RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 FAM228AQ86W67 206 aa16.14■□□□□ 0.17
CACNA1A-220ENST00000635988 NEDD1Q8NHV4 660 aa16.14■□□□□ 0.17
CACNA1A-220ENST00000635988 SH3RF3Q8TEJ3 882 aaPredicted RBP16.14■□□□□ 0.17
CACNA1A-220ENST00000635988 MIEF2Q96C03 454 aa16.14■□□□□ 0.17
CACNA1A-220ENST00000635988 FMO2Q99518 471 aa16.14■□□□□ 0.17
CACNA1A-220ENST00000635988 KCTD10Q9H3F6 313 aa16.14■□□□□ 0.17
CACNA1A-220ENST00000635988 RIOX1Q9H6W3 641 aa16.14■□□□□ 0.17
CACNA1A-220ENST00000635988 VAT1LQ9HCJ6 419 aa16.14■□□□□ 0.17
CACNA1A-220ENST00000635988 EMILIN3Q9NT22 766 aa16.14■□□□□ 0.17
CACNA1A-220ENST00000635988 STXBP5LQ9Y2K9 1186 aa16.14■□□□□ 0.17
CACNA1A-220ENST00000635988 A0A1B0GUA9 196 aa16.14■□□□□ 0.17
CACNA1A-220ENST00000635988 PHF20L1A8MW92 1017 aa16.14■□□□□ 0.17
CACNA1A-220ENST00000635988 ASAP2O43150 1006 aa16.14■□□□□ 0.17
CACNA1A-220ENST00000635988 PPIP5K2O43314 1243 aa16.14■□□□□ 0.17
CACNA1A-220ENST00000635988 LDHBP07195 334 aaKnown RBP16.14■□□□□ 0.17
CACNA1A-220ENST00000635988 UCHL3P15374 230 aa16.14■□□□□ 0.17
CACNA1A-220ENST00000635988 RPS8P62241 208 aaKnown RBP16.14■□□□□ 0.17
CACNA1A-220ENST00000635988 ITIH4Q14624 930 aa16.14■□□□□ 0.17
CACNA1A-220ENST00000635988 CRYMQ14894 314 aa16.14■□□□□ 0.17
CACNA1A-220ENST00000635988 CLUL1Q15846 466 aa16.14■□□□□ 0.17
CACNA1A-220ENST00000635988 SPRED3Q2MJR0 410 aa16.14■□□□□ 0.17
CACNA1A-220ENST00000635988 C3orf67Q6ZVT6 689 aa16.14■□□□□ 0.17
CACNA1A-220ENST00000635988 FRMD5Q7Z6J6 570 aa16.14■□□□□ 0.17
CACNA1A-220ENST00000635988 EYA3Q99504 573 aa16.14■□□□□ 0.17
CACNA1A-220ENST00000635988 PCDHA2Q9Y5H9 948 aa16.14■□□□□ 0.17
CACNA1A-220ENST00000635988 TTI1O43156 1089 aa16.13■□□□□ 0.17
CACNA1A-220ENST00000635988 SSBP05455 408 aaKnown RBP eCLIP16.13■□□□□ 0.17
CACNA1A-220ENST00000635988 NELFCDQ8IXH7 590 aa16.13■□□□□ 0.17
CACNA1A-220ENST00000635988 WDR66Q8TBY9 1149 aa16.13■□□□□ 0.17
CACNA1A-220ENST00000635988 NAP1L3Q99457 506 aaPredicted RBP16.13■□□□□ 0.17
CACNA1A-220ENST00000635988 BTG4Q9NY30 223 aa16.13■□□□□ 0.17
CACNA1A-220ENST00000635988 CTNND1O60716 968 aaKnown RBP16.13■□□□□ 0.17
CACNA1A-220ENST00000635988 GFPT2O94808 682 aa16.13■□□□□ 0.17
CACNA1A-220ENST00000635988 AFPP02771 609 aaKnown RBP16.13■□□□□ 0.17
CACNA1A-220ENST00000635988 LDHCP07864 332 aa16.13■□□□□ 0.17
CACNA1A-220ENST00000635988 NUDT17P0C025 328 aa16.13■□□□□ 0.17
CACNA1A-220ENST00000635988 HERC4Q5GLZ8 1057 aaPredicted RBP16.13■□□□□ 0.17
CACNA1A-220ENST00000635988 SLC44A5Q8NCS7 719 aa16.13■□□□□ 0.17
CACNA1A-220ENST00000635988 SCFD1Q8WVM8 642 aa16.13■□□□□ 0.17
CACNA1A-220ENST00000635988 PGM2Q96G03 612 aa16.13■□□□□ 0.17
CACNA1A-220ENST00000635988 HES6Q96HZ4 224 aa16.13■□□□□ 0.17
CACNA1A-220ENST00000635988 TXLNGYQ9BZA5 131 aa16.13■□□□□ 0.17
CACNA1A-220ENST00000635988 ARMCX3Q9UH62 379 aaPredicted RBP16.13■□□□□ 0.17
CACNA1A-220ENST00000635988 HDAC9Q9UKV0 1011 aa16.13■□□□□ 0.17
CACNA1A-220ENST00000635988 NENFQ9UMX5 172 aa16.13■□□□□ 0.17
CACNA1A-220ENST00000635988 KAT6BQ8WYB5 2073 aa16.13■□□□□ 0.17
CACNA1A-220ENST00000635988 F8W031 263 aaPredicted RBP16.12■□□□□ 0.17
CACNA1A-220ENST00000635988 MARCH6O60337 910 aa16.12■□□□□ 0.17
CACNA1A-220ENST00000635988 EXOC3L4Q17RC7 722 aa16.12■□□□□ 0.17
CACNA1A-220ENST00000635988 SLC10A5Q5PT55 438 aa16.12■□□□□ 0.17
CACNA1A-220ENST00000635988 CRELD2Q6UXH1 353 aaPredicted RBP16.12■□□□□ 0.17
CACNA1A-220ENST00000635988 NT5DC3Q86UY8 548 aa16.12■□□□□ 0.17
CACNA1A-220ENST00000635988 NAP1L4Q99733 375 aaKnown RBP16.12■□□□□ 0.17
CACNA1A-220ENST00000635988 AMFRQ9UKV5 643 aa16.12■□□□□ 0.17
CACNA1A-220ENST00000635988 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.12■□□□□ 0.17
CACNA1A-220ENST00000635988 LOC102724428A0A0B4J2F2 783 aa16.12■□□□□ 0.17
CACNA1A-220ENST00000635988 CCDC169A6NNP5 214 aa16.12■□□□□ 0.17
CACNA1A-220ENST00000635988 ITGA4P13612 1032 aa16.12■□□□□ 0.17
CACNA1A-220ENST00000635988 SIK1P57059 783 aa16.12■□□□□ 0.17
CACNA1A-220ENST00000635988 PPP1R18Q6NYC8 613 aa16.12■□□□□ 0.17
CACNA1A-220ENST00000635988 DAAM2Q86T65 1068 aa16.12■□□□□ 0.17
CACNA1A-220ENST00000635988 GOLPH3Q9H4A6 298 aa16.12■□□□□ 0.17
CACNA1A-220ENST00000635988 DDX25Q9UHL0 483 aaKnown RBP16.12■□□□□ 0.17
CACNA1A-220ENST00000635988 PCDHA12Q9UN75 941 aa16.12■□□□□ 0.17
CACNA1A-220ENST00000635988 MYH4Q9Y623 1939 aa16.12■□□□□ 0.17
CACNA1A-220ENST00000635988 CFAP73A6NFT4 308 aa16.11■□□□□ 0.17
CACNA1A-220ENST00000635988 DCDC2CA8MYV0 355 aa16.11■□□□□ 0.17
CACNA1A-220ENST00000635988 NR2F2P24468 414 aa16.11■□□□□ 0.17
CACNA1A-220ENST00000635988 CDK8P49336 464 aa16.11■□□□□ 0.17
CACNA1A-220ENST00000635988 ELF3P78545 371 aaPredicted RBP16.11■□□□□ 0.17
CACNA1A-220ENST00000635988 POU5F1Q01860 360 aaKnown RBP16.11■□□□□ 0.17
CACNA1A-220ENST00000635988 RIPK1Q13546 671 aa16.11■□□□□ 0.17
CACNA1A-220ENST00000635988 ECM1Q16610 540 aa16.11■□□□□ 0.17
CACNA1A-220ENST00000635988 C16orf86Q6ZW13 317 aa16.11■□□□□ 0.17
CACNA1A-220ENST00000635988 TGFBRAP1Q8WUH2 860 aa16.11■□□□□ 0.17
CACNA1A-220ENST00000635988 ZNF622Q969S3 477 aaKnown RBP eCLIP16.11■□□□□ 0.17
CACNA1A-220ENST00000635988 ZNF317Q96PQ6 595 aaPredicted RBP16.11■□□□□ 0.17
CACNA1A-220ENST00000635988 TBC1D7Q9P0N9 293 aa16.11■□□□□ 0.17
CACNA1A-220ENST00000635988 ATP8A1Q9Y2Q0 1164 aa16.11■□□□□ 0.17
CACNA1A-220ENST00000635988 PITPNM2Q9BZ72 1349 aa16.11■□□□□ 0.17
CACNA1A-220ENST00000635988 GOLGA6L10A0A0M3HER8 536 aa16.11■□□□□ 0.17
CACNA1A-220ENST00000635988 FAM187AA6NFU0 413 aa16.11■□□□□ 0.17
CACNA1A-220ENST00000635988 EDIL3O43854 480 aa16.11■□□□□ 0.17
CACNA1A-220ENST00000635988 ATP6V1G2O95670 118 aa16.11■□□□□ 0.17
CACNA1A-220ENST00000635988 PLA2G4BP0C869 781 aa16.11■□□□□ 0.17
CACNA1A-220ENST00000635988 PON1P27169 355 aa16.11■□□□□ 0.17
CACNA1A-220ENST00000635988 PTENP60484 403 aa16.11■□□□□ 0.17
CACNA1A-220ENST00000635988 DPY19L2P1Q6NXN4 242 aa16.11■□□□□ 0.17
CACNA1A-220ENST00000635988 TEX11Q8IYF3 940 aa16.11■□□□□ 0.17
CACNA1A-220ENST00000635988 BANK1Q8NDB2 785 aa16.11■□□□□ 0.17
CACNA1A-220ENST00000635988 CCHCR1Q8TD31 782 aa16.11■□□□□ 0.17
CACNA1A-220ENST00000635988 MXD3Q9BW11 206 aa16.11■□□□□ 0.17
CACNA1A-220ENST00000635988 DPH5Q9H2P9 285 aa16.11■□□□□ 0.17
CACNA1A-220ENST00000635988 KANSL2Q9H9L4 492 aa16.11■□□□□ 0.17
CACNA1A-220ENST00000635988 TRAF3IP3Q9Y228 551 aa16.11■□□□□ 0.17
CACNA1A-220ENST00000635988 ATP2C2O75185 946 aa16.1■□□□□ 0.17
CACNA1A-220ENST00000635988 ACTN1P12814 892 aa16.1■□□□□ 0.17
CACNA1A-220ENST00000635988 SLC9A1P19634 815 aa16.1■□□□□ 0.17
CACNA1A-220ENST00000635988 PPP1R7Q15435 360 aa16.1■□□□□ 0.17
CACNA1A-220ENST00000635988 PIGWQ7Z7B1 504 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms