RNA–Protein interactions for RNA: ENST00000629047.1

SPTAN1-216, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-216ENST00000629047 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.33□□□□□ -2.04
SPTAN1-216ENST00000629047 FHOD1Q9Y613 1164 aa2.33□□□□□ -2.04
SPTAN1-216ENST00000629047 TTC41PQ6P2S7 1318 aa2.33□□□□□ -2.04
SPTAN1-216ENST00000629047 PHLPP2Q6ZVD8 1323 aa2.33□□□□□ -2.04
SPTAN1-216ENST00000629047 ATXN2Q99700 1313 aaKnown RBP2.33□□□□□ -2.04
SPTAN1-216ENST00000629047 UNC13AQ9UPW8 1703 aa2.33□□□□□ -2.04
SPTAN1-216ENST00000629047 GPRASP1Q5JY77 1395 aa2.33□□□□□ -2.04
SPTAN1-216ENST00000629047 MAP3K5Q99683 1374 aa2.33□□□□□ -2.04
SPTAN1-216ENST00000629047 RPRD2Q5VT52 1461 aaKnown RBP2.33□□□□□ -2.04
SPTAN1-216ENST00000629047 CCDC141Q6ZP82 1450 aa2.33□□□□□ -2.04
SPTAN1-216ENST00000629047 EPRSP07814 1512 aaKnown RBP2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 WIZO95785 1651 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 CCDC189A1A4V9 331 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 ANKRD33BA6NCL7 494 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 MEIS1O00470 390 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 BCAR3O75815 825 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 PRAMEF1O95521 474 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 DESP17661 470 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 TACR1P25103 407 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 PMLP29590 882 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 GSTT1P30711 240 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 RANBP1P43487 201 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 KCNJ6P48051 423 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 LIG3P49916 1009 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 RPS6KA3P51812 740 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 ZNF75DP51815 510 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 MRPL12P52815 198 aaKnown RBP2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 KRTAP10-7P60409 375 aaPredicted RBP2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 TGFB2P61812 414 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 RBM6P78332 1123 aaKnown RBP2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 KRT85P78386 507 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 NUCB1Q02818 461 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 TMEM62Q0P6H9 643 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 SCRN1Q12765 414 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 LAMB3Q13751 1172 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 MLECQ14165 292 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 SF3A1Q15459 793 aaKnown RBP2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 WHAMMP3Q1A5X7 153 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 ERCC6LQ2NKX8 1250 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 RGL3Q3MIN7 710 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 CCDC40Q4G0X9 1142 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 PREPLQ4J6C6 727 aaPredicted RBP2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 RRP12Q5JTH9 1297 aaKnown RBP2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 RNF187Q5TA31 235 aaPredicted RBP2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 CCDC181Q5TID7 509 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 ANKRD45Q5TZF3 282 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 HHATQ5VTY9 493 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 SCARA3Q6AZY7 606 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 TTC19Q6DKK2 380 aaPredicted RBP2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 CAPRIN2Q6IMN6 1127 aaKnown RBP2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 GLB1LQ6UWU2 654 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 CCDC121Q6ZUS5 278 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 CCDC80Q76M96 950 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 USP48Q86UV5 1035 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 MORC1Q86VD1 984 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 CHD1LQ86WJ1 897 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 RBM12BQ8IXT5 1001 aaKnown RBP2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 LMNTD2Q8IXW0 634 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 AMOTL1Q8IY63 956 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 CEP57L1Q8IYX8 460 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 C17orf53Q8N3J3 647 aaPredicted RBP2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 DRAXINQ8NBI3 349 aaPredicted RBP2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 TMEM87AQ8NBN3 555 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 TRIM58Q8NG06 486 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 SMARCC2Q8TAQ2 1214 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 FAM81AQ8TBF8 368 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 P3H4Q92791 437 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 JAKMIP2Q96AA8 810 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 TBC1D31Q96DN5 1066 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 SPDL1Q96EA4 605 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 HOOK2Q96ED9 719 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 JAKMIP1Q96N16 626 aaKnown RBP2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 ANKRD27Q96NW4 1050 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 NAP1L3Q99457 506 aaPredicted RBP2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 MPHOSPH8Q99549 860 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 TSC22D3Q99576 134 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 PTPN18Q99952 460 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 TRIM7Q9C029 511 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 TRIM4Q9C037 500 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 VCXQ9H320 206 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 RMI1Q9H9A7 625 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 ATP6V0A4Q9HBG4 840 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 ZNF446Q9NWS9 450 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 UTP6Q9NYH9 597 aaKnown RBP2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 RGL1Q9NZL6 768 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 ORC3Q9UBD5 711 aaPredicted RBP2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 ABCF2Q9UG63 623 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 NOL12Q9UGY1 213 aaKnown RBP eCLIP2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 MCM8Q9UJA3 840 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 FAN1Q9Y2M0 1017 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 DAAM1Q9Y4D1 1078 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 IL16Q14005 1332 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 NAIPQ13075 1403 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 FHOD3Q2V2M9 1422 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 SPATA31E1Q6ZUB1 1445 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 PRXQ9BXM0 1461 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 CLASP1Q7Z460 1538 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 PLXNC1O60486 1568 aa2.32□□□□□ -2.04
SPTAN1-216ENST00000629047 KIF21AQ7Z4S6 1674 aa2.31□□□□□ -2.04
SPTAN1-216ENST00000629047 CFAP43Q8NDM7 1665 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms