RNA–Protein interactions for RNA: ENST00000638488.1

GFAP-228, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 2,641 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-228ENST00000638488 CALM3P0DP25 149 aa13.22□□□□□ -0.29
GFAP-228ENST00000638488 HNRNPH3P31942 346 aaKnown RBP13.22□□□□□ -0.29
GFAP-228ENST00000638488 RCAN1P53805 252 aa13.22□□□□□ -0.29
GFAP-228ENST00000638488 TNNC1P63316 161 aa13.22□□□□□ -0.29
GFAP-228ENST00000638488 TMTC3Q6ZXV5 915 aa13.22□□□□□ -0.29
GFAP-228ENST00000638488 USP17L1Q7RTZ2 530 aa13.22□□□□□ -0.29
GFAP-228ENST00000638488 IRF2BP1Q8IU81 584 aa13.22□□□□□ -0.29
GFAP-228ENST00000638488 IFT74Q96LB3 600 aa13.22□□□□□ -0.29
GFAP-228ENST00000638488 TRAPPC9Q96Q05 1148 aa13.22□□□□□ -0.29
GFAP-228ENST00000638488 THAP9Q9H5L6 903 aa13.22□□□□□ -0.29
GFAP-228ENST00000638488 GGA1Q9UJY5 639 aa13.22□□□□□ -0.29
GFAP-228ENST00000638488 NOVA2Q9UNW9 492 aaKnown RBP13.22□□□□□ -0.29
GFAP-228ENST00000638488 MYH7BA7E2Y1 1941 aa13.22□□□□□ -0.29
GFAP-228ENST00000638488 RIMBP2O15034 1052 aa13.22□□□□□ -0.29
GFAP-228ENST00000638488 PRPF3O43395 683 aaKnown RBP13.22□□□□□ -0.29
GFAP-228ENST00000638488 BAG3O95817 575 aa13.22□□□□□ -0.29
GFAP-228ENST00000638488 FGRP09769 529 aa13.22□□□□□ -0.29
GFAP-228ENST00000638488 RARAP10276 462 aa13.22□□□□□ -0.29
GFAP-228ENST00000638488 VEGFAP15692 232 aaPredicted RBP13.22□□□□□ -0.29
GFAP-228ENST00000638488 TRIM21P19474 475 aaKnown RBP13.22□□□□□ -0.29
GFAP-228ENST00000638488 KCNJ2P63252 427 aa13.22□□□□□ -0.29
GFAP-228ENST00000638488 FUT2Q10981 343 aa13.22□□□□□ -0.29
GFAP-228ENST00000638488 RNF10Q8N5U6 811 aaKnown RBP13.22□□□□□ -0.29
GFAP-228ENST00000638488 TLCD1Q96CP7 247 aa13.22□□□□□ -0.29
GFAP-228ENST00000638488 RBM17Q96I25 401 aaKnown RBP13.22□□□□□ -0.29
GFAP-228ENST00000638488 PYM1Q9BRP8 204 aaKnown RBP13.22□□□□□ -0.29
GFAP-228ENST00000638488 CD209Q9NNX6 404 aa13.22□□□□□ -0.29
GFAP-228ENST00000638488 AGAP1Q9UPQ3 857 aa13.22□□□□□ -0.29
GFAP-228ENST00000638488 MYH6P13533 1939 aa13.22□□□□□ -0.29
GFAP-228ENST00000638488 CCDC88AQ3V6T2 1871 aa13.21□□□□□ -0.29
GFAP-228ENST00000638488 WNT7AO00755 349 aa13.21□□□□□ -0.29
GFAP-228ENST00000638488 CTNND1O60716 968 aaKnown RBP13.21□□□□□ -0.29
GFAP-228ENST00000638488 PCP11498 1178 aaKnown RBP13.21□□□□□ -0.29
GFAP-228ENST00000638488 CASP1P29466 404 aa13.21□□□□□ -0.29
GFAP-228ENST00000638488 BTDP43251 543 aa13.21□□□□□ -0.29
GFAP-228ENST00000638488 MAGOHP61326 146 aaKnown RBP13.21□□□□□ -0.29
GFAP-228ENST00000638488 PPP2R5BQ15173 497 aa13.21□□□□□ -0.29
GFAP-228ENST00000638488 ZNF174Q15697 407 aa13.21□□□□□ -0.29
GFAP-228ENST00000638488 SPICE1Q8N0Z3 855 aa13.21□□□□□ -0.29
GFAP-228ENST00000638488 MIPOL1Q8TD10 442 aa13.21□□□□□ -0.29
GFAP-228ENST00000638488 MAGOHBQ96A72 148 aaKnown RBP13.21□□□□□ -0.29
GFAP-228ENST00000638488 FERMT2Q96AC1 680 aa13.21□□□□□ -0.29
GFAP-228ENST00000638488 PHF20Q9BVI0 1012 aa13.21□□□□□ -0.29
GFAP-228ENST00000638488 NSRP1Q9H0G5 558 aaKnown RBP13.21□□□□□ -0.29
GFAP-228ENST00000638488 RAB17Q9H0T7 212 aa13.21□□□□□ -0.29
GFAP-228ENST00000638488 CCDC134Q9H6E4 229 aa13.21□□□□□ -0.29
GFAP-228ENST00000638488 ARHGEF3Q9NR81 526 aa13.21□□□□□ -0.29
GFAP-228ENST00000638488 AGPAT5Q9NUQ2 364 aa13.21□□□□□ -0.29
GFAP-228ENST00000638488 ADAM22Q9P0K1 906 aa13.21□□□□□ -0.29
GFAP-228ENST00000638488 BLOC1S6Q9UL45 172 aa13.21□□□□□ -0.29
GFAP-228ENST00000638488 STX8Q9UNK0 236 aa13.21□□□□□ -0.29
GFAP-228ENST00000638488 CNTNAP5Q8WYK1 1306 aa13.21□□□□□ -0.3
GFAP-228ENST00000638488 GOLGB1Q14789 3259 aaKnown RBP13.21□□□□□ -0.3
GFAP-228ENST00000638488 DDAH1O94760 285 aa13.21□□□□□ -0.3
GFAP-228ENST00000638488 TSPY3P0CV98 308 aa13.21□□□□□ -0.3
GFAP-228ENST00000638488 TSPY8P0CW00 308 aa13.21□□□□□ -0.3
GFAP-228ENST00000638488 ADRA2BP18089 450 aa13.21□□□□□ -0.3
GFAP-228ENST00000638488 ATP6V1C1P21283 382 aa13.21□□□□□ -0.3
GFAP-228ENST00000638488 ECHS1P30084 290 aa13.21□□□□□ -0.3
GFAP-228ENST00000638488 NLRP5P59047 1200 aa13.21□□□□□ -0.3
GFAP-228ENST00000638488 ADAM9Q13443 819 aa13.21□□□□□ -0.3
GFAP-228ENST00000638488 GALNTL6Q49A17 601 aa13.21□□□□□ -0.3
GFAP-228ENST00000638488 SBK1Q52WX2 424 aa13.21□□□□□ -0.3
GFAP-228ENST00000638488 FAM133BQ5BKY9 247 aaKnown RBP13.21□□□□□ -0.3
GFAP-228ENST00000638488 C12orf60Q5U649 245 aa13.21□□□□□ -0.3
GFAP-228ENST00000638488 EXOC1Q9NV70 894 aa13.21□□□□□ -0.3
GFAP-228ENST00000638488 SPDYE5A6NIY4 337 aa13.2□□□□□ -0.3
GFAP-228ENST00000638488 IGF2BP3O00425 579 aaKnown RBP eCLIP13.2□□□□□ -0.3
GFAP-228ENST00000638488 GTPBP6O43824 516 aaPredicted RBP13.2□□□□□ -0.3
GFAP-228ENST00000638488 CREB3O43889 395 aa13.2□□□□□ -0.3
GFAP-228ENST00000638488 ONECUT3O60422 494 aaPredicted RBP13.2□□□□□ -0.3
GFAP-228ENST00000638488 BMP15O95972 392 aa13.2□□□□□ -0.3
GFAP-228ENST00000638488 MSH2P43246 934 aa13.2□□□□□ -0.3
GFAP-228ENST00000638488 GSTO1P78417 241 aa13.2□□□□□ -0.3
GFAP-228ENST00000638488 MFSD14BQ5SR56 506 aa13.2□□□□□ -0.3
GFAP-228ENST00000638488 KLHDC7AQ5VTJ3 777 aa13.2□□□□□ -0.3
GFAP-228ENST00000638488 KRT27Q7Z3Y8 459 aa13.2□□□□□ -0.3
GFAP-228ENST00000638488 ZNF444Q8N0Y2 327 aaPredicted RBP13.2□□□□□ -0.3
GFAP-228ENST00000638488 CERKQ8TCT0 537 aa13.2□□□□□ -0.3
GFAP-228ENST00000638488 NOX5Q96PH1 765 aa13.2□□□□□ -0.3
GFAP-228ENST00000638488 PSMB7Q99436 277 aa13.2□□□□□ -0.3
GFAP-228ENST00000638488 KRT12Q99456 494 aa13.2□□□□□ -0.3
GFAP-228ENST00000638488 ECT2Q9H8V3 914 aa13.2□□□□□ -0.3
GFAP-228ENST00000638488 IL17RBQ9NRM6 502 aa13.2□□□□□ -0.3
GFAP-228ENST00000638488 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.2□□□□□ -0.3
GFAP-228ENST00000638488 TRIM75PA6NK02 468 aa13.2□□□□□ -0.3
GFAP-228ENST00000638488 BHMG1C9JSJ3 638 aaPredicted RBP13.2□□□□□ -0.3
GFAP-228ENST00000638488 GNAQP50148 359 aa13.2□□□□□ -0.3
GFAP-228ENST00000638488 EIF3BP55884 814 aaKnown RBP13.2□□□□□ -0.3
GFAP-228ENST00000638488 SPDYCQ5MJ68 293 aa13.2□□□□□ -0.3
GFAP-228ENST00000638488 SESTD1Q86VW0 696 aa13.2□□□□□ -0.3
GFAP-228ENST00000638488 STAG2Q8N3U4 1231 aa13.2□□□□□ -0.3
GFAP-228ENST00000638488 OR2W6PQ8NHA6 318 aa13.2□□□□□ -0.3
GFAP-228ENST00000638488 SYMPKQ92797 1274 aaKnown RBP13.2□□□□□ -0.3
GFAP-228ENST00000638488 GPKOWQ92917 476 aaPredicted RBP eCLIP13.2□□□□□ -0.3
GFAP-228ENST00000638488 VCXQ9H320 206 aa13.2□□□□□ -0.3
GFAP-228ENST00000638488 MAGEC2Q9UBF1 373 aaPredicted RBP13.2□□□□□ -0.3
GFAP-228ENST00000638488 POLLQ9UGP5 575 aa13.2□□□□□ -0.3
GFAP-228ENST00000638488 NCK2O43639 380 aa13.19□□□□□ -0.3
GFAP-228ENST00000638488 HIP1RO75146 1068 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms