RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 LRCH2Q5VUJ6 765 aa25.27■■□□□ 1.64
SF1-220ENST00000626028 SWSAP1Q6NVH7 229 aa25.27■■□□□ 1.64
SF1-220ENST00000626028 NEK8Q86SG6 692 aa25.27■■□□□ 1.64
SF1-220ENST00000626028 HERC6Q8IVU3 1022 aa25.27■■□□□ 1.64
SF1-220ENST00000626028 NME8Q8N427 588 aa25.27■■□□□ 1.64
SF1-220ENST00000626028 BBXQ8WY36 941 aaPredicted RBP25.27■■□□□ 1.64
SF1-220ENST00000626028 SEPT8Q92599 483 aa25.27■■□□□ 1.64
SF1-220ENST00000626028 FAM161BQ96MY7 647 aa25.27■■□□□ 1.64
SF1-220ENST00000626028 TEKT3Q9BXF9 490 aa25.27■■□□□ 1.64
SF1-220ENST00000626028 SQORQ9Y6N5 450 aa25.27■■□□□ 1.64
SF1-220ENST00000626028 ZNF484Q5JVG2 852 aa25.26■■□□□ 1.63
SF1-220ENST00000626028 IER5Q5VY09 327 aa25.26■■□□□ 1.63
SF1-220ENST00000626028 FAM167AQ96KS9 214 aa25.26■■□□□ 1.63
SF1-220ENST00000626028 DDX25Q9UHL0 483 aaKnown RBP25.26■■□□□ 1.63
SF1-220ENST00000626028 SAMM50Q9Y512 469 aa25.26■■□□□ 1.63
SF1-220ENST00000626028 CHD7Q9P2D1 2997 aa25.26■■□□□ 1.63
SF1-220ENST00000626028 SMIM35A0A1B0GVV1 85 aa25.25■■□□□ 1.63
SF1-220ENST00000626028 PSMD10O75832 226 aa25.25■■□□□ 1.63
SF1-220ENST00000626028 KRT2P35908 639 aa25.25■■□□□ 1.63
SF1-220ENST00000626028 MKRN4PQ13434 485 aaPredicted RBP25.25■■□□□ 1.63
SF1-220ENST00000626028 TRIM29Q14134 588 aa25.25■■□□□ 1.63
SF1-220ENST00000626028 RABEP1Q15276 862 aa25.25■■□□□ 1.63
SF1-220ENST00000626028 INF2Q27J81 1249 aa25.25■■□□□ 1.63
SF1-220ENST00000626028 RUFY4Q6ZNE9 571 aa25.25■■□□□ 1.63
SF1-220ENST00000626028 USP38Q8NB14 1042 aa25.25■■□□□ 1.63
SF1-220ENST00000626028 FAM20AQ96MK3 541 aa25.25■■□□□ 1.63
SF1-220ENST00000626028 DISC1Q9NRI5 854 aa25.25■■□□□ 1.63
SF1-220ENST00000626028 CEP131Q9UPN4 1083 aa25.25■■□□□ 1.63
SF1-220ENST00000626028 IGSF9BQ9UPX0 1349 aa25.25■■□□□ 1.63
SF1-220ENST00000626028 TRANK1O15050 2925 aa25.24■■□□□ 1.63
SF1-220ENST00000626028 TBX3O15119 743 aa25.24■■□□□ 1.63
SF1-220ENST00000626028 TDP2O95551 362 aa25.24■■□□□ 1.63
SF1-220ENST00000626028 CHRNA1P02708 482 aa25.24■■□□□ 1.63
SF1-220ENST00000626028 IGBP1P78318 339 aa25.24■■□□□ 1.63
SF1-220ENST00000626028 MGAT3Q09327 533 aa25.24■■□□□ 1.63
SF1-220ENST00000626028 CKAP2LQ8IYA6 745 aa25.24■■□□□ 1.63
SF1-220ENST00000626028 DBF4BQ8NFT6 615 aa25.24■■□□□ 1.63
SF1-220ENST00000626028 ETNPPLQ8TBG4 499 aa25.24■■□□□ 1.63
SF1-220ENST00000626028 M0QZ92 97 aa25.23■■□□□ 1.63
SF1-220ENST00000626028 MMP1P03956 469 aa25.23■■□□□ 1.63
SF1-220ENST00000626028 CTSHP09668 335 aa25.23■■□□□ 1.63
SF1-220ENST00000626028 MTHFD1LQ6UB35 978 aa25.23■■□□□ 1.63
SF1-220ENST00000626028 B3GNT9Q6UX72 402 aa25.23■■□□□ 1.63
SF1-220ENST00000626028 DNAJB3Q8WWF6 145 aa25.23■■□□□ 1.63
SF1-220ENST00000626028 YBX2Q9Y2T7 364 aaKnown RBP25.23■■□□□ 1.63
SF1-220ENST00000626028 KDM3AQ9Y4C1 1321 aa25.22■■□□□ 1.63
SF1-220ENST00000626028 ATP4AP20648 1035 aa25.22■■□□□ 1.63
SF1-220ENST00000626028 RABGGTBP53611 331 aa25.22■■□□□ 1.63
SF1-220ENST00000626028 MRPS6P82932 125 aaKnown RBP25.22■■□□□ 1.63
SF1-220ENST00000626028 HMGN5P82970 282 aaKnown RBP25.22■■□□□ 1.63
SF1-220ENST00000626028 GRIN2CQ14957 1233 aa25.22■■□□□ 1.63
SF1-220ENST00000626028 LETM2Q2VYF4 491 aa25.22■■□□□ 1.63
SF1-220ENST00000626028 PPP2R2DQ66LE6 453 aa25.22■■□□□ 1.63
SF1-220ENST00000626028 PIK3AP1Q6ZUJ8 805 aa25.22■■□□□ 1.63
SF1-220ENST00000626028 ZNF710Q8N1W2 664 aa25.22■■□□□ 1.63
SF1-220ENST00000626028 OXER1Q8TDS5 423 aa25.22■■□□□ 1.63
SF1-220ENST00000626028 TNFRSF25Q93038 417 aa25.22■■□□□ 1.63
SF1-220ENST00000626028 IFIH1Q9BYX4 1025 aaKnown RBP25.22■■□□□ 1.63
SF1-220ENST00000626028 NKX2-4Q9H2Z4 354 aa25.22■■□□□ 1.63
SF1-220ENST00000626028 GJB4Q9NTQ9 266 aa25.22■■□□□ 1.63
SF1-220ENST00000626028 GABBR1Q9UBS5 961 aa25.22■■□□□ 1.63
SF1-220ENST00000626028 TTC3P53804 2025 aa25.21■■□□□ 1.63
SF1-220ENST00000626028 MAGEB2O15479 319 aa25.21■■□□□ 1.63
SF1-220ENST00000626028 JAK2O60674 1132 aa25.21■■□□□ 1.63
SF1-220ENST00000626028 GJB5O95377 273 aa25.21■■□□□ 1.63
SF1-220ENST00000626028 AMHP03971 560 aa25.21■■□□□ 1.63
SF1-220ENST00000626028 KLRC1P26715 233 aa25.21■■□□□ 1.63
SF1-220ENST00000626028 ST3GAL1Q11201 340 aa25.21■■□□□ 1.63
SF1-220ENST00000626028 KCNMB3Q9NPA1 279 aa25.21■■□□□ 1.63
SF1-220ENST00000626028 ZBTB42B2RXF5 422 aa25.2■■□□□ 1.62
SF1-220ENST00000626028 TLL1O43897 1013 aa25.2■■□□□ 1.62
SF1-220ENST00000626028 ST18O60284 1047 aa25.2■■□□□ 1.62
SF1-220ENST00000626028 TCTN1Q2MV58 587 aa25.2■■□□□ 1.62
SF1-220ENST00000626028 TSHZ1Q6ZSZ6 1077 aa25.2■■□□□ 1.62
SF1-220ENST00000626028 UIMC1Q96RL1 719 aa25.2■■□□□ 1.62
SF1-220ENST00000626028 RAD9AQ99638 391 aa25.2■■□□□ 1.62
SF1-220ENST00000626028 UNC45AQ9H3U1 944 aa25.2■■□□□ 1.62
SF1-220ENST00000626028 NRBP2Q9NSY0 501 aa25.2■■□□□ 1.62
SF1-220ENST00000626028 CDY2AQ9Y6F7 541 aa25.2■■□□□ 1.62
SF1-220ENST00000626028 CCNT1O60563 726 aaKnown RBP25.19■■□□□ 1.62
SF1-220ENST00000626028 DEFB103AP81534 67 aa25.19■■□□□ 1.62
SF1-220ENST00000626028 PPP2R5CQ13362 524 aa25.19■■□□□ 1.62
SF1-220ENST00000626028 FBXO47Q5MNV8 452 aa25.19■■□□□ 1.62
SF1-220ENST00000626028 KRT40Q6A162 431 aa25.19■■□□□ 1.62
SF1-220ENST00000626028 MIER3Q7Z3K6 550 aa25.19■■□□□ 1.62
SF1-220ENST00000626028 SLFN12Q8IYM2 578 aa25.19■■□□□ 1.62
SF1-220ENST00000626028 TRAPPC12Q8WVT3 735 aa25.19■■□□□ 1.62
SF1-220ENST00000626028 GAS2L1Q99501 681 aaPredicted RBP25.19■■□□□ 1.62
SF1-220ENST00000626028 ZBED2Q9BTP6 218 aa25.19■■□□□ 1.62
SF1-220ENST00000626028 FAM49AQ9H0Q0 323 aaPredicted RBP25.19■■□□□ 1.62
SF1-220ENST00000626028 TRPV2Q9Y5S1 764 aa25.19■■□□□ 1.62
SF1-220ENST00000626028 COL4A6Q14031 1691 aa25.19■■□□□ 1.62
SF1-220ENST00000626028 SLC37A4O43826 429 aa25.18■■□□□ 1.62
SF1-220ENST00000626028 CA3P07451 260 aa25.18■■□□□ 1.62
SF1-220ENST00000626028 FOSL2P15408 326 aa25.18■■□□□ 1.62
SF1-220ENST00000626028 NR5A1Q13285 461 aa25.18■■□□□ 1.62
SF1-220ENST00000626028 SAFBQ15424 915 aaKnown RBP eCLIP25.18■■□□□ 1.62
SF1-220ENST00000626028 CCDC83Q8IWF9 413 aa25.18■■□□□ 1.62
SF1-220ENST00000626028 DIS3L2Q8IYB7 885 aaKnown RBP25.18■■□□□ 1.62
SF1-220ENST00000626028 MYLIPQ8WY64 445 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms