RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 FAM167AQ96KS9 214 aa20.03■□□□□ 0.8
PTPN11-207ENST00000639857 NAP1L4Q99733 375 aaKnown RBP20.03■□□□□ 0.8
PTPN11-207ENST00000639857 KCNJ14Q9UNX9 436 aa20.03■□□□□ 0.8
PTPN11-207ENST00000639857 SQORQ9Y6N5 450 aa20.03■□□□□ 0.8
PTPN11-207ENST00000639857 COL4A6Q14031 1691 aa20.03■□□□□ 0.8
PTPN11-207ENST00000639857 IGSF9BQ9UPX0 1349 aa20.02■□□□□ 0.8
PTPN11-207ENST00000639857 CHRNA1P02708 482 aa20.02■□□□□ 0.8
PTPN11-207ENST00000639857 JAK3P52333 1124 aa20.02■□□□□ 0.8
PTPN11-207ENST00000639857 IGBP1P78318 339 aa20.02■□□□□ 0.8
PTPN11-207ENST00000639857 MGAT3Q09327 533 aa20.02■□□□□ 0.8
PTPN11-207ENST00000639857 ZNF484Q5JVG2 852 aa20.02■□□□□ 0.8
PTPN11-207ENST00000639857 LRCH2Q5VUJ6 765 aa20.02■□□□□ 0.8
PTPN11-207ENST00000639857 IER5Q5VY09 327 aa20.02■□□□□ 0.8
PTPN11-207ENST00000639857 SWSAP1Q6NVH7 229 aa20.02■□□□□ 0.8
PTPN11-207ENST00000639857 NME8Q8N427 588 aa20.02■□□□□ 0.8
PTPN11-207ENST00000639857 NECAB1Q8N987 351 aa20.02■□□□□ 0.8
PTPN11-207ENST00000639857 USP38Q8NB14 1042 aa20.02■□□□□ 0.8
PTPN11-207ENST00000639857 NSUN7Q8NE18 718 aaKnown RBP20.02■□□□□ 0.8
PTPN11-207ENST00000639857 GAS2L1Q99501 681 aaPredicted RBP20.02■□□□□ 0.8
PTPN11-207ENST00000639857 TEKT3Q9BXF9 490 aa20.02■□□□□ 0.8
PTPN11-207ENST00000639857 BRMS1Q9HCU9 246 aa20.02■□□□□ 0.8
PTPN11-207ENST00000639857 CEP131Q9UPN4 1083 aa20.02■□□□□ 0.8
PTPN11-207ENST00000639857 LIMCH1Q9UPQ0 1083 aa20.02■□□□□ 0.8
PTPN11-207ENST00000639857 CHD7Q9P2D1 2997 aa20.01■□□□□ 0.79
PTPN11-207ENST00000639857 SMIM35A0A1B0GVV1 85 aa20.01■□□□□ 0.79
PTPN11-207ENST00000639857 M0QZ92 97 aa20.01■□□□□ 0.79
PTPN11-207ENST00000639857 TLL1O43897 1013 aa20.01■□□□□ 0.79
PTPN11-207ENST00000639857 GJB5O95377 273 aa20.01■□□□□ 0.79
PTPN11-207ENST00000639857 AMHP03971 560 aa20.01■□□□□ 0.79
PTPN11-207ENST00000639857 CA3P07451 260 aa20.01■□□□□ 0.79
PTPN11-207ENST00000639857 FDPSP14324 419 aaKnown RBP20.01■□□□□ 0.79
PTPN11-207ENST00000639857 DEFB103AP81534 67 aa20.01■□□□□ 0.79
PTPN11-207ENST00000639857 MRPS6P82932 125 aaKnown RBP20.01■□□□□ 0.79
PTPN11-207ENST00000639857 TCTN1Q2MV58 587 aa20.01■□□□□ 0.79
PTPN11-207ENST00000639857 NEK8Q86SG6 692 aa20.01■□□□□ 0.79
PTPN11-207ENST00000639857 MAFAQ8NHW3 353 aaPredicted RBP20.01■□□□□ 0.79
PTPN11-207ENST00000639857 DNAJB3Q8WWF6 145 aa20.01■□□□□ 0.79
PTPN11-207ENST00000639857 IFIH1Q9BYX4 1025 aaKnown RBP20.01■□□□□ 0.79
PTPN11-207ENST00000639857 SAMM50Q9Y512 469 aa20.01■□□□□ 0.79
PTPN11-207ENST00000639857 KDM3AQ9Y4C1 1321 aa20.01■□□□□ 0.79
PTPN11-207ENST00000639857 PSMD10O75832 226 aa20■□□□□ 0.79
PTPN11-207ENST00000639857 TDP2O95551 362 aa20■□□□□ 0.79
PTPN11-207ENST00000639857 MYOGP15173 224 aa20■□□□□ 0.79
PTPN11-207ENST00000639857 RBM25P49756 843 aaKnown RBP20■□□□□ 0.79
PTPN11-207ENST00000639857 INF2Q27J81 1249 aa20■□□□□ 0.79
PTPN11-207ENST00000639857 PPP4R3AQ6IN85 833 aa20■□□□□ 0.79
PTPN11-207ENST00000639857 MTHFD1LQ6UB35 978 aa20■□□□□ 0.79
PTPN11-207ENST00000639857 ETNPPLQ8TBG4 499 aa20■□□□□ 0.79
PTPN11-207ENST00000639857 DISC1Q9NRI5 854 aa20■□□□□ 0.79
PTPN11-207ENST00000639857 DDX25Q9UHL0 483 aaKnown RBP20■□□□□ 0.79
PTPN11-207ENST00000639857 KRT2P35908 639 aa19.99■□□□□ 0.79
PTPN11-207ENST00000639857 FBXO47Q5MNV8 452 aa19.99■□□□□ 0.79
PTPN11-207ENST00000639857 B3GNT9Q6UX72 402 aa19.99■□□□□ 0.79
PTPN11-207ENST00000639857 TSHZ1Q6ZSZ6 1077 aa19.99■□□□□ 0.79
PTPN11-207ENST00000639857 CKAP2LQ8IYA6 745 aa19.99■□□□□ 0.79
PTPN11-207ENST00000639857 RAD9AQ99638 391 aa19.99■□□□□ 0.79
PTPN11-207ENST00000639857 LLPHQ9BRT6 129 aaKnown RBP19.99■□□□□ 0.79
PTPN11-207ENST00000639857 ZBED2Q9BTP6 218 aa19.99■□□□□ 0.79
PTPN11-207ENST00000639857 GABBR1Q9UBS5 961 aa19.99■□□□□ 0.79
PTPN11-207ENST00000639857 TRPV2Q9Y5S1 764 aa19.99■□□□□ 0.79
PTPN11-207ENST00000639857 CDY2AQ9Y6F7 541 aa19.99■□□□□ 0.79
PTPN11-207ENST00000639857 RALGAPA2Q2PPJ7 1873 aa19.99■□□□□ 0.79
PTPN11-207ENST00000639857 EYSQ5T1H1 3165 aa19.98■□□□□ 0.79
PTPN11-207ENST00000639857 ZBTB42B2RXF5 422 aa19.98■□□□□ 0.79
PTPN11-207ENST00000639857 TBX3O15119 743 aa19.98■□□□□ 0.79
PTPN11-207ENST00000639857 ATP4AP20648 1035 aa19.98■□□□□ 0.79
PTPN11-207ENST00000639857 KLRC1P26715 233 aa19.98■□□□□ 0.79
PTPN11-207ENST00000639857 TRIM29Q14134 588 aa19.98■□□□□ 0.79
PTPN11-207ENST00000639857 LPIN1Q14693 890 aa19.98■□□□□ 0.79
PTPN11-207ENST00000639857 LETM2Q2VYF4 491 aa19.98■□□□□ 0.79
PTPN11-207ENST00000639857 TRAPPC12Q8WVT3 735 aa19.98■□□□□ 0.79
PTPN11-207ENST00000639857 ZSCAN31Q96LW9 406 aaPredicted RBP19.98■□□□□ 0.79
PTPN11-207ENST00000639857 FAM20AQ96MK3 541 aa19.98■□□□□ 0.79
PTPN11-207ENST00000639857 UIMC1Q96RL1 719 aa19.98■□□□□ 0.79
PTPN11-207ENST00000639857 KIF2CQ99661 725 aa19.98■□□□□ 0.79
PTPN11-207ENST00000639857 FAM49AQ9H0Q0 323 aaPredicted RBP19.98■□□□□ 0.79
PTPN11-207ENST00000639857 UNC45AQ9H3U1 944 aa19.98■□□□□ 0.79
PTPN11-207ENST00000639857 PRDM12Q9H4Q4 367 aa19.98■□□□□ 0.79
PTPN11-207ENST00000639857 SH2B1Q9NRF2 756 aaPredicted RBP19.98■□□□□ 0.79
PTPN11-207ENST00000639857 TTC3P53804 2025 aa19.98■□□□□ 0.79
PTPN11-207ENST00000639857 COL4A4P53420 1690 aaPredicted RBP19.97■□□□□ 0.79
PTPN11-207ENST00000639857 MMP1P03956 469 aa19.97■□□□□ 0.79
PTPN11-207ENST00000639857 GHRP10912 638 aa19.97■□□□□ 0.79
PTPN11-207ENST00000639857 TAP1Q03518 808 aa19.97■□□□□ 0.79
PTPN11-207ENST00000639857 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.97■□□□□ 0.794e-6■■■■□ 19.8
PTPN11-207ENST00000639857 PIK3AP1Q6ZUJ8 805 aa19.97■□□□□ 0.79
PTPN11-207ENST00000639857 ZNF710Q8N1W2 664 aa19.97■□□□□ 0.79
PTPN11-207ENST00000639857 TNFRSF25Q93038 417 aa19.97■□□□□ 0.79
PTPN11-207ENST00000639857 KCNMB3Q9NPA1 279 aa19.97■□□□□ 0.79
PTPN11-207ENST00000639857 GJB4Q9NTQ9 266 aa19.97■□□□□ 0.79
PTPN11-207ENST00000639857 INSL6Q9Y581 213 aa19.97■□□□□ 0.79
PTPN11-207ENST00000639857 NLRC5Q86WI3 1866 aa19.96■□□□□ 0.79
PTPN11-207ENST00000639857 MAGEB2O15479 319 aa19.96■□□□□ 0.79
PTPN11-207ENST00000639857 C22orf31O95567 290 aa19.96■□□□□ 0.79
PTPN11-207ENST00000639857 OATP04181 439 aa19.96■□□□□ 0.79
PTPN11-207ENST00000639857 HTRA4P83105 476 aaPredicted RBP19.96■□□□□ 0.79
PTPN11-207ENST00000639857 ST3GAL1Q11201 340 aa19.96■□□□□ 0.79
PTPN11-207ENST00000639857 MIER3Q7Z3K6 550 aa19.96■□□□□ 0.79
PTPN11-207ENST00000639857 MYOCDQ8IZQ8 938 aa19.96■□□□□ 0.79
PTPN11-207ENST00000639857 SLC17A8Q8NDX2 589 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms