RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 SOX9P48436 509 aa9.01□□□□□ -0.97
SCARB2-220ENST00000640076 TRAPPC10P48553 1259 aa9.01□□□□□ -0.97
SCARB2-220ENST00000640076 INHBEP58166 350 aa9.01□□□□□ -0.97
SCARB2-220ENST00000640076 CEBPZQ03701 1054 aaKnown RBP9.01□□□□□ -0.97
SCARB2-220ENST00000640076 AP3B2Q13367 1082 aa9.01□□□□□ -0.97
SCARB2-220ENST00000640076 SQSTM1Q13501 440 aa9.01□□□□□ -0.97
SCARB2-220ENST00000640076 DHX8Q14562 1220 aaKnown RBP9.01□□□□□ -0.97
SCARB2-220ENST00000640076 NONOQ15233 471 aaKnown RBP eCLIP9.01□□□□□ -0.97
SCARB2-220ENST00000640076 NFE2Q16621 373 aaPredicted RBP9.01□□□□□ -0.97
SCARB2-220ENST00000640076 INF2Q27J81 1249 aa9.01□□□□□ -0.97
SCARB2-220ENST00000640076 TKFCQ3LXA3 575 aa9.01□□□□□ -0.97
SCARB2-220ENST00000640076 ANO1Q5XXA6 986 aa9.01□□□□□ -0.97
SCARB2-220ENST00000640076 MCTP2Q6DN12 878 aa9.01□□□□□ -0.97
SCARB2-220ENST00000640076 JAMLQ86YT9 394 aa9.01□□□□□ -0.97
SCARB2-220ENST00000640076 RIOX2Q8IUF8 465 aa9.01□□□□□ -0.97
SCARB2-220ENST00000640076 SMCR8Q8TEV9 937 aaPredicted RBP9.01□□□□□ -0.97
SCARB2-220ENST00000640076 EDEM1Q92611 657 aa9.01□□□□□ -0.97
SCARB2-220ENST00000640076 MYO19Q96H55 970 aa9.01□□□□□ -0.97
SCARB2-220ENST00000640076 PGBD1Q96JS3 809 aa9.01□□□□□ -0.97
SCARB2-220ENST00000640076 PAGR1Q9BTK6 254 aa9.01□□□□□ -0.97
SCARB2-220ENST00000640076 ZBED2Q9BTP6 218 aa9.01□□□□□ -0.97
SCARB2-220ENST00000640076 SCAND2PQ9GZW5 306 aaPredicted RBP9.01□□□□□ -0.97
SCARB2-220ENST00000640076 SPATC1LQ9H0A9 340 aa9.01□□□□□ -0.97
SCARB2-220ENST00000640076 ZCCHC17Q9NP64 241 aaKnown RBP9.01□□□□□ -0.97
SCARB2-220ENST00000640076 RTEL1Q9NZ71 1219 aa9.01□□□□□ -0.97
SCARB2-220ENST00000640076 PRKAG3Q9UGI9 489 aa9.01□□□□□ -0.97
SCARB2-220ENST00000640076 NOL7Q9UMY1 257 aaKnown RBP9.01□□□□□ -0.97
SCARB2-220ENST00000640076 ATP8A1Q9Y2Q0 1164 aa9.01□□□□□ -0.97
SCARB2-220ENST00000640076 RABGAP1Q9Y3P9 1069 aa9.01□□□□□ -0.97
SCARB2-220ENST00000640076 CLIC4Q9Y696 253 aa9.01□□□□□ -0.97
SCARB2-220ENST00000640076 RASSF10A6NK89 507 aa9□□□□□ -0.97
SCARB2-220ENST00000640076 WNT7AO00755 349 aa9□□□□□ -0.97
SCARB2-220ENST00000640076 RNF40O75150 1001 aa9□□□□□ -0.97
SCARB2-220ENST00000640076 RGS20O76081 388 aa9□□□□□ -0.97
SCARB2-220ENST00000640076 LDHAP00338 332 aaKnown RBP9□□□□□ -0.97
SCARB2-220ENST00000640076 FOSP01100 380 aaPredicted RBP9□□□□□ -0.97
SCARB2-220ENST00000640076 HSD17B4P51659 736 aa9□□□□□ -0.97
SCARB2-220ENST00000640076 NFKBIBQ15653 356 aa9□□□□□ -0.97
SCARB2-220ENST00000640076 CYP4F22Q6NT55 531 aa9□□□□□ -0.97
SCARB2-220ENST00000640076 SDR16C5Q8N3Y7 309 aa9□□□□□ -0.97
SCARB2-220ENST00000640076 TBCKQ8TEA7 893 aa9□□□□□ -0.97
SCARB2-220ENST00000640076 LEO1Q8WVC0 666 aaPredicted RBP9□□□□□ -0.97
SCARB2-220ENST00000640076 PARK7Q99497 189 aaKnown RBP9□□□□□ -0.97
SCARB2-220ENST00000640076 EIF2AK3Q9NZJ5 1116 aaKnown RBP9□□□□□ -0.97
SCARB2-220ENST00000640076 FAM8A1Q9UBU6 413 aa9□□□□□ -0.97
SCARB2-220ENST00000640076 RABGEF1Q9UJ41 708 aa9□□□□□ -0.97
SCARB2-220ENST00000640076 R3HCC1Q9Y3T6 440 aaKnown RBP9□□□□□ -0.97
SCARB2-220ENST00000640076 PCDHB6Q9Y5E3 794 aa9□□□□□ -0.97
SCARB2-220ENST00000640076 SPDYE3A6NKU9 549 aa8.99□□□□□ -0.97
SCARB2-220ENST00000640076 GOLGA6L22H0YM25 854 aa8.99□□□□□ -0.97
SCARB2-220ENST00000640076 YEATS4O95619 227 aa8.99□□□□□ -0.97
SCARB2-220ENST00000640076 GCLCP48506 637 aaPredicted RBP8.99□□□□□ -0.97
SCARB2-220ENST00000640076 SREBF2Q12772 1141 aa8.99□□□□□ -0.97
SCARB2-220ENST00000640076 PTPAQ15257 358 aa8.99□□□□□ -0.97
SCARB2-220ENST00000640076 DEFB115Q30KQ5 88 aa8.99□□□□□ -0.97
SCARB2-220ENST00000640076 TTC38Q5R3I4 469 aa8.99□□□□□ -0.97
SCARB2-220ENST00000640076 NEK8Q86SG6 692 aa8.99□□□□□ -0.97
SCARB2-220ENST00000640076 FCHSD1Q86WN1 690 aa8.99□□□□□ -0.97
SCARB2-220ENST00000640076 SAMD3Q8N6K7 520 aa8.99□□□□□ -0.97
SCARB2-220ENST00000640076 LINC00301Q8NCQ3 95 aa8.99□□□□□ -0.97
SCARB2-220ENST00000640076 CHST13Q8NET6 341 aa8.99□□□□□ -0.97
SCARB2-220ENST00000640076 EMID1Q96A84 441 aaPredicted RBP8.99□□□□□ -0.97
SCARB2-220ENST00000640076 ZIC5Q96T25 663 aa8.99□□□□□ -0.97
SCARB2-220ENST00000640076 MOV10L1Q9BXT6 1211 aaKnown RBP8.99□□□□□ -0.97
SCARB2-220ENST00000640076 ANO3Q9BYT9 981 aa8.99□□□□□ -0.97
SCARB2-220ENST00000640076 ACAD9Q9H845 621 aa8.99□□□□□ -0.97
SCARB2-220ENST00000640076 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.99□□□□□ -0.97
SCARB2-220ENST00000640076 MAP3K20Q9NYL2 800 aaKnown RBP8.99□□□□□ -0.97
SCARB2-220ENST00000640076 ADAMTS1Q9UHI8 967 aa8.99□□□□□ -0.97
SCARB2-220ENST00000640076 RCOR1Q9UKL0 485 aa8.99□□□□□ -0.97
SCARB2-220ENST00000640076 PCNTO95613 3336 aa8.99□□□□□ -0.97
SCARB2-220ENST00000640076 ELP1O95163 1332 aa8.99□□□□□ -0.97
SCARB2-220ENST00000640076 TSPAN6O43657 245 aa8.99□□□□□ -0.97
SCARB2-220ENST00000640076 EDIL3O43854 480 aa8.99□□□□□ -0.97
SCARB2-220ENST00000640076 RPS6P62753 249 aaKnown RBP8.99□□□□□ -0.97
SCARB2-220ENST00000640076 ERVK-9P63128 1117 aa8.99□□□□□ -0.97
SCARB2-220ENST00000640076 ERVK-24P63145 666 aa8.99□□□□□ -0.97
SCARB2-220ENST00000640076 NOGQ13253 232 aa8.99□□□□□ -0.97
SCARB2-220ENST00000640076 GRM1Q13255 1194 aa8.99□□□□□ -0.97
SCARB2-220ENST00000640076 SLC30A10Q6XR72 485 aa8.99□□□□□ -0.97
SCARB2-220ENST00000640076 RNF207Q6ZRF8 634 aa8.99□□□□□ -0.97
SCARB2-220ENST00000640076 CRYGNQ8WXF5 182 aa8.99□□□□□ -0.97
SCARB2-220ENST00000640076 CAPNS2Q96L46 248 aa8.99□□□□□ -0.97
SCARB2-220ENST00000640076 MPHOSPH6Q99547 160 aaKnown RBP8.99□□□□□ -0.97
SCARB2-220ENST00000640076 A1CFQ9NQ94 594 aaKnown RBP8.99□□□□□ -0.97
SCARB2-220ENST00000640076 COL20A1Q9P218 1284 aa8.99□□□□□ -0.97
SCARB2-220ENST00000640076 MORF4L1Q9UBU8 362 aa8.99□□□□□ -0.97
SCARB2-220ENST00000640076 SLC25A27O95847 323 aa8.98□□□□□ -0.97
SCARB2-220ENST00000640076 CALRP27797 417 aaKnown RBP8.98□□□□□ -0.97
SCARB2-220ENST00000640076 COPB2P35606 906 aa8.98□□□□□ -0.97
SCARB2-220ENST00000640076 SREBF1P36956 1147 aa8.98□□□□□ -0.97
SCARB2-220ENST00000640076 TM4SF4P48230 202 aa8.98□□□□□ -0.97
SCARB2-220ENST00000640076 BAATQ14032 418 aaPredicted RBP8.98□□□□□ -0.97
SCARB2-220ENST00000640076 SLC39A14Q15043 492 aa8.98□□□□□ -0.97
SCARB2-220ENST00000640076 STK38Q15208 465 aa8.98□□□□□ -0.97
SCARB2-220ENST00000640076 NSMFQ6X4W1 530 aa8.98□□□□□ -0.97
SCARB2-220ENST00000640076 NCAPG2Q86XI2 1143 aa8.98□□□□□ -0.97
SCARB2-220ENST00000640076 ANKRD13CQ8N6S4 541 aa8.98□□□□□ -0.97
SCARB2-220ENST00000640076 GPRC5AQ8NFJ5 357 aa8.98□□□□□ -0.97
SCARB2-220ENST00000640076 KCNG4Q8TDN1 519 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms