RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 FOXP1Q9H334 677 aaPredicted RBP11.97□□□□□ -0.49
VPS8-227ENST00000625842 SLC9A2Q9UBY0 812 aa11.97□□□□□ -0.49
VPS8-227ENST00000625842 PCDHA10Q9Y5I2 948 aa11.97□□□□□ -0.49
VPS8-227ENST00000625842 CXCL11O14625 94 aa11.97□□□□□ -0.49
VPS8-227ENST00000625842 MCF2LO15068 1137 aa11.97□□□□□ -0.49
VPS8-227ENST00000625842 GPC3P51654 580 aa11.97□□□□□ -0.49
VPS8-227ENST00000625842 PLD1Q13393 1074 aa11.97□□□□□ -0.49
VPS8-227ENST00000625842 MTMR3Q13615 1198 aa11.97□□□□□ -0.49
VPS8-227ENST00000625842 STARD3Q14849 445 aa11.97□□□□□ -0.49
VPS8-227ENST00000625842 STILQ15468 1287 aa11.97□□□□□ -0.49
VPS8-227ENST00000625842 TBCKQ8TEA7 893 aa11.97□□□□□ -0.49
VPS8-227ENST00000625842 RPGRIP1Q96KN7 1286 aa11.97□□□□□ -0.49
VPS8-227ENST00000625842 EMILIN2Q9BXX0 1053 aa11.97□□□□□ -0.49
VPS8-227ENST00000625842 H7C1W4 665 aa11.96□□□□□ -0.49
VPS8-227ENST00000625842 CAND2O75155 1236 aa11.96□□□□□ -0.49
VPS8-227ENST00000625842 ADCY5O95622 1261 aa11.96□□□□□ -0.49
VPS8-227ENST00000625842 CHEK2O96017 543 aa11.96□□□□□ -0.49
VPS8-227ENST00000625842 ABCB4P21439 1286 aa11.96□□□□□ -0.49
VPS8-227ENST00000625842 QARSP47897 775 aaKnown RBP11.96□□□□□ -0.49
VPS8-227ENST00000625842 TRIM28Q13263 835 aaKnown RBP11.96□□□□□ -0.49
VPS8-227ENST00000625842 ACBD5Q5T8D3 534 aaPredicted RBP11.96□□□□□ -0.49
VPS8-227ENST00000625842 RFX6Q8HWS3 928 aa11.96□□□□□ -0.49
VPS8-227ENST00000625842 RHPN2Q8IUC4 686 aa11.96□□□□□ -0.49
VPS8-227ENST00000625842 ARHGAP18Q8N392 663 aa11.96□□□□□ -0.49
VPS8-227ENST00000625842 STAMQ92783 540 aa11.96□□□□□ -0.49
VPS8-227ENST00000625842 IFT43Q96FT9 208 aa11.96□□□□□ -0.49
VPS8-227ENST00000625842 USP26Q9BXU7 913 aa11.96□□□□□ -0.49
VPS8-227ENST00000625842 C17orf102A2RUQ5 167 aa11.96□□□□□ -0.49
VPS8-227ENST00000625842 UBE2Q2LH0YL09 131 aa11.96□□□□□ -0.49
VPS8-227ENST00000625842 EVI5O60447 810 aa11.96□□□□□ -0.49
VPS8-227ENST00000625842 ARHGEF18Q6ZSZ5 1173 aa11.96□□□□□ -0.49
VPS8-227ENST00000625842 GPC2Q8N158 579 aa11.96□□□□□ -0.49
VPS8-227ENST00000625842 MRPS31Q92665 395 aaKnown RBP11.96□□□□□ -0.49
VPS8-227ENST00000625842 EAF2Q96CJ1 260 aaPredicted RBP11.96□□□□□ -0.49
VPS8-227ENST00000625842 MRFAP1L1Q96HT8 127 aa11.96□□□□□ -0.49
VPS8-227ENST00000625842 SLITRK1Q96PX8 696 aa11.96□□□□□ -0.49
VPS8-227ENST00000625842 NUF2Q9BZD4 464 aa11.96□□□□□ -0.49
VPS8-227ENST00000625842 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.96□□□□□ -0.49
VPS8-227ENST00000625842 CDR2Q01850 454 aa11.96□□□□□ -0.5
VPS8-227ENST00000625842 SLC45A4Q5BKX6 768 aa11.96□□□□□ -0.5
VPS8-227ENST00000625842 MAP3K21Q5TCX8 1036 aa11.96□□□□□ -0.5
VPS8-227ENST00000625842 PPP1R16BQ96T49 567 aa11.96□□□□□ -0.5
VPS8-227ENST00000625842 DNAJC25Q9H1X3 360 aa11.96□□□□□ -0.5
VPS8-227ENST00000625842 A6NNZ2 444 aa11.96□□□□□ -0.5
VPS8-227ENST00000625842 PSMD14O00487 310 aa11.96□□□□□ -0.5
VPS8-227ENST00000625842 STRNO43815 780 aa11.96□□□□□ -0.5
VPS8-227ENST00000625842 XYLBO75191 536 aa11.96□□□□□ -0.5
VPS8-227ENST00000625842 GPC4O75487 556 aa11.96□□□□□ -0.5
VPS8-227ENST00000625842 KRT15P19012 456 aa11.96□□□□□ -0.5
VPS8-227ENST00000625842 PDIA3P30101 505 aaKnown RBP11.96□□□□□ -0.5
VPS8-227ENST00000625842 TUBB8Q3ZCM7 444 aa11.96□□□□□ -0.5
VPS8-227ENST00000625842 INTS8Q75QN2 995 aaKnown RBP11.96□□□□□ -0.5
VPS8-227ENST00000625842 SAMD3Q8N6K7 520 aa11.96□□□□□ -0.5
VPS8-227ENST00000625842 VPS37BQ9H9H4 285 aa11.96□□□□□ -0.5
VPS8-227ENST00000625842 PCDHA6Q9UN73 950 aa11.96□□□□□ -0.5
VPS8-227ENST00000625842 PCDHA8Q9Y5H6 950 aa11.96□□□□□ -0.5
VPS8-227ENST00000625842 SCINQ9Y6U3 715 aa11.96□□□□□ -0.5
VPS8-227ENST00000625842 CEP104O60308 925 aa11.95□□□□□ -0.5
VPS8-227ENST00000625842 CACNB3P54284 484 aa11.95□□□□□ -0.5
VPS8-227ENST00000625842 PHKG1Q16816 387 aa11.95□□□□□ -0.5
VPS8-227ENST00000625842 E4F1Q66K89 784 aaPredicted RBP11.95□□□□□ -0.5
VPS8-227ENST00000625842 RWDD4Q6NW29 188 aaKnown RBP11.95□□□□□ -0.5
VPS8-227ENST00000625842 TBC1D32Q96NH3 1257 aa11.95□□□□□ -0.5
VPS8-227ENST00000625842 NCOA5Q9HCD5 579 aaKnown RBP11.95□□□□□ -0.5
VPS8-227ENST00000625842 ARFGAP3Q9NP61 516 aa11.95□□□□□ -0.5
VPS8-227ENST00000625842 HOMER3Q9NSC5 361 aa11.95□□□□□ -0.5
VPS8-227ENST00000625842 UTP6Q9NYH9 597 aaKnown RBP11.95□□□□□ -0.5
VPS8-227ENST00000625842 ERAP1Q9NZ08 941 aa11.95□□□□□ -0.5
VPS8-227ENST00000625842 hCG_1642624A0A1W2PR95 340 aa11.95□□□□□ -0.5
VPS8-227ENST00000625842 CCDC151A5D8V7 595 aa11.95□□□□□ -0.5
VPS8-227ENST00000625842 TBXAS1P24557 533 aaPredicted RBP11.95□□□□□ -0.5
VPS8-227ENST00000625842 SF3B3Q15393 1217 aaKnown RBP11.95□□□□□ -0.5
VPS8-227ENST00000625842 C20orf194Q5TEA3 1177 aa11.95□□□□□ -0.5
VPS8-227ENST00000625842 IFT20Q8IY31 132 aa11.95□□□□□ -0.5
VPS8-227ENST00000625842 BAG1Q99933 345 aaPredicted RBP11.95□□□□□ -0.5
VPS8-227ENST00000625842 PUS3Q9BZE2 481 aaKnown RBP11.95□□□□□ -0.5
VPS8-227ENST00000625842 SEL1LQ9UBV2 794 aa11.95□□□□□ -0.5
VPS8-227ENST00000625842 PTPRMP28827 1452 aa11.95□□□□□ -0.5
VPS8-227ENST00000625842 C1orf167Q5SNV9 1468 aa11.95□□□□□ -0.5
VPS8-227ENST00000625842 ABCC12Q96J65 1359 aa11.95□□□□□ -0.5
VPS8-227ENST00000625842 DNMT1P26358 1616 aaKnown RBP11.95□□□□□ -0.5
VPS8-227ENST00000625842 TTC37Q6PGP7 1564 aa11.95□□□□□ -0.5
VPS8-227ENST00000625842 CYP2C9P11712 490 aa11.95□□□□□ -0.5
VPS8-227ENST00000625842 TERF1P54274 439 aa11.95□□□□□ -0.5
VPS8-227ENST00000625842 DCUN1D1Q96GG9 259 aa11.95□□□□□ -0.5
VPS8-227ENST00000625842 KIF2CQ99661 725 aa11.95□□□□□ -0.5
VPS8-227ENST00000625842 MXD3Q9BW11 206 aa11.95□□□□□ -0.5
VPS8-227ENST00000625842 MAPK8IP1Q9UQF2 711 aa11.95□□□□□ -0.5
VPS8-227ENST00000625842 HBP1O60381 514 aa11.95□□□□□ -0.5
VPS8-227ENST00000625842 CFAP221Q4G0U5 840 aa11.95□□□□□ -0.5
VPS8-227ENST00000625842 MYSM1Q5VVJ2 828 aa11.95□□□□□ -0.5
VPS8-227ENST00000625842 C8orf74Q6P047 294 aa11.95□□□□□ -0.5
VPS8-227ENST00000625842 KLC3Q6P597 504 aa11.95□□□□□ -0.5
VPS8-227ENST00000625842 HVCN1Q96D96 273 aa11.95□□□□□ -0.5
VPS8-227ENST00000625842 GAS2O43903 313 aaKnown RBP11.94□□□□□ -0.5
VPS8-227ENST00000625842 TRPA1O75762 1119 aa11.94□□□□□ -0.5
VPS8-227ENST00000625842 ALDH1A2O94788 518 aa11.94□□□□□ -0.5
VPS8-227ENST00000625842 SEC24BO95487 1268 aa11.94□□□□□ -0.5
VPS8-227ENST00000625842 TBCCQ15814 346 aa11.94□□□□□ -0.5
VPS8-227ENST00000625842 XKR3Q5GH77 459 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms