RNA–Protein interactions for RNA: ENST00000638144.1

CLN6-225, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 576 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-225ENST00000638144 MARCH6O60337 910 aa14.12□□□□□ -0.15
CLN6-225ENST00000638144 NBNO60934 754 aa14.12□□□□□ -0.15
CLN6-225ENST00000638144 GNAT1P11488 350 aa14.12□□□□□ -0.15
CLN6-225ENST00000638144 MCM7P33993 719 aa14.12□□□□□ -0.15
CLN6-225ENST00000638144 PRKCEQ02156 737 aa14.12□□□□□ -0.15
CLN6-225ENST00000638144 MCTP1Q6DN14 999 aa14.12□□□□□ -0.15
CLN6-225ENST00000638144 PPP4R3AQ6IN85 833 aa14.12□□□□□ -0.15
CLN6-225ENST00000638144 BANK1Q8NDB2 785 aa14.12□□□□□ -0.15
CLN6-225ENST00000638144 ATP8B4Q8TF62 1192 aa14.12□□□□□ -0.15
CLN6-225ENST00000638144 SMC3Q9UQE7 1217 aa14.12□□□□□ -0.15
CLN6-225ENST00000638144 ZBTB42B2RXF5 422 aa14.11□□□□□ -0.15
CLN6-225ENST00000638144 FGBP02675 491 aa14.11□□□□□ -0.15
CLN6-225ENST00000638144 JAK3P52333 1124 aa14.11□□□□□ -0.15
CLN6-225ENST00000638144 RBL2Q08999 1139 aa14.11□□□□□ -0.15
CLN6-225ENST00000638144 TMEM62Q0P6H9 643 aa14.11□□□□□ -0.15
CLN6-225ENST00000638144 ZNF174Q15697 407 aa14.11□□□□□ -0.15
CLN6-225ENST00000638144 LRIT3Q3SXY7 679 aa14.11□□□□□ -0.15
CLN6-225ENST00000638144 NCAPH2Q6IBW4 605 aa14.11□□□□□ -0.15
CLN6-225ENST00000638144 B3GNT9Q6UX72 402 aa14.11□□□□□ -0.15
CLN6-225ENST00000638144 NOSTRINQ8IVI9 506 aa14.11□□□□□ -0.15
CLN6-225ENST00000638144 DNAJB3Q8WWF6 145 aa14.11□□□□□ -0.15
CLN6-225ENST00000638144 PPP1R16BQ96T49 567 aa14.11□□□□□ -0.15
CLN6-225ENST00000638144 SH2D3AQ9BRG2 576 aa14.11□□□□□ -0.15
CLN6-225ENST00000638144 TMEM60Q9H2L4 133 aa14.11□□□□□ -0.15
CLN6-225ENST00000638144 FOXP1Q9H334 677 aaPredicted RBP14.11□□□□□ -0.15
CLN6-225ENST00000638144 MAFBQ9Y5Q3 323 aaPredicted RBP14.11□□□□□ -0.15
CLN6-225ENST00000638144 MBLAC1A4D2B0 266 aaPredicted RBP14.1□□□□□ -0.15
CLN6-225ENST00000638144 RSPH10B2B2RC85 870 aa14.1□□□□□ -0.15
CLN6-225ENST00000638144 NEMFO60524 1076 aa14.1□□□□□ -0.15
CLN6-225ENST00000638144 RSPH10BP0C881 870 aa14.1□□□□□ -0.15
CLN6-225ENST00000638144 SFNP31947 248 aa14.1□□□□□ -0.15
CLN6-225ENST00000638144 CALCRLQ16602 461 aa14.1□□□□□ -0.15
CLN6-225ENST00000638144 Q7L0L9 218 aa14.1□□□□□ -0.15
CLN6-225ENST00000638144 RPUSD2Q8IZ73 545 aaKnown RBP14.1□□□□□ -0.15
CLN6-225ENST00000638144 HERVK_113Q902F9 699 aa14.1□□□□□ -0.15
CLN6-225ENST00000638144 FAM20AQ96MK3 541 aa14.1□□□□□ -0.15
CLN6-225ENST00000638144 NAP1L4Q99733 375 aaKnown RBP14.1□□□□□ -0.15
CLN6-225ENST00000638144 MICAL3Q7RTP6 2002 aa14.09□□□□□ -0.15
CLN6-225ENST00000638144 RRN3P2A6NIE6 340 aa14.09□□□□□ -0.15
CLN6-225ENST00000638144 H3BQV1 296 aa14.09□□□□□ -0.15
CLN6-225ENST00000638144 HBP1O60381 514 aa14.09□□□□□ -0.15
CLN6-225ENST00000638144 OATP04181 439 aa14.09□□□□□ -0.15
CLN6-225ENST00000638144 RFC2P35250 354 aa14.09□□□□□ -0.15
CLN6-225ENST00000638144 TXKP42681 527 aa14.09□□□□□ -0.15
CLN6-225ENST00000638144 SLC26A2P50443 739 aa14.09□□□□□ -0.15
CLN6-225ENST00000638144 SPIRE1Q08AE8 756 aa14.09□□□□□ -0.15
CLN6-225ENST00000638144 PPP2R5CQ13362 524 aa14.09□□□□□ -0.15
CLN6-225ENST00000638144 CUL4AQ13619 759 aa14.09□□□□□ -0.15
CLN6-225ENST00000638144 TTC38Q5R3I4 469 aa14.09□□□□□ -0.15
CLN6-225ENST00000638144 RASIP1Q5U651 963 aa14.09□□□□□ -0.15
CLN6-225ENST00000638144 MTHFD1LQ6UB35 978 aa14.09□□□□□ -0.15
CLN6-225ENST00000638144 TMCO2Q7Z6W1 182 aaPredicted RBP14.09□□□□□ -0.15
CLN6-225ENST00000638144 BBXQ8WY36 941 aaPredicted RBP14.09□□□□□ -0.15
CLN6-225ENST00000638144 SEPT9Q9UHD8 586 aaPredicted RBP14.09□□□□□ -0.15
CLN6-225ENST00000638144 KIF3AQ9Y496 699 aa14.09□□□□□ -0.15
CLN6-225ENST00000638144 ARID2Q68CP9 1835 aa14.08□□□□□ -0.15
CLN6-225ENST00000638144 POTEMA6NI47 508 aa14.08□□□□□ -0.16
CLN6-225ENST00000638144 TBX3O15119 743 aa14.08□□□□□ -0.16
CLN6-225ENST00000638144 BAG4O95429 457 aaKnown RBP14.08□□□□□ -0.16
CLN6-225ENST00000638144 C22orf31O95567 290 aa14.08□□□□□ -0.16
CLN6-225ENST00000638144 CHRNA1P02708 482 aa14.08□□□□□ -0.16
CLN6-225ENST00000638144 GHRP10912 638 aa14.08□□□□□ -0.16
CLN6-225ENST00000638144 KLRC1P26715 233 aa14.08□□□□□ -0.16
CLN6-225ENST00000638144 PBX2P40425 430 aa14.08□□□□□ -0.16
CLN6-225ENST00000638144 CYP4A11Q02928 519 aa14.08□□□□□ -0.16
CLN6-225ENST00000638144 PLA2G4FQ68DD2 849 aa14.08□□□□□ -0.16
CLN6-225ENST00000638144 TAF2Q6P1X5 1199 aa14.08□□□□□ -0.16
CLN6-225ENST00000638144 IL27Q8NEV9 243 aa14.08□□□□□ -0.16
CLN6-225ENST00000638144 FAM161BQ96MY7 647 aa14.08□□□□□ -0.16
CLN6-225ENST00000638144 RGL1Q9NZL6 768 aa14.08□□□□□ -0.16
CLN6-225ENST00000638144 WRAP73Q9P2S5 460 aaPredicted RBP14.08□□□□□ -0.16
CLN6-225ENST00000638144 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.08□□□□□ -0.16
CLN6-225ENST00000638144 CDY2AQ9Y6F7 541 aa14.08□□□□□ -0.16
CLN6-225ENST00000638144 MYO9BQ13459 2157 aa14.07□□□□□ -0.16
CLN6-225ENST00000638144 VPS37CA5D8V6 355 aaPredicted RBP14.07□□□□□ -0.16
CLN6-225ENST00000638144 K7ELQ4 463 aaPredicted RBP14.07□□□□□ -0.16
CLN6-225ENST00000638144 CXCL10P02778 98 aa14.07□□□□□ -0.16
CLN6-225ENST00000638144 PFKMP08237 780 aa14.07□□□□□ -0.16
CLN6-225ENST00000638144 U2AF2P26368 475 aaKnown RBP eCLIP14.07□□□□□ -0.16
CLN6-225ENST00000638144 TOB1P50616 345 aaPredicted RBP14.07□□□□□ -0.16
CLN6-225ENST00000638144 CLCN3P51790 818 aa14.07□□□□□ -0.16
CLN6-225ENST00000638144 RABGGTBP53611 331 aa14.07□□□□□ -0.16
CLN6-225ENST00000638144 MRPS6P82932 125 aaKnown RBP14.07□□□□□ -0.16
CLN6-225ENST00000638144 CTTNQ14247 550 aaKnown RBP14.07□□□□□ -0.16
CLN6-225ENST00000638144 MTERF2Q49AM1 385 aa14.07□□□□□ -0.16
CLN6-225ENST00000638144 ZNF484Q5JVG2 852 aa14.07□□□□□ -0.16
CLN6-225ENST00000638144 LARP1BQ659C4 914 aaKnown RBP14.07□□□□□ -0.16
CLN6-225ENST00000638144 SLFN12Q8IYM2 578 aa14.07□□□□□ -0.16
CLN6-225ENST00000638144 LRRC71Q8N4P6 559 aa14.07□□□□□ -0.16
CLN6-225ENST00000638144 METTL13Q8N6R0 699 aa14.07□□□□□ -0.16
CLN6-225ENST00000638144 RDM1Q8NG50 284 aa14.07□□□□□ -0.16
CLN6-225ENST00000638144 DYDC2Q96IM9 177 aa14.07□□□□□ -0.16
CLN6-225ENST00000638144 ZNF668Q96K58 619 aaPredicted RBP14.07□□□□□ -0.16
CLN6-225ENST00000638144 FAM167AQ96KS9 214 aa14.07□□□□□ -0.16
CLN6-225ENST00000638144 MTMR9Q96QG7 549 aa14.07□□□□□ -0.16
CLN6-225ENST00000638144 TTC12Q9H892 705 aaPredicted RBP14.07□□□□□ -0.16
CLN6-225ENST00000638144 CHD7Q9P2D1 2997 aa14.07□□□□□ -0.16
CLN6-225ENST00000638144 GINS2Q9Y248 185 aa14.07□□□□□ -0.16
CLN6-225ENST00000638144 PCDHB6Q9Y5E3 794 aa14.07□□□□□ -0.16
CLN6-225ENST00000638144 PCDHA2Q9Y5H9 948 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms