RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 GBP4Q96PP9 640 aa6.51□□□□□ -1.37
CPNE3-213ENST00000622183 PCGF6Q9BYE7 350 aa6.51□□□□□ -1.37
CPNE3-213ENST00000622183 HSPBP1Q9NZL4 362 aa6.51□□□□□ -1.37
CPNE3-213ENST00000622183 IP6K2Q9UHH9 426 aa6.51□□□□□ -1.37
CPNE3-213ENST00000622183 MRFAP1Q9Y605 127 aa6.51□□□□□ -1.37
CPNE3-213ENST00000622183 NUDT19A8MXV4 375 aa6.5□□□□□ -1.37
CPNE3-213ENST00000622183 H2AFYO75367 372 aaKnown RBP6.5□□□□□ -1.37
CPNE3-213ENST00000622183 SDHBP21912 280 aa6.5□□□□□ -1.37
CPNE3-213ENST00000622183 AOAHP28039 575 aa6.5□□□□□ -1.37
CPNE3-213ENST00000622183 TMEM62Q0P6H9 643 aa6.5□□□□□ -1.37
CPNE3-213ENST00000622183 RAB3GAP1Q15042 981 aa6.5□□□□□ -1.37
CPNE3-213ENST00000622183 FSCN1Q16658 493 aaKnown RBP6.5□□□□□ -1.37
CPNE3-213ENST00000622183 RTN4RL1Q86UN2 441 aaPredicted RBP6.5□□□□□ -1.37
CPNE3-213ENST00000622183 PNMA8AQ86V59 439 aaPredicted RBP6.5□□□□□ -1.37
CPNE3-213ENST00000622183 CXorf67Q86X51 503 aaPredicted RBP6.5□□□□□ -1.37
CPNE3-213ENST00000622183 MIB1Q86YT6 1006 aa6.5□□□□□ -1.37
CPNE3-213ENST00000622183 FAM126BQ8IXS8 530 aa6.5□□□□□ -1.37
CPNE3-213ENST00000622183 CPA6Q8N4T0 437 aa6.5□□□□□ -1.37
CPNE3-213ENST00000622183 E2F7Q96AV8 911 aa6.5□□□□□ -1.37
CPNE3-213ENST00000622183 FOXRED1Q96CU9 486 aaPredicted RBP6.5□□□□□ -1.37
CPNE3-213ENST00000622183 INTS4Q96HW7 963 aaKnown RBP6.5□□□□□ -1.37
CPNE3-213ENST00000622183 CCM2LQ9NUG4 571 aaPredicted RBP6.5□□□□□ -1.37
CPNE3-213ENST00000622183 ASB1Q9Y576 335 aa6.5□□□□□ -1.37
CPNE3-213ENST00000622183 GOLGA6L22H0YM25 854 aa6.49□□□□□ -1.37
CPNE3-213ENST00000622183 PCDHGA12O60330 932 aa6.49□□□□□ -1.37
CPNE3-213ENST00000622183 CT47B1P0C2W7 299 aaPredicted RBP6.49□□□□□ -1.37
CPNE3-213ENST00000622183 ENPP1P22413 925 aa6.49□□□□□ -1.37
CPNE3-213ENST00000622183 DBPQ10586 325 aaPredicted RBP6.49□□□□□ -1.37
CPNE3-213ENST00000622183 LRP8Q14114 963 aa6.49□□□□□ -1.37
CPNE3-213ENST00000622183 PLEKHN1Q494U1 663 aaPredicted RBP6.49□□□□□ -1.37
CPNE3-213ENST00000622183 ADGRF1Q5T601 910 aa6.49□□□□□ -1.37
CPNE3-213ENST00000622183 CXorf57Q6NSI4 855 aaKnown RBP6.49□□□□□ -1.37
CPNE3-213ENST00000622183 ESPNLQ6ZVH7 1005 aa6.49□□□□□ -1.37
CPNE3-213ENST00000622183 CILP2Q8IUL8 1156 aa6.49□□□□□ -1.37
CPNE3-213ENST00000622183 PHYKPLQ8IUZ5 450 aa6.49□□□□□ -1.37
CPNE3-213ENST00000622183 ABI1Q8IZP0 508 aa6.49□□□□□ -1.37
CPNE3-213ENST00000622183 MAGEB6Q8N7X4 407 aa6.49□□□□□ -1.37
CPNE3-213ENST00000622183 C7orf31Q8N865 590 aa6.49□□□□□ -1.37
CPNE3-213ENST00000622183 KIRREL1Q96J84 757 aa6.49□□□□□ -1.37
CPNE3-213ENST00000622183 WNT8AQ9H1J5 351 aa6.49□□□□□ -1.37
CPNE3-213ENST00000622183 SLC6A17Q9H1V8 727 aa6.49□□□□□ -1.37
CPNE3-213ENST00000622183 SEMA4AQ9H3S1 761 aa6.49□□□□□ -1.37
CPNE3-213ENST00000622183 DTLQ9NZJ0 730 aa6.49□□□□□ -1.37
CPNE3-213ENST00000622183 BTBD7Q9P203 1132 aa6.49□□□□□ -1.37
CPNE3-213ENST00000622183 GABBR1Q9UBS5 961 aa6.49□□□□□ -1.37
CPNE3-213ENST00000622183 KCNG1Q9UIX4 513 aa6.49□□□□□ -1.37
CPNE3-213ENST00000622183 ANKRD6Q9Y2G4 727 aa6.49□□□□□ -1.37
CPNE3-213ENST00000622183 GIT1Q9Y2X7 761 aa6.49□□□□□ -1.37
CPNE3-213ENST00000622183 PCDHGA9Q9Y5G4 932 aaKnown RBP6.49□□□□□ -1.37
CPNE3-213ENST00000622183 PCDHGA8Q9Y5G5 932 aa6.49□□□□□ -1.37
CPNE3-213ENST00000622183 PCDHGA7Q9Y5G6 932 aa6.49□□□□□ -1.37
CPNE3-213ENST00000622183 PCDHGA6Q9Y5G7 932 aa6.49□□□□□ -1.37
CPNE3-213ENST00000622183 PCDHGA3Q9Y5H0 932 aa6.49□□□□□ -1.37
CPNE3-213ENST00000622183 PCDHGA2Q9Y5H1 932 aa6.49□□□□□ -1.37
CPNE3-213ENST00000622183 CCDC194A0A1B0GVG4 234 aa6.48□□□□□ -1.37
CPNE3-213ENST00000622183 UBA6A0AVT1 1052 aaPredicted RBP6.48□□□□□ -1.37
CPNE3-213ENST00000622183 KLHL33A6NCF5 533 aa6.48□□□□□ -1.37
CPNE3-213ENST00000622183 U2AF1L5P0DN76 240 aaPredicted RBP6.48□□□□□ -1.37
CPNE3-213ENST00000622183 ATF3P18847 181 aa6.48□□□□□ -1.37
CPNE3-213ENST00000622183 MANFP55145 182 aaKnown RBP6.48□□□□□ -1.37
CPNE3-213ENST00000622183 YBX1P67809 324 aaKnown RBP6.48□□□□□ -1.37
CPNE3-213ENST00000622183 U2AF1Q01081 240 aaKnown RBP eCLIP6.48□□□□□ -1.37
CPNE3-213ENST00000622183 ODF1Q14990 250 aa6.48□□□□□ -1.37
CPNE3-213ENST00000622183 TTC38Q5R3I4 469 aa6.48□□□□□ -1.37
CPNE3-213ENST00000622183 FYB2Q5VWT5 728 aa6.48□□□□□ -1.37
CPNE3-213ENST00000622183 CMTR2Q8IYT2 770 aaKnown RBP6.48□□□□□ -1.37
CPNE3-213ENST00000622183 HIPK4Q8NE63 616 aa6.48□□□□□ -1.37
CPNE3-213ENST00000622183 TTC8Q8TAM2 541 aa6.48□□□□□ -1.37
CPNE3-213ENST00000622183 TGFBRAP1Q8WUH2 860 aa6.48□□□□□ -1.37
CPNE3-213ENST00000622183 SSH1Q8WYL5 1049 aa6.48□□□□□ -1.37
CPNE3-213ENST00000622183 TOE1Q96GM8 510 aaKnown RBP6.48□□□□□ -1.37
CPNE3-213ENST00000622183 POFUT1Q9H488 388 aa6.48□□□□□ -1.37
CPNE3-213ENST00000622183 KLHL14Q9P2G3 628 aa6.48□□□□□ -1.37
CPNE3-213ENST00000622183 PNMA8BQ9ULN7 279 aaPredicted RBP6.48□□□□□ -1.37
CPNE3-213ENST00000622183 HCFC2Q9Y5Z7 792 aa6.48□□□□□ -1.37
CPNE3-213ENST00000622183 OR14I1A6ND48 311 aa6.47□□□□□ -1.37
CPNE3-213ENST00000622183 ABLIM1O14639 778 aa6.47□□□□□ -1.37
CPNE3-213ENST00000622183 XPOTO43592 962 aaKnown RBP6.47□□□□□ -1.37
CPNE3-213ENST00000622183 ADAM23O75077 832 aa6.47□□□□□ -1.37
CPNE3-213ENST00000622183 LRG1P02750 347 aa6.47□□□□□ -1.37
CPNE3-213ENST00000622183 PF4V1P10720 104 aa6.47□□□□□ -1.37
CPNE3-213ENST00000622183 GNALP38405 381 aa6.47□□□□□ -1.37
CPNE3-213ENST00000622183 MLC1Q15049 377 aa6.47□□□□□ -1.37
CPNE3-213ENST00000622183 CLUL1Q15846 466 aa6.47□□□□□ -1.37
CPNE3-213ENST00000622183 CD276Q5ZPR3 534 aa6.47□□□□□ -1.37
CPNE3-213ENST00000622183 CCSAPQ6IQ19 270 aaPredicted RBP6.47□□□□□ -1.37
CPNE3-213ENST00000622183 TIGD7Q6NT04 549 aaPredicted RBP6.47□□□□□ -1.37
CPNE3-213ENST00000622183 ZC3H14Q6PJT7 736 aaKnown RBP6.47□□□□□ -1.37
CPNE3-213ENST00000622183 TEPPQ6URK8 271 aa6.47□□□□□ -1.37
CPNE3-213ENST00000622183 ETV3LQ6ZN32 361 aa6.47□□□□□ -1.37
CPNE3-213ENST00000622183 TTLL7Q6ZT98 887 aa6.47□□□□□ -1.37
CPNE3-213ENST00000622183 C14orf80Q86SX3 495 aa6.47□□□□□ -1.37
CPNE3-213ENST00000622183 ATG4DQ86TL0 474 aaPredicted RBP6.47□□□□□ -1.37
CPNE3-213ENST00000622183 AMIGO3Q86WK7 504 aa6.47□□□□□ -1.37
CPNE3-213ENST00000622183 ERCC4Q92889 916 aaPredicted RBP6.47□□□□□ -1.37
CPNE3-213ENST00000622183 NUP88Q99567 741 aaPredicted RBP6.47□□□□□ -1.37
CPNE3-213ENST00000622183 FOXB1Q99853 325 aa6.47□□□□□ -1.37
CPNE3-213ENST00000622183 ANO3Q9BYT9 981 aa6.47□□□□□ -1.37
CPNE3-213ENST00000622183 ZNF277Q9NRM2 450 aaPredicted RBP6.47□□□□□ -1.37
CPNE3-213ENST00000622183 SLC52A1Q9NWF4 448 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms