 aa		11.62	□□□□□ -0.55
NECAP1-223	ENST00000640091	RDM1	Q8NG50	284 aa		11.62	□□□□□ -0.55
NECAP1-223	ENST00000640091	PDLIM2	Q96JY6	352 aa		11.62	□□□□□ -0.55
NECAP1-223	ENST00000640091	PPP1R9B	Q96SB3	815 aa		11.62	□□□□□ -0.55
NECAP1-223	ENST00000640091	RWDD2A	Q9UIY3	292 aa		11.62	□□□□□ -0.55
NECAP1-223	ENST00000640091	PCDHA2	Q9Y5H9	948 aa		11.62	□□□□□ -0.55
NECAP1-223	ENST00000640091	DOCK5	Q9H7D0	1870 aa		11.62	□□□□□ -0.55
NECAP1-223	ENST00000640091	FRMD3	A2A2Y4	597 aa		11.61	□□□□□ -0.55
NECAP1-223	ENST00000640091	PSMA7	O14818	248 aa		11.61	□□□□□ -0.55
NECAP1-223	ENST00000640091	ATG7	O95352	703 aa		11.61	□□□□□ -0.55
NECAP1-223	ENST00000640091	SUPT20HL2	P0C7V6	817 aa		11.61	□□□□□ -0.55
NECAP1-223	ENST00000640091	ATP4A	P20648	1035 aa		11.61	□□□□□ -0.55
NECAP1-223	ENST00000640091	CYP2B6	P20813	491 aa		11.61	□□□□□ -0.55
NECAP1-223	ENST00000640091	CDK11B	P21127	795 aa	Known RBP	11.61	□□□□□ -0.55
NECAP1-223	ENST00000640091	ADCYAP1R1	P41586	468 aa		11.61	□□□□□ -0.55
NECAP1-223	ENST00000640091	PSMD2	Q13200	908 aa		11.61	□□□□□ -0.55
NECAP1-223	ENST00000640091	NOG	Q13253	232 aa		11.61	□□□□□ -0.55
NECAP1-223	ENST00000640091	STIM1	Q13586	685 aa		11.61	□□□□□ -0.55
NECAP1-223	ENST00000640091	TTLL4	Q14679	1199 aa		11.61	□□□□□ -0.55
NECAP1-223	ENST00000640091	TPD52L1	Q16890	204 aa	Predicted RBP	11.61	□□□□□ -0.55
NECAP1-223	ENST00000640091	XKR9	Q5GH70	373 aa		11.61	□□□□□ -0.55
NECAP1-223	ENST00000640091	PRAMEF19	Q5SWL8	479 aa		11.61	□□□□□ -0.55
NECAP1-223	ENST00000640091	CELF3	Q5SZQ8	465 aa	Known RBP	11.61	□□□□□ -0.55
NECAP1-223	ENST00000640091	MORN1	Q5T089	497 aa		11.61	□□□□□ -0.55
NECAP1-223	ENST00000640091	ANKRD40	Q6AI12	368 aa		11.61	□□□□□ -0.55
NECAP1-223	ENST00000640091	KCNV1	Q6PIU1	500 aa		11.61	□□□□□ -0.55
NECAP1-223	ENST00000640091	METTL7B	Q6UX53	244 aa		11.61	□□□□□ -0.55
NECAP1-223	ENST00000640091	SFR1	Q86XK3	245 aa		11.61	□□□□□ -0.55
NECAP1-223	ENST00000640091	DHX37	Q8IY37	1157 aa	Known RBP	11.61	□□□□□ -0.55
NECAP1-223	ENST00000640091	TINF2	Q9BSI4	451 aa		11.61	□□□□□ -0.55
NECAP1-223	ENST00000640091	ZNF302	Q9NR11	478 aa		11.61	□□□□□ -0.55
NECAP1-223	ENST00000640091	DBR1	Q9UK59	544 aa	Known RBP	11.61	□□□□□ -0.55
NECAP1-223	ENST00000640091	USO1	O60763	962 aa	Known RBP	11.6	□□□□□ -0.55
NECAP1-223	ENST00000640091	TBCA	O75347	108 aa	Known RBP	11.6	□□□□□ -0.55
NECAP1-223	ENST00000640091	STBD1	O95210	358 aa		11.6	□□□□□ -0.55
NECAP1-223	ENST00000640091	TBC1D8	O95759	1140 aa		11.6	□□□□□ -0.55
NECAP1-223	ENST00000640091	TCF7	P36402	384 aa	Predicted RBP	11.6	□□□□□ -0.55
NECAP1-223	ENST00000640091	APLP1	P51693	650 aa		11.6	□□□□□ -0.55
NECAP1-223	ENST00000640091	ZNF75D	P51815	510 aa		11.6	□□□□□ -0.55
NECAP1-223	ENST00000640091	CASP5	P51878	434 aa		11.6	□□□□□ -0.55
NECAP1-223	ENST00000640091	MAP2K5	Q13163	448 aa		11.6	□□□□□ -0.55
NECAP1-223	ENST00000640091	MAMDC4	Q6UXC1	1216 aa		11.6	□□□□□ -0.55
NECAP1-223	ENST00000640091	ZNF467	Q7Z7K2	595 aa	Predicted RBP	11.6	□□□□□ -0.55
NECAP1-223	ENST00000640091	MYCT1	Q8N699	235 aa		11.6	□□□□□ -0.55
NECAP1-223	ENST00000640091	SPC24	Q8NBT2	197 aa		11.6	□□□□□ -0.55
NECAP1-223	ENST00000640091	SCFD2	Q8WU76	684 aa		11.6	□□□□□ -0.55
NECAP1-223	ENST00000640091	ATP6V0A1	Q93050	837 aa		11.6	□□□□□ -0.55
NECAP1-223	ENST00000640091	CCDC43	Q96MW1	224 aa	Known RBP	11.6	□□□□□ -0.55
NECAP1-223	ENST00000640091	SPATA33	Q96N06	139 aa		11.6	□□□□□ -0.55
NECAP1-223	ENST00000640091	PCYT2	Q99447	389 aa		11.6	□□□□□ -0.55
NECAP1-223	ENST00000640091	ARHGAP39	Q9C0H5	1083 aa		11.6	□□□□□ -0.55
NECAP1-223	ENST00000640091	SEMA6B	Q9H3T3	888 aa		11.6	□□□□□ -0.55
NECAP1-223	ENST00000640091	CREBZF	Q9NS37	354 aa		11.6	□□□□□ -0.55
NECAP1-223	ENST00000640091	FLRT1	Q9NZU1	646 aa		11.6	□□□□□ -0.55
NECAP1-223	ENST00000640091	IFNK	Q9P0W0	207 aa		11.6	□□□□□ -0.55
NECAP1-223	ENST00000640091	MCM3AP	O60318	1980 aa		11.6	□□□□□ -0.55
NECAP1-223	ENST00000640091	LOC102724159	A0A0B4J2E5	919 aa		11.6	□□□□□ -0.55
NECAP1-223	ENST00000640091	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	11.6	□□□□□ -0.55
NECAP1-223	ENST00000640091	RASSF10	A6NK89	507 aa		11.6	□□□□□ -0.55
NECAP1-223	ENST00000640091	TNPO2	O14787	897 aa	Known RBP	11.6	□□□□□ -0.55
NECAP1-223	ENST00000640091	FAM13A	O94988	1023 aa		11.6	□□□□□ -0.55
NECAP1-223	ENST00000640091	SERPINC1	P01008	464 aa		11.6	□□□□□ -0.55
NECAP1-223	ENST00000640091	FANCC	Q00597	558 aa		11.6	□□□□□ -0.55
NECAP1-223	ENST00000640091	PRKCE	Q02156	737 aa		11.6	□□□□□ -0.55
NECAP1-223	ENST00000640091	PWP2	Q15269	919 aa	Known RBP	11.6	□□□□□ -0.55
NECAP1-223	ENST00000640091	CCL14	Q16627	93 aa		11.6	□□□□□ -0.55
NECAP1-223	ENST00000640091	PTPN21	Q16825	1174 aa		11.6	□□□□□ -0.55
NECAP1-223	ENST00000640091	SARM1	Q6SZW1	724 aa		11.6	□□□□□ -0.55
NECAP1-223	ENST00000640091	NELFCD	Q8IXH7	590 aa		11.6	□□□□□ -0.55
NECAP1-223	ENST00000640091	SEPT1	Q8WYJ6	367 aa		11.6	□□□□□ -0.55
NECAP1-223	ENST00000640091	P2RX5	Q93086	422 aa		11.6	□□□□□ -0.55
NECAP1-223	ENST00000640091	DHTKD1	Q96HY7	919 aa	Predicted RBP	11.6	□□□□□ -0.55
NECAP1-223	ENST00000640091	CEP170P1	Q96L14	293 aa		11.6	□□□□□ -0.55
NECAP1-223	ENST00000640091	KATNBL1	Q9H079	304 aa		11.6	□□□□□ -0.55
NECAP1-223	ENST00000640091	MRPL44	Q9H9J2	332 aa	Known RBP	11.6	□□□□□ -0.55
NECAP1-223	ENST00000640091	SEPT9	Q9UHD8	586 aa	Predicted RBP	11.6	□□□□□ -0.55
NECAP1-223	ENST00000640091	DIS3	Q9Y2L1	958 aa	Known RBP	11.6	□□□□□ -0.55
NECAP1-223	ENST00000640091	COL4A3BP	Q9Y5P4	624 aa		11.6	□□□□□ -0.55
NECAP1-223	ENST00000640091	MAFB	Q9Y5Q3	323 aa	Predicted RBP	11.6	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms