RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 IFT88Q13099 833 aa18.26■□□□□ 0.51
CACNA1A-253ENST00000637927 TFDP1Q14186 410 aa18.26■□□□□ 0.51
CACNA1A-253ENST00000637927 ANTXR1Q9H6X2 564 aa18.26■□□□□ 0.51
CACNA1A-253ENST00000637927 MCF2LO15068 1137 aa18.26■□□□□ 0.51
CACNA1A-253ENST00000637927 AFPP02771 609 aaKnown RBP18.26■□□□□ 0.51
CACNA1A-253ENST00000637927 MAP3K21Q5TCX8 1036 aa18.26■□□□□ 0.51
CACNA1A-253ENST00000637927 BBOF1Q8ND07 529 aa18.26■□□□□ 0.51
CACNA1A-253ENST00000637927 SLC10A4Q96EP9 437 aa18.26■□□□□ 0.51
CACNA1A-253ENST00000637927 FSD1LQ9BXM9 530 aa18.26■□□□□ 0.51
CACNA1A-253ENST00000637927 MIS12Q9H081 205 aa18.26■□□□□ 0.51
CACNA1A-253ENST00000637927 RERGLQ9H628 205 aa18.26■□□□□ 0.51
CACNA1A-253ENST00000637927 KIAA1468Q9P260 1216 aa18.26■□□□□ 0.51
CACNA1A-253ENST00000637927 LZTS1Q9Y250 596 aa18.26■□□□□ 0.51
CACNA1A-253ENST00000637927 SOS2Q07890 1332 aaPredicted RBP18.26■□□□□ 0.51
CACNA1A-253ENST00000637927 NPM3O75607 178 aaKnown RBP18.26■□□□□ 0.51
CACNA1A-253ENST00000637927 DDX5P17844 614 aaKnown RBP18.26■□□□□ 0.51
CACNA1A-253ENST00000637927 RXRBP28702 533 aa18.26■□□□□ 0.51
CACNA1A-253ENST00000637927 CYP27A1Q02318 531 aa18.26■□□□□ 0.51
CACNA1A-253ENST00000637927 CTTNQ14247 550 aaKnown RBP18.26■□□□□ 0.51
CACNA1A-253ENST00000637927 PPIEQ9UNP9 301 aaKnown RBP18.26■□□□□ 0.51
CACNA1A-253ENST00000637927 DFFAO00273 331 aa18.25■□□□□ 0.51
CACNA1A-253ENST00000637927 ARL4AP40617 200 aa18.25■□□□□ 0.51
CACNA1A-253ENST00000637927 MLXIPLQ9NP71 852 aa18.25■□□□□ 0.51
CACNA1A-253ENST00000637927 CSE1LP55060 971 aaKnown RBP18.25■□□□□ 0.51
CACNA1A-253ENST00000637927 TESK2Q96S53 571 aa18.25■□□□□ 0.51
CACNA1A-253ENST00000637927 PPP2R2CQ9Y2T4 447 aa18.25■□□□□ 0.51
CACNA1A-253ENST00000637927 FTCDO95954 541 aa18.25■□□□□ 0.51
CACNA1A-253ENST00000637927 PLTPP55058 493 aa18.25■□□□□ 0.51
CACNA1A-253ENST00000637927 SGO2Q562F6 1265 aa18.25■□□□□ 0.51
CACNA1A-253ENST00000637927 CCDC84Q86UT8 332 aaPredicted RBP18.25■□□□□ 0.51
CACNA1A-253ENST00000637927 CCDC124Q96CT7 223 aaKnown RBP18.25■□□□□ 0.51
CACNA1A-253ENST00000637927 COL4A3BPQ9Y5P4 624 aa18.25■□□□□ 0.51
CACNA1A-253ENST00000637927 ATG16L1Q676U5 607 aa18.25■□□□□ 0.51
CACNA1A-253ENST00000637927 ANKRD49Q8WVL7 239 aa18.25■□□□□ 0.51
CACNA1A-253ENST00000637927 ATP8B3O60423 1300 aa18.24■□□□□ 0.51
CACNA1A-253ENST00000637927 FAM47DPA6NHR8 397 aa18.24■□□□□ 0.51
CACNA1A-253ENST00000637927 FAM133AQ8N9E0 248 aa18.24■□□□□ 0.51
CACNA1A-253ENST00000637927 OR8K1Q8NGG5 319 aa18.24■□□□□ 0.51
CACNA1A-253ENST00000637927 ADAM33Q9BZ11 813 aa18.24■□□□□ 0.51
CACNA1A-253ENST00000637927 LRRC53A6NM62 1247 aa18.24■□□□□ 0.51
CACNA1A-253ENST00000637927 GRAMD1BQ3KR37 738 aa18.24■□□□□ 0.51
CACNA1A-253ENST00000637927 PRR23CQ6ZRP0 262 aa18.24■□□□□ 0.51
CACNA1A-253ENST00000637927 STAT2P52630 851 aa18.24■□□□□ 0.51
CACNA1A-253ENST00000637927 PCDHA7Q9UN72 937 aa18.24■□□□□ 0.51
CACNA1A-253ENST00000637927 HYOU1Q9Y4L1 999 aa18.24■□□□□ 0.51
CACNA1A-253ENST00000637927 MAP3K15Q6ZN16 1313 aa18.24■□□□□ 0.51
CACNA1A-253ENST00000637927 TTLL1O95922 423 aa18.24■□□□□ 0.51
CACNA1A-253ENST00000637927 VN1R5Q7Z5H4 357 aa18.24■□□□□ 0.51
CACNA1A-253ENST00000637927 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.24■□□□□ 0.51
CACNA1A-253ENST00000637927 CCT5P48643 541 aa18.24■□□□□ 0.51
CACNA1A-253ENST00000637927 TBCKQ8TEA7 893 aa18.24■□□□□ 0.51
CACNA1A-253ENST00000637927 FAF2Q96CS3 445 aa18.24■□□□□ 0.51
CACNA1A-253ENST00000637927 MAPKBP1O60336 1514 aa18.24■□□□□ 0.51
CACNA1A-253ENST00000637927 IMPDH2P12268 514 aa18.23■□□□□ 0.51
CACNA1A-253ENST00000637927 NR2F2P24468 414 aa18.23■□□□□ 0.51
CACNA1A-253ENST00000637927 MFAP3P55082 362 aa18.23■□□□□ 0.51
CACNA1A-253ENST00000637927 PTK2Q05397 1052 aa18.23■□□□□ 0.51
CACNA1A-253ENST00000637927 C16orf87Q6PH81 154 aa18.23■□□□□ 0.51
CACNA1A-253ENST00000637927 ASIC4Q96FT7 647 aa18.23■□□□□ 0.51
CACNA1A-253ENST00000637927 SIK2Q9H0K1 926 aa18.23■□□□□ 0.51
CACNA1A-253ENST00000637927 SPDYE5A6NIY4 337 aa18.23■□□□□ 0.51
CACNA1A-253ENST00000637927 C21orf2O43822 256 aa18.23■□□□□ 0.51
CACNA1A-253ENST00000637927 SPAG7O75391 227 aa18.23■□□□□ 0.51
CACNA1A-253ENST00000637927 SLFNL1Q499Z3 407 aa18.23■□□□□ 0.51
CACNA1A-253ENST00000637927 POTEDQ86YR6 584 aa18.23■□□□□ 0.51
CACNA1A-253ENST00000637927 KCNV2Q8TDN2 545 aa18.23■□□□□ 0.51
CACNA1A-253ENST00000637927 SPON2Q9BUD6 331 aa18.23■□□□□ 0.51
CACNA1A-253ENST00000637927 FBXO2Q9UK22 296 aaPredicted RBP18.23■□□□□ 0.51
CACNA1A-253ENST00000637927 TCEA2Q15560 299 aa18.23■□□□□ 0.51
CACNA1A-253ENST00000637927 RBL2Q08999 1139 aa18.23■□□□□ 0.51
CACNA1A-253ENST00000637927 AP1B1Q10567 949 aa18.23■□□□□ 0.51
CACNA1A-253ENST00000637927 TRIM58Q8NG06 486 aa18.23■□□□□ 0.51
CACNA1A-253ENST00000637927 HPCAL4Q9UM19 191 aa18.23■□□□□ 0.51
CACNA1A-253ENST00000637927 PRPSAP2O60256 369 aa18.23■□□□□ 0.51
CACNA1A-253ENST00000637927 DCTN3O75935 186 aa18.23■□□□□ 0.51
CACNA1A-253ENST00000637927 ZNF589Q86UQ0 364 aaPredicted RBP18.23■□□□□ 0.51
CACNA1A-253ENST00000637927 NRBP1Q9UHY1 535 aa18.23■□□□□ 0.51
CACNA1A-253ENST00000637927 ARHGEF10O15013 1369 aa18.23■□□□□ 0.51
CACNA1A-253ENST00000637927 SUPT3HO75486 399 aa18.23■□□□□ 0.51
CACNA1A-253ENST00000637927 SPDYE7PQ495Y7 208 aa18.23■□□□□ 0.51
CACNA1A-253ENST00000637927 RGS9BPQ6ZS82 235 aa18.23■□□□□ 0.51
CACNA1A-253ENST00000637927 LCORLQ8N3X6 602 aa18.23■□□□□ 0.51
CACNA1A-253ENST00000637927 ZBTB1Q9Y2K1 713 aa18.23■□□□□ 0.51
CACNA1A-253ENST00000637927 EIF2AK2P19525 551 aaKnown RBP18.22■□□□□ 0.51
CACNA1A-253ENST00000637927 DYRK4Q9NR20 520 aa18.22■□□□□ 0.51
CACNA1A-253ENST00000637927 SCAF8Q9UPN6 1271 aaKnown RBP18.22■□□□□ 0.51
CACNA1A-253ENST00000637927 CASP14P31944 242 aa18.22■□□□□ 0.51
CACNA1A-253ENST00000637927 FAM26FQ5R3K3 315 aa18.22■□□□□ 0.51
CACNA1A-253ENST00000637927 THNSL1Q8IYQ7 743 aa18.22■□□□□ 0.51
CACNA1A-253ENST00000637927 NAF1Q96HR8 494 aaKnown RBP18.22■□□□□ 0.51
CACNA1A-253ENST00000637927 RGL1Q9NZL6 768 aa18.22■□□□□ 0.51
CACNA1A-253ENST00000637927 HNRNPCP07910 306 aaKnown RBP eCLIP18.22■□□□□ 0.51
CACNA1A-253ENST00000637927 PDIA3P30101 505 aaKnown RBP18.22■□□□□ 0.51
CACNA1A-253ENST00000637927 BBS9Q3SYG4 887 aa18.22■□□□□ 0.51
CACNA1A-253ENST00000637927 ANKRD40Q6AI12 368 aa18.22■□□□□ 0.51
CACNA1A-253ENST00000637927 TTC17Q96AE7 1141 aa18.22■□□□□ 0.51
CACNA1A-253ENST00000637927 ZNF341Q9BYN7 854 aa18.22■□□□□ 0.51
CACNA1A-253ENST00000637927 DMAP1Q9NPF5 467 aaPredicted RBP18.22■□□□□ 0.51
CACNA1A-253ENST00000637927 PCDHA4Q9UN74 947 aa18.22■□□□□ 0.51
CACNA1A-253ENST00000637927 FAN1Q9Y2M0 1017 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms