RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 LRSAM1Q6UWE0 723 aa7.26□□□□□ -1.25
CCDC7-216ENST00000640058 CHST13Q8NET6 341 aa7.26□□□□□ -1.25
CCDC7-216ENST00000640058 AJUBAQ96IF1 538 aa7.26□□□□□ -1.25
CCDC7-216ENST00000640058 DRC1Q96MC2 740 aa7.26□□□□□ -1.25
CCDC7-216ENST00000640058 CLUHP3Q96NS8 147 aa7.26□□□□□ -1.25
CCDC7-216ENST00000640058 GPR20Q99678 358 aa7.26□□□□□ -1.25
CCDC7-216ENST00000640058 BTBD7Q9P203 1132 aa7.26□□□□□ -1.25
CCDC7-216ENST00000640058 SLC12A8A0AV02 714 aa7.25□□□□□ -1.25
CCDC7-216ENST00000640058 PLD2O14939 933 aa7.25□□□□□ -1.25
CCDC7-216ENST00000640058 KRT37O76014 449 aa7.25□□□□□ -1.25
CCDC7-216ENST00000640058 TMEM132BQ14DG7 1078 aa7.25□□□□□ -1.25
CCDC7-216ENST00000640058 CCDC144BQ3MJ40 725 aa7.25□□□□□ -1.25
CCDC7-216ENST00000640058 TMEM177Q53S58 311 aa7.25□□□□□ -1.25
CCDC7-216ENST00000640058 DPP8Q6V1X1 898 aaPredicted RBP7.25□□□□□ -1.25
CCDC7-216ENST00000640058 GGNQ86UU5 652 aa7.25□□□□□ -1.25
CCDC7-216ENST00000640058 IFNL2Q8IZJ0 200 aa7.25□□□□□ -1.25
CCDC7-216ENST00000640058 C2orf69Q8N8R5 385 aa7.25□□□□□ -1.25
CCDC7-216ENST00000640058 SH3TC2Q8TF17 1288 aa7.25□□□□□ -1.25
CCDC7-216ENST00000640058 SAMD11Q96NU1 681 aa7.25□□□□□ -1.25
CCDC7-216ENST00000640058 GALNT8Q9NY28 637 aa7.25□□□□□ -1.25
CCDC7-216ENST00000640058 GPR42O15529 346 aa7.24□□□□□ -1.25
CCDC7-216ENST00000640058 CNOT4O95628 575 aaKnown RBP7.24□□□□□ -1.25
CCDC7-216ENST00000640058 MPIG6BO95866 241 aa7.24□□□□□ -1.25
CCDC7-216ENST00000640058 INSRRP14616 1297 aa7.24□□□□□ -1.25
CCDC7-216ENST00000640058 HERVK_113P62684 666 aa7.24□□□□□ -1.25
CCDC7-216ENST00000640058 USP10Q14694 798 aaKnown RBP7.24□□□□□ -1.25
CCDC7-216ENST00000640058 ICAM4Q14773 271 aa7.24□□□□□ -1.25
CCDC7-216ENST00000640058 CIR1Q86X95 450 aaPredicted RBP7.24□□□□□ -1.25
CCDC7-216ENST00000640058 REXO1L1PQ8IX06 675 aa7.24□□□□□ -1.25
CCDC7-216ENST00000640058 HIPK4Q8NE63 616 aa7.24□□□□□ -1.25
CCDC7-216ENST00000640058 GBP4Q96PP9 640 aa7.24□□□□□ -1.25
CCDC7-216ENST00000640058 AMNQ9BXJ7 453 aa7.24□□□□□ -1.25
CCDC7-216ENST00000640058 KATNBL1Q9H079 304 aa7.24□□□□□ -1.25
CCDC7-216ENST00000640058 MEGF9Q9H1U4 602 aa7.24□□□□□ -1.25
CCDC7-216ENST00000640058 KCNH7Q9NS40 1196 aa7.24□□□□□ -1.25
CCDC7-216ENST00000640058 PRAMEF22A3QJZ6 481 aa7.23□□□□□ -1.25
CCDC7-216ENST00000640058 RASSF10A6NK89 507 aa7.23□□□□□ -1.25
CCDC7-216ENST00000640058 M0R2C6 588 aa7.23□□□□□ -1.25
CCDC7-216ENST00000640058 PPP1R12AO14974 1030 aaPredicted RBP7.23□□□□□ -1.25
CCDC7-216ENST00000640058 FOXP2O15409 715 aa7.23□□□□□ -1.25
CCDC7-216ENST00000640058 KCNQ2O43526 872 aa7.23□□□□□ -1.25
CCDC7-216ENST00000640058 HIP1RO75146 1068 aa7.23□□□□□ -1.25
CCDC7-216ENST00000640058 POLD1P28340 1107 aa7.23□□□□□ -1.25
CCDC7-216ENST00000640058 KCNQ1P51787 676 aa7.23□□□□□ -1.25
CCDC7-216ENST00000640058 IRF9Q00978 393 aa7.23□□□□□ -1.25
CCDC7-216ENST00000640058 TOP3AQ13472 1001 aaPredicted RBP7.23□□□□□ -1.25
CCDC7-216ENST00000640058 ASB15Q8WXK1 588 aa7.23□□□□□ -1.25
CCDC7-216ENST00000640058 UBXN4Q92575 508 aa7.23□□□□□ -1.25
CCDC7-216ENST00000640058 ERCC4Q92889 916 aaPredicted RBP7.23□□□□□ -1.25
CCDC7-216ENST00000640058 GNRHR2Q96P88 292 aa7.23□□□□□ -1.25
CCDC7-216ENST00000640058 LRRC37BQ96QE4 947 aa7.23□□□□□ -1.25
CCDC7-216ENST00000640058 PIF1Q9H611 641 aa7.23□□□□□ -1.25
CCDC7-216ENST00000640058 CDC42EP3Q9UKI2 254 aa7.23□□□□□ -1.25
CCDC7-216ENST00000640058 SLC4A7Q9Y6M7 1214 aa7.23□□□□□ -1.25
CCDC7-216ENST00000640058 OPA1O60313 960 aa7.22□□□□□ -1.25
CCDC7-216ENST00000640058 GLRX3O76003 335 aaKnown RBP7.22□□□□□ -1.25
CCDC7-216ENST00000640058 ZNF20P17024 532 aa7.22□□□□□ -1.25
CCDC7-216ENST00000640058 ZNF460Q14592 562 aa7.22□□□□□ -1.25
CCDC7-216ENST00000640058 NOLC1Q14978 699 aaKnown RBP eCLIP7.22□□□□□ -1.25
CCDC7-216ENST00000640058 SLFN13Q68D06 897 aa7.22□□□□□ -1.25
CCDC7-216ENST00000640058 DBX2Q6ZNG2 339 aa7.22□□□□□ -1.25
CCDC7-216ENST00000640058 WDR48Q8TAF3 677 aa7.22□□□□□ -1.25
CCDC7-216ENST00000640058 CARD11Q9BXL7 1154 aa7.22□□□□□ -1.25
CCDC7-216ENST00000640058 KRTAP4-11Q9BYQ6 195 aa7.22□□□□□ -1.25
CCDC7-216ENST00000640058 KRTAP4-2Q9BYR5 136 aa7.22□□□□□ -1.25
CCDC7-216ENST00000640058 KRTAP3-1Q9BYR8 98 aa7.22□□□□□ -1.25
CCDC7-216ENST00000640058 SAMD15Q9P1V8 674 aa7.22□□□□□ -1.25
CCDC7-216ENST00000640058 B3GALT1Q9Y5Z6 326 aa7.22□□□□□ -1.25
CCDC7-216ENST00000640058 DNAJC8O75937 253 aaPredicted RBP7.21□□□□□ -1.26
CCDC7-216ENST00000640058 IGFALSP35858 605 aa7.21□□□□□ -1.26
CCDC7-216ENST00000640058 ECE1P42892 770 aa7.21□□□□□ -1.26
CCDC7-216ENST00000640058 CD83Q01151 205 aa7.21□□□□□ -1.26
CCDC7-216ENST00000640058 PUM1Q14671 1186 aaKnown RBP eCLIP7.21□□□□□ -1.26
CCDC7-216ENST00000640058 ZNF568Q3ZCX4 644 aa7.21□□□□□ -1.26
CCDC7-216ENST00000640058 OTOP2Q7RTS6 562 aa7.21□□□□□ -1.26
CCDC7-216ENST00000640058 DDX53Q86TM3 631 aaKnown RBP7.21□□□□□ -1.26
CCDC7-216ENST00000640058 TTC9BQ8N6N2 239 aa7.21□□□□□ -1.26
CCDC7-216ENST00000640058 DLG3Q92796 817 aa7.21□□□□□ -1.26
CCDC7-216ENST00000640058 LMF1Q96S06 567 aa7.21□□□□□ -1.26
CCDC7-216ENST00000640058 JAG2Q9Y219 1238 aa7.21□□□□□ -1.26
CCDC7-216ENST00000640058 TNPO3Q9Y5L0 923 aaKnown RBP7.21□□□□□ -1.26
CCDC7-216ENST00000640058 CUTAO60888 179 aa7.2□□□□□ -1.26
CCDC7-216ENST00000640058 NPTXRO95502 500 aa7.2□□□□□ -1.26
CCDC7-216ENST00000640058 ASMTLO95671 621 aa7.2□□□□□ -1.26
CCDC7-216ENST00000640058 HMGCRP04035 888 aa7.2□□□□□ -1.26
CCDC7-216ENST00000640058 ZXDCQ2QGD7 858 aaPredicted RBP7.2□□□□□ -1.26
CCDC7-216ENST00000640058 FNDC3BQ53EP0 1204 aaKnown RBP7.2□□□□□ -1.26
CCDC7-216ENST00000640058 CATSPEREQ5SY80 951 aa7.2□□□□□ -1.26
CCDC7-216ENST00000640058 ZCCHC8Q6NZY4 707 aaKnown RBP7.2□□□□□ -1.26
CCDC7-216ENST00000640058 ZNF585AQ6P3V2 769 aa7.2□□□□□ -1.26
CCDC7-216ENST00000640058 WNK4Q96J92 1243 aa7.2□□□□□ -1.26
CCDC7-216ENST00000640058 BOCQ9BWV1 1114 aa7.2□□□□□ -1.26
CCDC7-216ENST00000640058 BTBD2Q9BX70 525 aa7.2□□□□□ -1.26
CCDC7-216ENST00000640058 KIAA1683Q9H0B3 1180 aa7.2□□□□□ -1.26
CCDC7-216ENST00000640058 ZBTB48P10074 688 aaPredicted RBP7.19□□□□□ -1.26
CCDC7-216ENST00000640058 SDSP20132 328 aa7.19□□□□□ -1.26
CCDC7-216ENST00000640058 ETV4P43268 484 aa7.19□□□□□ -1.26
CCDC7-216ENST00000640058 C21orf62-AS1Q17RA5 79 aa7.19□□□□□ -1.26
CCDC7-216ENST00000640058 RNF151Q2KHN1 245 aa7.19□□□□□ -1.26
CCDC7-216ENST00000640058 NPM2Q86SE8 214 aaKnown RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms