RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 UQCRHLA0A096LP55 91 aa18.05■□□□□ 0.48
LDB3-208ENST00000623007 COBLO75128 1261 aa18.05■□□□□ 0.48
LDB3-208ENST00000623007 UQCRHP07919 91 aa18.05■□□□□ 0.48
LDB3-208ENST00000623007 NR3C2P08235 984 aa18.05■□□□□ 0.48
LDB3-208ENST00000623007 FXR1P51114 621 aaKnown RBP eCLIP18.05■□□□□ 0.48
LDB3-208ENST00000623007 PSMC5P62195 406 aa18.05■□□□□ 0.48
LDB3-208ENST00000623007 SNRPFP62306 86 aaKnown RBP18.05■□□□□ 0.48
LDB3-208ENST00000623007 MYBPC2Q14324 1141 aa18.05■□□□□ 0.48
LDB3-208ENST00000623007 TMEM132BQ14DG7 1078 aa18.05■□□□□ 0.48
LDB3-208ENST00000623007 PNMA8AQ86V59 439 aaPredicted RBP18.05■□□□□ 0.48
LDB3-208ENST00000623007 CPLX3Q8WVH0 158 aa18.05■□□□□ 0.48
LDB3-208ENST00000623007 PCMTD1Q96MG8 357 aaPredicted RBP18.05■□□□□ 0.48
LDB3-208ENST00000623007 SAMM50Q9Y512 469 aa18.05■□□□□ 0.48
LDB3-208ENST00000623007 A0A0G2JLL6 359 aaPredicted RBP18.04■□□□□ 0.48
LDB3-208ENST00000623007 IPO7O95373 1038 aaKnown RBP18.04■□□□□ 0.48
LDB3-208ENST00000623007 MYCLP12524 364 aaPredicted RBP18.04■□□□□ 0.48
LDB3-208ENST00000623007 ADAM9Q13443 819 aa18.04■□□□□ 0.48
LDB3-208ENST00000623007 SYCP1Q15431 976 aa18.04■□□□□ 0.48
LDB3-208ENST00000623007 FASTKD5Q7L8L6 764 aaKnown RBP18.04■□□□□ 0.48
LDB3-208ENST00000623007 ARMC9Q7Z3E5 817 aa18.04■□□□□ 0.48
LDB3-208ENST00000623007 PRRT2Q7Z6L0 340 aaPredicted RBP18.04■□□□□ 0.48
LDB3-208ENST00000623007 CCDC170Q8IYT3 715 aa18.04■□□□□ 0.48
LDB3-208ENST00000623007 TXLNBQ8N3L3 684 aa18.04■□□□□ 0.48
LDB3-208ENST00000623007 GTF3C2Q8WUA4 911 aaPredicted RBP18.04■□□□□ 0.48
LDB3-208ENST00000623007 MKNK1Q9BUB5 465 aa18.04■□□□□ 0.48
LDB3-208ENST00000623007 RUSC1Q9BVN2 902 aa18.04■□□□□ 0.48
LDB3-208ENST00000623007 CYP39A1Q9NYL5 469 aa18.04■□□□□ 0.48
LDB3-208ENST00000623007 MYO1AQ9UBC5 1043 aa18.04■□□□□ 0.48
LDB3-208ENST00000623007 POLR2AP24928 1970 aaKnown RBP18.03■□□□□ 0.48
LDB3-208ENST00000623007 SPDYE5A6NIY4 337 aa18.03■□□□□ 0.48
LDB3-208ENST00000623007 USP27XA6NNY8 438 aa18.03■□□□□ 0.48
LDB3-208ENST00000623007 GRIN3BO60391 1043 aa18.03■□□□□ 0.48
LDB3-208ENST00000623007 GCNT3O95395 438 aa18.03■□□□□ 0.48
LDB3-208ENST00000623007 SLC25A27O95847 323 aa18.03■□□□□ 0.48
LDB3-208ENST00000623007 SCP2P22307 547 aa18.03■□□□□ 0.48
LDB3-208ENST00000623007 EPHX2P34913 555 aa18.03■□□□□ 0.48
LDB3-208ENST00000623007 LRRC41Q15345 812 aa18.03■□□□□ 0.48
LDB3-208ENST00000623007 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.03■□□□□ 0.48
LDB3-208ENST00000623007 OTUD6AQ7L8S5 288 aa18.03■□□□□ 0.48
LDB3-208ENST00000623007 HS2ST1Q7LGA3 356 aa18.03■□□□□ 0.48
LDB3-208ENST00000623007 RIOX2Q8IUF8 465 aa18.03■□□□□ 0.48
LDB3-208ENST00000623007 FAM178BQ8IXR5 827 aa18.03■□□□□ 0.48
LDB3-208ENST00000623007 MYCT1Q8N699 235 aa18.03■□□□□ 0.48
LDB3-208ENST00000623007 IL31RAQ8NI17 732 aa18.03■□□□□ 0.48
LDB3-208ENST00000623007 TMEM174Q8WUU8 243 aa18.03■□□□□ 0.48
LDB3-208ENST00000623007 ATP6V0A1Q93050 837 aa18.03■□□□□ 0.48
LDB3-208ENST00000623007 DRC1Q96MC2 740 aa18.03■□□□□ 0.48
LDB3-208ENST00000623007 TTYH3Q9C0H2 523 aa18.03■□□□□ 0.48
LDB3-208ENST00000623007 DAAM1Q9Y4D1 1078 aa18.03■□□□□ 0.48
LDB3-208ENST00000623007 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.03■□□□□ 0.48
LDB3-208ENST00000623007 A0A0G2JMZ2 1700 aa18.03■□□□□ 0.48
LDB3-208ENST00000623007 LOC102724159A0A0B4J2E5 919 aa18.03■□□□□ 0.48
LDB3-208ENST00000623007 NPHP3-ACAD11A0A0J9YXS1 232 aa18.03■□□□□ 0.48
LDB3-208ENST00000623007 TTC26A0AVF1 554 aa18.03■□□□□ 0.48
LDB3-208ENST00000623007 TESPA1A2RU30 521 aaPredicted RBP18.03■□□□□ 0.48
LDB3-208ENST00000623007 NR2F2P24468 414 aa18.03■□□□□ 0.48
LDB3-208ENST00000623007 CYLC1P35663 651 aaPredicted RBP18.03■□□□□ 0.48
LDB3-208ENST00000623007 KRT83P78385 493 aa18.03■□□□□ 0.48
LDB3-208ENST00000623007 PPIL2Q13356 520 aa18.03■□□□□ 0.48
LDB3-208ENST00000623007 PWP2Q15269 919 aaKnown RBP18.03■□□□□ 0.48
LDB3-208ENST00000623007 MEA1Q16626 185 aa18.03■□□□□ 0.48
LDB3-208ENST00000623007 TRIM59Q8IWR1 403 aa18.03■□□□□ 0.48
LDB3-208ENST00000623007 PIGOQ8TEQ8 1089 aa18.03■□□□□ 0.48
LDB3-208ENST00000623007 UIMC1Q96RL1 719 aa18.03■□□□□ 0.48
LDB3-208ENST00000623007 TMEM206Q9H813 350 aa18.03■□□□□ 0.48
LDB3-208ENST00000623007 C17orf75Q9HAS0 396 aa18.03■□□□□ 0.48
LDB3-208ENST00000623007 KCNH4Q9UQ05 1017 aa18.03■□□□□ 0.48
LDB3-208ENST00000623007 PCDHA10Q9Y5I2 948 aa18.03■□□□□ 0.48
LDB3-208ENST00000623007 PTPRFP10586 1907 aa18.02■□□□□ 0.48
LDB3-208ENST00000623007 IRF6O14896 467 aa18.02■□□□□ 0.47
LDB3-208ENST00000623007 EPB41P11171 864 aaKnown RBP18.02■□□□□ 0.47
LDB3-208ENST00000623007 HNRNPH3P31942 346 aaKnown RBP18.02■□□□□ 0.47
LDB3-208ENST00000623007 IRX3P78415 501 aaPredicted RBP18.02■□□□□ 0.47
LDB3-208ENST00000623007 ITGB3BPQ13352 177 aaPredicted RBP18.02■□□□□ 0.47
LDB3-208ENST00000623007 DGKZQ13574 1117 aa18.02■□□□□ 0.47
LDB3-208ENST00000623007 TUBB2AQ13885 445 aa18.02■□□□□ 0.47
LDB3-208ENST00000623007 STXBP2Q15833 593 aa18.02■□□□□ 0.47
LDB3-208ENST00000623007 REXO1L1PQ8IX06 675 aa18.02■□□□□ 0.47
LDB3-208ENST00000623007 TUBB2BQ9BVA1 445 aa18.02■□□□□ 0.47
LDB3-208ENST00000623007 MOV10L1Q9BXT6 1211 aaKnown RBP18.02■□□□□ 0.47
LDB3-208ENST00000623007 A1CFQ9NQ94 594 aaKnown RBP18.02■□□□□ 0.47
LDB3-208ENST00000623007 TBC1D7Q9P0N9 293 aa18.02■□□□□ 0.47
LDB3-208ENST00000623007 RIPK3Q9Y572 518 aa18.02■□□□□ 0.47
LDB3-208ENST00000623007 ADGRG1Q9Y653 693 aa18.02■□□□□ 0.47
LDB3-208ENST00000623007 OTOFQ9HC10 1997 aa18.01■□□□□ 0.47
LDB3-208ENST00000623007 GLTPD2A6NH11 291 aa18.01■□□□□ 0.47
LDB3-208ENST00000623007 EIF3JO75822 258 aaKnown RBP18.01■□□□□ 0.47
LDB3-208ENST00000623007 ICAM3P32942 547 aa18.01■□□□□ 0.47
LDB3-208ENST00000623007 RAD51AP2Q09MP3 1159 aa18.01■□□□□ 0.47
LDB3-208ENST00000623007 PADI6Q6TGC4 694 aa18.01■□□□□ 0.47
LDB3-208ENST00000623007 ZNF662Q6ZS27 426 aa18.01■□□□□ 0.47
LDB3-208ENST00000623007 NELFCDQ8IXH7 590 aa18.01■□□□□ 0.47
LDB3-208ENST00000623007 NEK11Q8NG66 645 aa18.01■□□□□ 0.47
LDB3-208ENST00000623007 CDCA5Q96FF9 252 aa18.01■□□□□ 0.47
LDB3-208ENST00000623007 ST6GALNAC4Q9H4F1 302 aa18.01■□□□□ 0.47
LDB3-208ENST00000623007 ARMCX3Q9UH62 379 aaPredicted RBP18.01■□□□□ 0.47
LDB3-208ENST00000623007 PSAPP07602 524 aa18■□□□□ 0.47
LDB3-208ENST00000623007 YBX3P16989 372 aaKnown RBP eCLIP18■□□□□ 0.47
LDB3-208ENST00000623007 YWHABP31946 246 aaKnown RBP18■□□□□ 0.47
LDB3-208ENST00000623007 PLS1Q14651 629 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms