RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 C5orf67F2Z3F1 127 aa17.73■□□□□ 0.43
SNRNP48-203ENST00000634363 NCK2O43639 380 aa17.73■□□□□ 0.43
SNRNP48-203ENST00000634363 INSRRP14616 1297 aa17.73■□□□□ 0.43
SNRNP48-203ENST00000634363 IBSPP21815 317 aaPredicted RBP17.73■□□□□ 0.43
SNRNP48-203ENST00000634363 PDIA3P30101 505 aaKnown RBP17.73■□□□□ 0.43
SNRNP48-203ENST00000634363 CDC27P30260 824 aa17.73■□□□□ 0.43
SNRNP48-203ENST00000634363 CD52P31358 61 aa17.73■□□□□ 0.43
SNRNP48-203ENST00000634363 LTBRP36941 435 aa17.73■□□□□ 0.43
SNRNP48-203ENST00000634363 HYAL1Q12794 435 aa17.73■□□□□ 0.43
SNRNP48-203ENST00000634363 AGO3Q9H9G7 860 aaKnown RBP17.73■□□□□ 0.43
SNRNP48-203ENST00000634363 JADE2Q9NQC1 790 aa17.73■□□□□ 0.43
SNRNP48-203ENST00000634363 COL4A6Q14031 1691 aa17.72■□□□□ 0.43
SNRNP48-203ENST00000634363 MBLAC1A4D2B0 266 aaPredicted RBP17.72■□□□□ 0.43
SNRNP48-203ENST00000634363 RRN3P2A6NIE6 340 aa17.72■□□□□ 0.43
SNRNP48-203ENST00000634363 DCXO43602 365 aa17.72■□□□□ 0.43
SNRNP48-203ENST00000634363 DGKIO75912 1065 aa17.72■□□□□ 0.43
SNRNP48-203ENST00000634363 GTF2F1P35269 517 aaKnown RBP eCLIP17.72■□□□□ 0.43
SNRNP48-203ENST00000634363 ADD1P35611 737 aaKnown RBP17.72■□□□□ 0.43
SNRNP48-203ENST00000634363 NEK4P51957 841 aa17.72■□□□□ 0.43
SNRNP48-203ENST00000634363 CCT2P78371 535 aaKnown RBP17.72■□□□□ 0.43
SNRNP48-203ENST00000634363 MRPS6P82932 125 aaKnown RBP17.72■□□□□ 0.43
SNRNP48-203ENST00000634363 DLX2Q07687 328 aaPredicted RBP17.72■□□□□ 0.43
SNRNP48-203ENST00000634363 IER5Q5VY09 327 aa17.72■□□□□ 0.43
SNRNP48-203ENST00000634363 TSHZ1Q6ZSZ6 1077 aa17.72■□□□□ 0.43
SNRNP48-203ENST00000634363 HEATR3Q7Z4Q2 680 aa17.72■□□□□ 0.43
SNRNP48-203ENST00000634363 ZNF274Q96GC6 653 aaPredicted RBP17.72■□□□□ 0.43
SNRNP48-203ENST00000634363 LARP6Q9BRS8 491 aaKnown RBP17.72■□□□□ 0.43
SNRNP48-203ENST00000634363 LMAN2LQ9H0V9 348 aa17.72■□□□□ 0.43
SNRNP48-203ENST00000634363 AZI2Q9H6S1 392 aa17.72■□□□□ 0.43
SNRNP48-203ENST00000634363 FAM217BQ9NTX9 383 aaPredicted RBP17.72■□□□□ 0.43
SNRNP48-203ENST00000634363 PRKAG3Q9UGI9 489 aa17.72■□□□□ 0.43
SNRNP48-203ENST00000634363 TRPC6Q9Y210 931 aa17.72■□□□□ 0.43
SNRNP48-203ENST00000634363 TTC3P53804 2025 aa17.72■□□□□ 0.43
SNRNP48-203ENST00000634363 POTEB3A0JP26 581 aa17.71■□□□□ 0.43
SNRNP48-203ENST00000634363 M0QZ92 97 aa17.71■□□□□ 0.43
SNRNP48-203ENST00000634363 CPLX1O14810 134 aa17.71■□□□□ 0.43
SNRNP48-203ENST00000634363 MAFGO15525 162 aa17.71■□□□□ 0.43
SNRNP48-203ENST00000634363 LINC00271P0C7V0 271 aa17.71■□□□□ 0.43
SNRNP48-203ENST00000634363 AK2P54819 239 aa17.71■□□□□ 0.43
SNRNP48-203ENST00000634363 AKAP17AQ02040 695 aaKnown RBP17.71■□□□□ 0.43
SNRNP48-203ENST00000634363 ZP2Q05996 745 aa17.71■□□□□ 0.43
SNRNP48-203ENST00000634363 COL19A1Q14993 1142 aa17.71■□□□□ 0.43
SNRNP48-203ENST00000634363 PAN2Q504Q3 1202 aaKnown RBP17.71■□□□□ 0.43
SNRNP48-203ENST00000634363 POTEBQ6S5H4 581 aa17.71■□□□□ 0.43
SNRNP48-203ENST00000634363 RTN4RL1Q86UN2 441 aaPredicted RBP17.71■□□□□ 0.43
SNRNP48-203ENST00000634363 ADHFE1Q8IWW8 467 aa17.71■□□□□ 0.43
SNRNP48-203ENST00000634363 TRAPPC12Q8WVT3 735 aa17.71■□□□□ 0.43
SNRNP48-203ENST00000634363 CLP1Q92989 425 aaKnown RBP17.71■□□□□ 0.43
SNRNP48-203ENST00000634363 ZNF689Q96CS4 500 aaPredicted RBP17.71■□□□□ 0.43
SNRNP48-203ENST00000634363 JPH1Q9HDC5 661 aaPredicted RBP17.71■□□□□ 0.43
SNRNP48-203ENST00000634363 SLC9A2Q9UBY0 812 aa17.71■□□□□ 0.43
SNRNP48-203ENST00000634363 LINC01565O15544 149 aa17.7■□□□□ 0.42
SNRNP48-203ENST00000634363 RBM25P49756 843 aaKnown RBP17.7■□□□□ 0.42
SNRNP48-203ENST00000634363 FUT2Q10981 343 aa17.7■□□□□ 0.42
SNRNP48-203ENST00000634363 STK3Q13188 491 aa17.7■□□□□ 0.42
SNRNP48-203ENST00000634363 CTC1Q2NKJ3 1217 aa17.7■□□□□ 0.42
SNRNP48-203ENST00000634363 CPLX2Q6PUV4 134 aaKnown RBP17.7■□□□□ 0.42
SNRNP48-203ENST00000634363 ALYREFQ86V81 257 aaKnown RBP17.7■□□□□ 0.42
SNRNP48-203ENST00000634363 TNPO1Q92973 898 aaKnown RBP17.7■□□□□ 0.42
SNRNP48-203ENST00000634363 PCYT2Q99447 389 aa17.7■□□□□ 0.42
SNRNP48-203ENST00000634363 NCOA5Q9HCD5 579 aaKnown RBP17.7■□□□□ 0.42
SNRNP48-203ENST00000634363 KCNH7Q9NS40 1196 aa17.7■□□□□ 0.42
SNRNP48-203ENST00000634363 PLAGL2Q9UPG8 496 aa17.7■□□□□ 0.42
SNRNP48-203ENST00000634363 MRPL42Q9Y6G3 142 aaKnown RBP17.7■□□□□ 0.42
SNRNP48-203ENST00000634363 V9GY48 417 aaPredicted RBP17.7■□□□□ 0.42
SNRNP48-203ENST00000634363 hCG_1984214I3L0E3 225 aa17.69■□□□□ 0.42
SNRNP48-203ENST00000634363 MBTPS2O43462 519 aa17.69■□□□□ 0.42
SNRNP48-203ENST00000634363 IRS1P35568 1242 aa17.69■□□□□ 0.42
SNRNP48-203ENST00000634363 ZNF713Q8N859 430 aaPredicted RBP17.69■□□□□ 0.42
SNRNP48-203ENST00000634363 CYP2W1Q8TAV3 490 aa17.69■□□□□ 0.42
SNRNP48-203ENST00000634363 LINC01599Q8WXQ3 324 aa17.69■□□□□ 0.42
SNRNP48-203ENST00000634363 PGBD1Q96JS3 809 aa17.69■□□□□ 0.42
SNRNP48-203ENST00000634363 MXRA8Q9BRK3 442 aa17.69■□□□□ 0.42
SNRNP48-203ENST00000634363 SDF4Q9BRK5 362 aa17.69■□□□□ 0.42
SNRNP48-203ENST00000634363 PLVAPQ9BX97 442 aa17.69■□□□□ 0.42
SNRNP48-203ENST00000634363 SLKQ9H2G2 1235 aaPredicted RBP17.69■□□□□ 0.42
SNRNP48-203ENST00000634363 RC3H2Q9HBD1 1191 aaKnown RBP17.69■□□□□ 0.42
SNRNP48-203ENST00000634363 PADI3Q9ULW8 664 aa17.69■□□□□ 0.42
SNRNP48-203ENST00000634363 TRPV2Q9Y5S1 764 aa17.69■□□□□ 0.42
SNRNP48-203ENST00000634363 C19orf67A6NJJ6 358 aa17.68■□□□□ 0.42
SNRNP48-203ENST00000634363 PPFIA3O75145 1194 aa17.68■□□□□ 0.42
SNRNP48-203ENST00000634363 MMP1P03956 469 aa17.68■□□□□ 0.42
SNRNP48-203ENST00000634363 STAG3L1P0CL83 205 aa17.68■□□□□ 0.42
SNRNP48-203ENST00000634363 ARP10275 920 aa17.68■□□□□ 0.42
SNRNP48-203ENST00000634363 NDUFV1P49821 464 aa17.68■□□□□ 0.42
SNRNP48-203ENST00000634363 STAT5BP51692 787 aa17.68■□□□□ 0.42
SNRNP48-203ENST00000634363 NAPAP54920 295 aa17.68■□□□□ 0.42
SNRNP48-203ENST00000634363 ACTR2P61160 394 aa17.68■□□□□ 0.42
SNRNP48-203ENST00000634363 NFX1Q12986 1120 aaKnown RBP17.68■□□□□ 0.42
SNRNP48-203ENST00000634363 PAK2Q13177 524 aa17.68■□□□□ 0.42
SNRNP48-203ENST00000634363 PLCB4Q15147 1175 aa17.68■□□□□ 0.42
SNRNP48-203ENST00000634363 SMAD2Q15796 467 aaKnown RBP17.68■□□□□ 0.42
SNRNP48-203ENST00000634363 TRIM22Q8IYM9 498 aa17.68■□□□□ 0.42
SNRNP48-203ENST00000634363 FTHL17Q9BXU8 183 aa17.68■□□□□ 0.42
SNRNP48-203ENST00000634363 CELF4Q9BZC1 486 aaKnown RBP17.68■□□□□ 0.42
SNRNP48-203ENST00000634363 LRFN2Q9ULH4 789 aa17.68■□□□□ 0.42
SNRNP48-203ENST00000634363 TPCN1Q9ULQ1 816 aa17.68■□□□□ 0.42
SNRNP48-203ENST00000634363 GINS2Q9Y248 185 aa17.68■□□□□ 0.42
SNRNP48-203ENST00000634363 PCDHA2Q9Y5H9 948 aa17.68■□□□□ 0.42
SNRNP48-203ENST00000634363 KIAA1671Q9BY89 1806 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms