RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 KPNA6O60684 536 aa22.21■■□□□ 1.15
PDLIM2-221ENST00000622702 DKC1O60832 514 aaKnown RBP eCLIP22.21■■□□□ 1.15
PDLIM2-221ENST00000622702 LYPLA2O95372 231 aa22.21■■□□□ 1.15
PDLIM2-221ENST00000622702 LGALS2P05162 132 aa22.21■■□□□ 1.15
PDLIM2-221ENST00000622702 STAT5BP51692 787 aa22.21■■□□□ 1.15
PDLIM2-221ENST00000622702 RTP1P59025 263 aa22.21■■□□□ 1.15
PDLIM2-221ENST00000622702 PURAQ00577 322 aaKnown RBP22.21■■□□□ 1.15
PDLIM2-221ENST00000622702 SNX17Q15036 470 aa22.21■■□□□ 1.15
PDLIM2-221ENST00000622702 UGCGQ16739 394 aa22.21■■□□□ 1.15
PDLIM2-221ENST00000622702 PLPPR4Q7Z2D5 763 aa22.21■■□□□ 1.15
PDLIM2-221ENST00000622702 C7orf61Q8IZ16 206 aa22.21■■□□□ 1.15
PDLIM2-221ENST00000622702 FSIP1Q8NA03 581 aa22.21■■□□□ 1.15
PDLIM2-221ENST00000622702 BANK1Q8NDB2 785 aa22.21■■□□□ 1.15
PDLIM2-221ENST00000622702 CALML4Q96GE6 196 aa22.21■■□□□ 1.15
PDLIM2-221ENST00000622702 C16orf70Q9BSU1 422 aa22.21■■□□□ 1.15
PDLIM2-221ENST00000622702 SMARCAD1Q9H4L7 1026 aa22.21■■□□□ 1.15
PDLIM2-221ENST00000622702 POTEB3A0JP26 581 aa22.2■■□□□ 1.14
PDLIM2-221ENST00000622702 PFKFB1P16118 471 aa22.2■■□□□ 1.14
PDLIM2-221ENST00000622702 SLC26A2P50443 739 aa22.2■■□□□ 1.14
PDLIM2-221ENST00000622702 GRB10Q13322 594 aa22.2■■□□□ 1.14
PDLIM2-221ENST00000622702 CTTNQ14247 550 aaKnown RBP22.2■■□□□ 1.14
PDLIM2-221ENST00000622702 KARSQ15046 597 aaKnown RBP22.2■■□□□ 1.14
PDLIM2-221ENST00000622702 ECM1Q16610 540 aa22.2■■□□□ 1.14
PDLIM2-221ENST00000622702 TRIM60Q495X7 471 aa22.2■■□□□ 1.14
PDLIM2-221ENST00000622702 TMEM119Q4V9L6 283 aa22.2■■□□□ 1.14
PDLIM2-221ENST00000622702 UTP14CQ5TAP6 766 aaKnown RBP22.2■■□□□ 1.14
PDLIM2-221ENST00000622702 C1orf53Q5VUE5 145 aa22.2■■□□□ 1.14
PDLIM2-221ENST00000622702 POTEBQ6S5H4 581 aa22.2■■□□□ 1.14
PDLIM2-221ENST00000622702 TPH2Q8IWU9 490 aa22.2■■□□□ 1.14
PDLIM2-221ENST00000622702 C4orf19Q8IY42 314 aa22.2■■□□□ 1.14
PDLIM2-221ENST00000622702 PNMA5Q96PV4 448 aa22.2■■□□□ 1.14
PDLIM2-221ENST00000622702 MTG1Q9BT17 334 aaPredicted RBP22.2■■□□□ 1.14
PDLIM2-221ENST00000622702 NT5C3AQ9H0P0 336 aa22.2■■□□□ 1.14
PDLIM2-221ENST00000622702 WRAP73Q9P2S5 460 aaPredicted RBP22.2■■□□□ 1.14
PDLIM2-221ENST00000622702 CCDC39Q9UFE4 941 aa22.2■■□□□ 1.14
PDLIM2-221ENST00000622702 NR2E3Q9Y5X4 410 aa22.2■■□□□ 1.14
PDLIM2-221ENST00000622702 A0A0U1RQG5 324 aaPredicted RBP22.19■■□□□ 1.14
PDLIM2-221ENST00000622702 A0A1B0GVL5 298 aa22.19■■□□□ 1.14
PDLIM2-221ENST00000622702 DDX11L8A8MPP1 907 aa22.19■■□□□ 1.14
PDLIM2-221ENST00000622702 ZNF862O60290 1169 aa22.19■■□□□ 1.14
PDLIM2-221ENST00000622702 PSMC6P62333 389 aa22.19■■□□□ 1.14
PDLIM2-221ENST00000622702 PDXDC2PQ6P474 469 aa22.19■■□□□ 1.14
PDLIM2-221ENST00000622702 TRIM50Q86XT4 487 aa22.19■■□□□ 1.14
PDLIM2-221ENST00000622702 GLG1Q92896 1179 aa22.19■■□□□ 1.14
PDLIM2-221ENST00000622702 CDK5RAP3Q96JB5 506 aa22.19■■□□□ 1.14
PDLIM2-221ENST00000622702 GOLPH3LQ9H4A5 285 aa22.19■■□□□ 1.14
PDLIM2-221ENST00000622702 KCNH3Q9ULD8 1083 aa22.19■■□□□ 1.14
PDLIM2-221ENST00000622702 MYH9P35579 1960 aaKnown RBP22.19■■□□□ 1.14
PDLIM2-221ENST00000622702 F2P00734 622 aa22.18■■□□□ 1.14
PDLIM2-221ENST00000622702 POTEGQ6S5H5 508 aa22.18■■□□□ 1.14
PDLIM2-221ENST00000622702 CCDC73Q6ZRK6 1079 aa22.18■■□□□ 1.14
PDLIM2-221ENST00000622702 RASSF8Q8NHQ8 419 aa22.18■■□□□ 1.14
PDLIM2-221ENST00000622702 PYM1Q9BRP8 204 aaKnown RBP22.18■■□□□ 1.14
PDLIM2-221ENST00000622702 ERAP1Q9NZ08 941 aa22.18■■□□□ 1.14
PDLIM2-221ENST00000622702 ZNF215Q9UL58 517 aaPredicted RBP22.18■■□□□ 1.14
PDLIM2-221ENST00000622702 KIAA1024Q9UPX6 916 aa22.18■■□□□ 1.14
PDLIM2-221ENST00000622702 A0A087X0B3 334 aa22.17■■□□□ 1.14
PDLIM2-221ENST00000622702 ARVCFO00192 962 aa22.17■■□□□ 1.14
PDLIM2-221ENST00000622702 ZNF286BP0CG31 522 aa22.17■■□□□ 1.14
PDLIM2-221ENST00000622702 PLCG1P19174 1290 aa22.17■■□□□ 1.14
PDLIM2-221ENST00000622702 ATP4AP20648 1035 aa22.17■■□□□ 1.14
PDLIM2-221ENST00000622702 NDUFA8P51970 172 aa22.17■■□□□ 1.14
PDLIM2-221ENST00000622702 TLE2Q04725 743 aa22.17■■□□□ 1.14
PDLIM2-221ENST00000622702 ITGA7Q13683 1181 aa22.17■■□□□ 1.14
PDLIM2-221ENST00000622702 ZRSR1Q15695 479 aaKnown RBP22.17■■□□□ 1.14
PDLIM2-221ENST00000622702 NACC1Q96RE7 527 aa22.17■■□□□ 1.14
PDLIM2-221ENST00000622702 DDX19AQ9NUU7 478 aaKnown RBP22.17■■□□□ 1.14
PDLIM2-221ENST00000622702 GRIN2DO15399 1336 aa22.17■■□□□ 1.14
PDLIM2-221ENST00000622702 H3BRB1 525 aa22.16■■□□□ 1.14
PDLIM2-221ENST00000622702 PQBP1O60828 265 aaKnown RBP22.16■■□□□ 1.14
PDLIM2-221ENST00000622702 STBD1O95210 358 aa22.16■■□□□ 1.14
PDLIM2-221ENST00000622702 XRCC6P12956 609 aaKnown RBP eCLIP22.16■■□□□ 1.14
PDLIM2-221ENST00000622702 CDK7P50613 346 aa22.16■■□□□ 1.14
PDLIM2-221ENST00000622702 PRKCEQ02156 737 aa22.16■■□□□ 1.14
PDLIM2-221ENST00000622702 TPRNQ4KMQ1 711 aa22.16■■□□□ 1.14
PDLIM2-221ENST00000622702 XKR3Q5GH77 459 aa22.16■■□□□ 1.14
PDLIM2-221ENST00000622702 RRAGBQ5VZM2 374 aa22.16■■□□□ 1.14
PDLIM2-221ENST00000622702 KAT2BQ92831 832 aa22.16■■□□□ 1.14
PDLIM2-221ENST00000622702 FAM167AQ96KS9 214 aa22.16■■□□□ 1.14
PDLIM2-221ENST00000622702 TUT1Q9H6E5 874 aaKnown RBP22.16■■□□□ 1.14
PDLIM2-221ENST00000622702 POLR2DO15514 142 aaKnown RBP22.15■■□□□ 1.14
PDLIM2-221ENST00000622702 OATP04181 439 aa22.15■■□□□ 1.14
PDLIM2-221ENST00000622702 SYKP43405 635 aa22.15■■□□□ 1.14
PDLIM2-221ENST00000622702 CHMP4BP1P59074 171 aa22.15■■□□□ 1.14
PDLIM2-221ENST00000622702 FAM160A1Q05DH4 1040 aa22.15■■□□□ 1.14
PDLIM2-221ENST00000622702 E2F4Q16254 413 aa22.15■■□□□ 1.14
PDLIM2-221ENST00000622702 NAALADL2Q58DX5 795 aa22.15■■□□□ 1.14
PDLIM2-221ENST00000622702 PDILTQ8N807 584 aa22.15■■□□□ 1.14
PDLIM2-221ENST00000622702 IQUBQ8NA54 791 aa22.15■■□□□ 1.14
PDLIM2-221ENST00000622702 ENGASEQ8NFI3 743 aa22.15■■□□□ 1.14
PDLIM2-221ENST00000622702 PLIN2Q99541 437 aa22.15■■□□□ 1.14
PDLIM2-221ENST00000622702 PANK2Q9BZ23 570 aa22.15■■□□□ 1.14
PDLIM2-221ENST00000622702 STK17AQ9UEE5 414 aa22.15■■□□□ 1.14
PDLIM2-221ENST00000622702 DNM3Q9UQ16 869 aa22.15■■□□□ 1.14
PDLIM2-221ENST00000622702 H0YGN5 161 aa22.15■■□□□ 1.14
PDLIM2-221ENST00000622702 HAS3O00219 553 aa22.15■■□□□ 1.14
PDLIM2-221ENST00000622702 LIG1P18858 919 aa22.15■■□□□ 1.14
PDLIM2-221ENST00000622702 PTMSP20962 102 aa22.15■■□□□ 1.14
PDLIM2-221ENST00000622702 YWHABP31946 246 aaKnown RBP22.15■■□□□ 1.14
PDLIM2-221ENST00000622702 PLCB4Q15147 1175 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms