RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 KIAA1217Q5T5P2 1943 aa6.13□□□□□ -1.43
NEK3-211ENST00000629912 RSPH10B2B2RC85 870 aa6.13□□□□□ -1.43
NEK3-211ENST00000629912 ZBTB39O15060 712 aa6.13□□□□□ -1.43
NEK3-211ENST00000629912 NKRFO15226 690 aaKnown RBP eCLIP6.13□□□□□ -1.43
NEK3-211ENST00000629912 SLC16A3O15427 465 aaKnown RBP6.13□□□□□ -1.43
NEK3-211ENST00000629912 TGFB1I1O43294 461 aa6.13□□□□□ -1.43
NEK3-211ENST00000629912 KIF5CO60282 957 aa6.13□□□□□ -1.43
NEK3-211ENST00000629912 DKC1O60832 514 aaKnown RBP eCLIP6.13□□□□□ -1.43
NEK3-211ENST00000629912 PRPF6O94906 941 aaKnown RBP6.13□□□□□ -1.43
NEK3-211ENST00000629912 FAM13AO94988 1023 aa6.13□□□□□ -1.43
NEK3-211ENST00000629912 NR3C2P08235 984 aa6.13□□□□□ -1.43
NEK3-211ENST00000629912 RSPH10BP0C881 870 aa6.13□□□□□ -1.43
NEK3-211ENST00000629912 MYBP10242 640 aa6.13□□□□□ -1.43
NEK3-211ENST00000629912 CCND2P30279 289 aa6.13□□□□□ -1.43
NEK3-211ENST00000629912 SFNP31947 248 aa6.13□□□□□ -1.43
NEK3-211ENST00000629912 ARHGAP25P42331 645 aa6.13□□□□□ -1.43
NEK3-211ENST00000629912 KLK7P49862 253 aa6.13□□□□□ -1.43
NEK3-211ENST00000629912 CASP5P51878 434 aa6.13□□□□□ -1.43
NEK3-211ENST00000629912 JAK3P52333 1124 aa6.13□□□□□ -1.43
NEK3-211ENST00000629912 HMGCS2P54868 508 aa6.13□□□□□ -1.43
NEK3-211ENST00000629912 SNRPFP62306 86 aaKnown RBP6.13□□□□□ -1.43
NEK3-211ENST00000629912 TUBB4BP68371 445 aa6.13□□□□□ -1.43
NEK3-211ENST00000629912 KRT76Q01546 638 aa6.13□□□□□ -1.43
NEK3-211ENST00000629912 RAD51AP2Q09MP3 1159 aa6.13□□□□□ -1.43
NEK3-211ENST00000629912 ITGB3BPQ13352 177 aaPredicted RBP6.13□□□□□ -1.43
NEK3-211ENST00000629912 DGKZQ13574 1117 aa6.13□□□□□ -1.43
NEK3-211ENST00000629912 MTMR1Q13613 665 aa6.13□□□□□ -1.43
NEK3-211ENST00000629912 ALCAMQ13740 583 aa6.13□□□□□ -1.43
NEK3-211ENST00000629912 TMEM132BQ14DG7 1078 aa6.13□□□□□ -1.43
NEK3-211ENST00000629912 CCDC40Q4G0X9 1142 aa6.13□□□□□ -1.43
NEK3-211ENST00000629912 ARHGEF16Q5VV41 709 aa6.13□□□□□ -1.43
NEK3-211ENST00000629912 PRAMEF18Q5VWM3 479 aa6.13□□□□□ -1.43
NEK3-211ENST00000629912 ZNF746Q6NUN9 644 aaPredicted RBP6.13□□□□□ -1.43
NEK3-211ENST00000629912 SAMD1Q6SPF0 538 aaPredicted RBP6.13□□□□□ -1.43
NEK3-211ENST00000629912 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.13□□□□□ -1.43
NEK3-211ENST00000629912 NLRX1Q86UT6 975 aa6.13□□□□□ -1.43
NEK3-211ENST00000629912 SLC9A9Q8IVB4 645 aa6.13□□□□□ -1.43
NEK3-211ENST00000629912 NELFCDQ8IXH7 590 aa6.13□□□□□ -1.43
NEK3-211ENST00000629912 ZNF710Q8N1W2 664 aa6.13□□□□□ -1.43
NEK3-211ENST00000629912 MYCT1Q8N699 235 aa6.13□□□□□ -1.43
NEK3-211ENST00000629912 CHST13Q8NET6 341 aa6.13□□□□□ -1.43
NEK3-211ENST00000629912 NEK11Q8NG66 645 aa6.13□□□□□ -1.43
NEK3-211ENST00000629912 GOLGA5Q8TBA6 731 aa6.13□□□□□ -1.43
NEK3-211ENST00000629912 NSUN6Q8TEA1 469 aaKnown RBP6.13□□□□□ -1.43
NEK3-211ENST00000629912 BAP1Q92560 729 aa6.13□□□□□ -1.43
NEK3-211ENST00000629912 DCPSQ96C86 337 aaKnown RBP6.13□□□□□ -1.43
NEK3-211ENST00000629912 EEF2KMTQ96G04 330 aa6.13□□□□□ -1.43
NEK3-211ENST00000629912 BORCS6Q96GS4 357 aa6.13□□□□□ -1.43
NEK3-211ENST00000629912 CDHR1Q96JP9 859 aa6.13□□□□□ -1.43
NEK3-211ENST00000629912 PCMTD1Q96MG8 357 aaPredicted RBP6.13□□□□□ -1.43
NEK3-211ENST00000629912 WDR24Q96S15 920 aa6.13□□□□□ -1.43
NEK3-211ENST00000629912 FIZ1Q96SL8 496 aa6.13□□□□□ -1.43
NEK3-211ENST00000629912 IWS1Q96ST2 819 aa6.13□□□□□ -1.43
NEK3-211ENST00000629912 LXNQ9BS40 222 aa6.13□□□□□ -1.43
NEK3-211ENST00000629912 DESI2Q9BSY9 194 aa6.13□□□□□ -1.43
NEK3-211ENST00000629912 MKNK1Q9BUB5 465 aa6.13□□□□□ -1.43
NEK3-211ENST00000629912 TEX13BQ9BXU2 312 aa6.13□□□□□ -1.43
NEK3-211ENST00000629912 ST6GALNAC4Q9H4F1 302 aa6.13□□□□□ -1.43
NEK3-211ENST00000629912 ZHX3Q9H4I2 956 aa6.13□□□□□ -1.43
NEK3-211ENST00000629912 HAUS4Q9H6D7 363 aa6.13□□□□□ -1.43
NEK3-211ENST00000629912 MMRN2Q9H8L6 949 aa6.13□□□□□ -1.43
NEK3-211ENST00000629912 PLCB1Q9NQ66 1216 aa6.13□□□□□ -1.43
NEK3-211ENST00000629912 GGA3Q9NZ52 723 aa6.13□□□□□ -1.43
NEK3-211ENST00000629912 CGNQ9P2M7 1197 aaKnown RBP6.13□□□□□ -1.43
NEK3-211ENST00000629912 WRAP73Q9P2S5 460 aaPredicted RBP6.13□□□□□ -1.43
NEK3-211ENST00000629912 ZNF214Q9UL59 606 aaPredicted RBP6.13□□□□□ -1.43
NEK3-211ENST00000629912 REXO2Q9Y3B8 237 aaKnown RBP6.13□□□□□ -1.43
NEK3-211ENST00000629912 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.13□□□□□ -1.43
NEK3-211ENST00000629912 NFASCO94856 1347 aa6.13□□□□□ -1.43
NEK3-211ENST00000629912 SSU72P8A0A1W2PR75 194 aa6.12□□□□□ -1.43
NEK3-211ENST00000629912 SSC5DA1L4H1 1573 aa6.12□□□□□ -1.43
NEK3-211ENST00000629912 GTPBP10A4D1E9 387 aaKnown RBP6.12□□□□□ -1.43
NEK3-211ENST00000629912 ARHGEF35A5YM69 484 aa6.12□□□□□ -1.43
NEK3-211ENST00000629912 SFI1A8K8P3 1242 aa6.12□□□□□ -1.43
NEK3-211ENST00000629912 WDR64B1ANS9 1081 aa6.12□□□□□ -1.43
NEK3-211ENST00000629912 SPATA31C2B4DYI2 1134 aa6.12□□□□□ -1.43
NEK3-211ENST00000629912 CXCL11O14625 94 aa6.12□□□□□ -1.43
NEK3-211ENST00000629912 FANCGO15287 622 aa6.12□□□□□ -1.43
NEK3-211ENST00000629912 CHMP2AO43633 222 aa6.12□□□□□ -1.43
NEK3-211ENST00000629912 RRP9O43818 475 aaKnown RBP6.12□□□□□ -1.43
NEK3-211ENST00000629912 PPP1R12BO60237 982 aaPredicted RBP6.12□□□□□ -1.43
NEK3-211ENST00000629912 ATP9AO75110 1047 aa6.12□□□□□ -1.43
NEK3-211ENST00000629912 PPP1R37O75864 691 aa6.12□□□□□ -1.43
NEK3-211ENST00000629912 URI1O94763 535 aaPredicted RBP6.12□□□□□ -1.43
NEK3-211ENST00000629912 NOL4O94818 638 aa6.12□□□□□ -1.43
NEK3-211ENST00000629912 DDNO94850 711 aaPredicted RBP6.12□□□□□ -1.43
NEK3-211ENST00000629912 GCNT3O95395 438 aa6.12□□□□□ -1.43
NEK3-211ENST00000629912 NR3C1P04150 777 aa6.12□□□□□ -1.43
NEK3-211ENST00000629912 PTPRFP10586 1907 aa6.12□□□□□ -1.43
NEK3-211ENST00000629912 MYCLP12524 364 aaPredicted RBP6.12□□□□□ -1.43
NEK3-211ENST00000629912 EIF2AK2P19525 551 aaKnown RBP6.12□□□□□ -1.43
NEK3-211ENST00000629912 NR2F2P24468 414 aa6.12□□□□□ -1.43
NEK3-211ENST00000629912 NMT1P30419 496 aaKnown RBP6.12□□□□□ -1.43
NEK3-211ENST00000629912 ICAM3P32942 547 aa6.12□□□□□ -1.43
NEK3-211ENST00000629912 PSMC2P35998 433 aaKnown RBP6.12□□□□□ -1.43
NEK3-211ENST00000629912 RARRES1P49788 294 aa6.12□□□□□ -1.43
NEK3-211ENST00000629912 PSMC5P62195 406 aa6.12□□□□□ -1.43
NEK3-211ENST00000629912 PPATQ06203 517 aa6.12□□□□□ -1.43
NEK3-211ENST00000629912 NCBP1Q09161 790 aaKnown RBP6.12□□□□□ -1.43
NEK3-211ENST00000629912 KCNH2Q12809 1159 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms