RNA–Protein interactions for RNA: ENST00000636681.1

CLN5-213, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 1,791 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-213ENST00000636681 HAUS3Q68CZ6 603 aa11.92□□□□□ -0.5
CLN5-213ENST00000636681 ISM2Q6H9L7 571 aa11.92□□□□□ -0.5
CLN5-213ENST00000636681 MIS18BP1Q6P0N0 1132 aa11.92□□□□□ -0.5
CLN5-213ENST00000636681 SMAP1Q8IYB5 467 aaPredicted RBP11.92□□□□□ -0.5
CLN5-213ENST00000636681 CNNM3Q8NE01 707 aa11.92□□□□□ -0.5
CLN5-213ENST00000636681 PPTC7Q8NI37 304 aa11.92□□□□□ -0.5
CLN5-213ENST00000636681 TRAPPC12Q8WVT3 735 aa11.92□□□□□ -0.5
CLN5-213ENST00000636681 BHMT2Q9H2M3 363 aa11.92□□□□□ -0.5
CLN5-213ENST00000636681 RNPEPQ9H4A4 650 aa11.92□□□□□ -0.5
CLN5-213ENST00000636681 CLSTN2Q9H4D0 955 aa11.92□□□□□ -0.5
CLN5-213ENST00000636681 TUFT1Q9NNX1 390 aa11.92□□□□□ -0.5
CLN5-213ENST00000636681 CCDC39Q9UFE4 941 aa11.92□□□□□ -0.5
CLN5-213ENST00000636681 MAFBQ9Y5Q3 323 aaPredicted RBP11.92□□□□□ -0.5
CLN5-213ENST00000636681 IGSF9BQ9UPX0 1349 aa11.92□□□□□ -0.5
CLN5-213ENST00000636681 MYMKA6NI61 221 aa11.91□□□□□ -0.5
CLN5-213ENST00000636681 LGR5O75473 907 aa11.91□□□□□ -0.5
CLN5-213ENST00000636681 SLFN14P0C7P3 912 aa11.91□□□□□ -0.5
CLN5-213ENST00000636681 PLA2G4BP0C869 781 aa11.91□□□□□ -0.5
CLN5-213ENST00000636681 STAT5BP51692 787 aa11.91□□□□□ -0.5
CLN5-213ENST00000636681 PSMC5P62195 406 aa11.91□□□□□ -0.5
CLN5-213ENST00000636681 ARHGEF6Q15052 776 aa11.91□□□□□ -0.5
CLN5-213ENST00000636681 SLC9C1Q4G0N8 1177 aa11.91□□□□□ -0.5
CLN5-213ENST00000636681 ARSHQ5FYA8 562 aa11.91□□□□□ -0.5
CLN5-213ENST00000636681 LHX8Q68G74 356 aa11.91□□□□□ -0.5
CLN5-213ENST00000636681 DYMQ7RTS9 669 aa11.91□□□□□ -0.5
CLN5-213ENST00000636681 SH3RF1Q7Z6J0 888 aa11.91□□□□□ -0.5
CLN5-213ENST00000636681 CTU1Q7Z7A3 348 aaKnown RBP11.91□□□□□ -0.5
CLN5-213ENST00000636681 TRMT44Q8IYL2 757 aaKnown RBP11.91□□□□□ -0.5
CLN5-213ENST00000636681 IQUBQ8NA54 791 aa11.91□□□□□ -0.5
CLN5-213ENST00000636681 LARP4BQ92615 738 aaKnown RBP11.91□□□□□ -0.5
CLN5-213ENST00000636681 GLG1Q92896 1179 aa11.91□□□□□ -0.5
CLN5-213ENST00000636681 EMID1Q96A84 441 aaPredicted RBP11.91□□□□□ -0.5
CLN5-213ENST00000636681 C16orf70Q9BSU1 422 aa11.91□□□□□ -0.5
CLN5-213ENST00000636681 RUSC1Q9BVN2 902 aa11.91□□□□□ -0.5
CLN5-213ENST00000636681 SCN10AQ9Y5Y9 1956 aa11.91□□□□□ -0.5
CLN5-213ENST00000636681 KDM3AQ9Y4C1 1321 aa11.9□□□□□ -0.5
CLN5-213ENST00000636681 A6NJR5 290 aa11.9□□□□□ -0.5
CLN5-213ENST00000636681 ADAMTS4O75173 837 aa11.9□□□□□ -0.5
CLN5-213ENST00000636681 DUSP11O75319 330 aaKnown RBP11.9□□□□□ -0.5
CLN5-213ENST00000636681 MYL3P08590 195 aa11.9□□□□□ -0.5
CLN5-213ENST00000636681 SLC12A3P55017 1021 aa11.9□□□□□ -0.5
CLN5-213ENST00000636681 PRMT2P55345 433 aa11.9□□□□□ -0.5
CLN5-213ENST00000636681 PLCB4Q15147 1175 aa11.9□□□□□ -0.5
CLN5-213ENST00000636681 FSCN1Q16658 493 aaKnown RBP11.9□□□□□ -0.5
CLN5-213ENST00000636681 MAEAQ7L5Y9 396 aa11.9□□□□□ -0.5
CLN5-213ENST00000636681 KAT2BQ92831 832 aa11.9□□□□□ -0.5
CLN5-213ENST00000636681 HPS3Q969F9 1004 aa11.9□□□□□ -0.5
CLN5-213ENST00000636681 NUP62CLQ9H1M0 184 aa11.9□□□□□ -0.5
CLN5-213ENST00000636681 ZSWIM4Q9H7M6 989 aa11.9□□□□□ -0.5
CLN5-213ENST00000636681 SEPT9Q9UHD8 586 aaPredicted RBP11.9□□□□□ -0.5
CLN5-213ENST00000636681 DDX20Q9UHI6 824 aaKnown RBP11.9□□□□□ -0.5
CLN5-213ENST00000636681 RSPH10B2B2RC85 870 aa11.9□□□□□ -0.51
CLN5-213ENST00000636681 BIN1O00499 593 aa11.9□□□□□ -0.51
CLN5-213ENST00000636681 NKRFO15226 690 aaKnown RBP eCLIP11.9□□□□□ -0.51
CLN5-213ENST00000636681 RSPH10BP0C881 870 aa11.9□□□□□ -0.51
CLN5-213ENST00000636681 YWHABP31946 246 aaKnown RBP11.9□□□□□ -0.51
CLN5-213ENST00000636681 GJA9P57773 515 aa11.9□□□□□ -0.51
CLN5-213ENST00000636681 HIC1Q14526 733 aa11.9□□□□□ -0.51
CLN5-213ENST00000636681 MTERF2Q49AM1 385 aa11.9□□□□□ -0.51
CLN5-213ENST00000636681 CEP57L1Q8IYX8 460 aa11.9□□□□□ -0.51
CLN5-213ENST00000636681 RDM1Q8NG50 284 aa11.9□□□□□ -0.51
CLN5-213ENST00000636681 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.9□□□□□ -0.51
CLN5-213ENST00000636681 NT5C3AQ9H0P0 336 aa11.9□□□□□ -0.51
CLN5-213ENST00000636681 AP5M1Q9H0R1 490 aa11.9□□□□□ -0.51
CLN5-213ENST00000636681 HMX1Q9NP08 348 aaPredicted RBP11.9□□□□□ -0.51
CLN5-213ENST00000636681 XPNPEP3Q9NQH7 507 aa11.9□□□□□ -0.51
CLN5-213ENST00000636681 KBTBD4Q9NVX7 518 aa11.9□□□□□ -0.51
CLN5-213ENST00000636681 NRBP1Q9UHY1 535 aa11.9□□□□□ -0.51
CLN5-213ENST00000636681 DNM3Q9UQ16 869 aa11.9□□□□□ -0.51
CLN5-213ENST00000636681 EMSYQ7Z589 1322 aa11.89□□□□□ -0.51
CLN5-213ENST00000636681 SYCE3A1L190 88 aa11.89□□□□□ -0.51
CLN5-213ENST00000636681 SFI1A8K8P3 1242 aa11.89□□□□□ -0.51
CLN5-213ENST00000636681 ZBTB42B2RXF5 422 aa11.89□□□□□ -0.51
CLN5-213ENST00000636681 EYA4O95677 639 aa11.89□□□□□ -0.51
CLN5-213ENST00000636681 OATP04181 439 aa11.89□□□□□ -0.51
CLN5-213ENST00000636681 RARBP10826 455 aa11.89□□□□□ -0.51
CLN5-213ENST00000636681 HOXD8P13378 290 aaPredicted RBP11.89□□□□□ -0.51
CLN5-213ENST00000636681 CCL5P13501 91 aa11.89□□□□□ -0.51
CLN5-213ENST00000636681 CYP11B2P19099 503 aa11.89□□□□□ -0.51
CLN5-213ENST00000636681 RARRES1P49788 294 aa11.89□□□□□ -0.51
CLN5-213ENST00000636681 POSTNQ15063 836 aa11.89□□□□□ -0.51
CLN5-213ENST00000636681 XKR9Q5GH70 373 aa11.89□□□□□ -0.51
CLN5-213ENST00000636681 GNASQ5JWF2 1037 aa11.89□□□□□ -0.51
CLN5-213ENST00000636681 CCDC183Q5T5S1 534 aa11.89□□□□□ -0.51
CLN5-213ENST00000636681 CXCL17Q6UXB2 119 aa11.89□□□□□ -0.51
CLN5-213ENST00000636681 GPBP1Q86WP2 473 aa11.89□□□□□ -0.51
CLN5-213ENST00000636681 C4orf19Q8IY42 314 aa11.89□□□□□ -0.51
CLN5-213ENST00000636681 AFAP1L1Q8TED9 768 aa11.89□□□□□ -0.51
CLN5-213ENST00000636681 CEP89Q96ST8 783 aa11.89□□□□□ -0.51
CLN5-213ENST00000636681 UPF3AQ9H1J1 476 aaKnown RBP11.89□□□□□ -0.51
CLN5-213ENST00000636681 TNMDQ9H2S6 317 aa11.89□□□□□ -0.51
CLN5-213ENST00000636681 STK17AQ9UEE5 414 aa11.89□□□□□ -0.51
CLN5-213ENST00000636681 PCDHA5Q9Y5H7 936 aa11.89□□□□□ -0.51
CLN5-213ENST00000636681 H3BRB1 525 aa11.88□□□□□ -0.51
CLN5-213ENST00000636681 USO1O60763 962 aaKnown RBP11.88□□□□□ -0.51
CLN5-213ENST00000636681 PPFIA4O75335 1185 aa11.88□□□□□ -0.51
CLN5-213ENST00000636681 IGBP1P78318 339 aa11.88□□□□□ -0.51
CLN5-213ENST00000636681 DPYDQ12882 1025 aa11.88□□□□□ -0.51
CLN5-213ENST00000636681 DGKDQ16760 1214 aa11.88□□□□□ -0.51
CLN5-213ENST00000636681 ZSCAN23Q3MJ62 389 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms