RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 AFG1LQ8WV93 481 aa13.78□□□□□ -0.2
SCAMP1-207ENST00000621999 TNFRSF25Q93038 417 aa13.78□□□□□ -0.2
SCAMP1-207ENST00000621999 ABHD16BQ9H3Z7 469 aa13.78□□□□□ -0.2
SCAMP1-207ENST00000621999 SRCAPQ6ZRS2 3230 aa13.78□□□□□ -0.2
SCAMP1-207ENST00000621999 HSD17B4P51659 736 aa13.78□□□□□ -0.2
SCAMP1-207ENST00000621999 RHPN2Q8IUC4 686 aa13.78□□□□□ -0.2
SCAMP1-207ENST00000621999 COPS5Q92905 334 aa13.78□□□□□ -0.2
SCAMP1-207ENST00000621999 TINF2Q9BSI4 451 aa13.78□□□□□ -0.2
SCAMP1-207ENST00000621999 PUF60Q9UHX1 559 aaKnown RBP13.78□□□□□ -0.2
SCAMP1-207ENST00000621999 MYMKA6NI61 221 aa13.78□□□□□ -0.2
SCAMP1-207ENST00000621999 ATP9AO75110 1047 aa13.78□□□□□ -0.2
SCAMP1-207ENST00000621999 NPY5RQ15761 445 aa13.78□□□□□ -0.2
SCAMP1-207ENST00000621999 ZNF746Q6NUN9 644 aaPredicted RBP13.78□□□□□ -0.2
SCAMP1-207ENST00000621999 TMEM143Q96AN5 459 aa13.78□□□□□ -0.2
SCAMP1-207ENST00000621999 NFX1Q12986 1120 aaKnown RBP13.78□□□□□ -0.2
SCAMP1-207ENST00000621999 COASYQ13057 564 aa13.78□□□□□ -0.2
SCAMP1-207ENST00000621999 GRB10Q13322 594 aa13.78□□□□□ -0.2
SCAMP1-207ENST00000621999 HAS1Q92839 578 aa13.78□□□□□ -0.2
SCAMP1-207ENST00000621999 EML1O00423 815 aa13.77□□□□□ -0.2
SCAMP1-207ENST00000621999 HIP1RO75146 1068 aa13.77□□□□□ -0.2
SCAMP1-207ENST00000621999 CYP3A4P08684 503 aa13.77□□□□□ -0.2
SCAMP1-207ENST00000621999 NR2F2P24468 414 aa13.77□□□□□ -0.2
SCAMP1-207ENST00000621999 APLP1P51693 650 aa13.77□□□□□ -0.2
SCAMP1-207ENST00000621999 OTOP1Q7RTM1 612 aa13.77□□□□□ -0.2
SCAMP1-207ENST00000621999 CCDC186Q7Z3E2 898 aa13.77□□□□□ -0.2
SCAMP1-207ENST00000621999 GPIHBP1Q8IV16 184 aa13.77□□□□□ -0.2
SCAMP1-207ENST00000621999 MTRQ99707 1265 aa13.77□□□□□ -0.2
SCAMP1-207ENST00000621999 IMPG2Q9BZV3 1241 aa13.77□□□□□ -0.2
SCAMP1-207ENST00000621999 ARAP2Q8WZ64 1704 aa13.77□□□□□ -0.2
SCAMP1-207ENST00000621999 ZNF536O15090 1300 aa13.77□□□□□ -0.2
SCAMP1-207ENST00000621999 UNCXA6NJT0 531 aa13.77□□□□□ -0.21
SCAMP1-207ENST00000621999 H0YCG3 227 aa13.77□□□□□ -0.21
SCAMP1-207ENST00000621999 RSPH3Q86UC2 560 aa13.77□□□□□ -0.21
SCAMP1-207ENST00000621999 ENGASEQ8NFI3 743 aa13.77□□□□□ -0.21
SCAMP1-207ENST00000621999 PSPC1Q8WXF1 523 aaKnown RBP13.77□□□□□ -0.21
SCAMP1-207ENST00000621999 P2RX5Q93086 422 aa13.77□□□□□ -0.21
SCAMP1-207ENST00000621999 TNNI1P19237 187 aa13.77□□□□□ -0.21
SCAMP1-207ENST00000621999 FLT3LGP49771 235 aa13.77□□□□□ -0.21
SCAMP1-207ENST00000621999 MAP2K5Q13163 448 aa13.77□□□□□ -0.21
SCAMP1-207ENST00000621999 ACVR2BQ13705 512 aa13.77□□□□□ -0.21
SCAMP1-207ENST00000621999 SPATA1Q5VX52 437 aa13.77□□□□□ -0.21
SCAMP1-207ENST00000621999 TRIM50Q86XT4 487 aa13.77□□□□□ -0.21
SCAMP1-207ENST00000621999 ZNF784Q8NCA9 323 aaPredicted RBP13.77□□□□□ -0.21
SCAMP1-207ENST00000621999 SOCS4Q8WXH5 440 aa13.77□□□□□ -0.21
SCAMP1-207ENST00000621999 ZNF830Q96NB3 372 aaPredicted RBP13.77□□□□□ -0.21
SCAMP1-207ENST00000621999 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.77□□□□□ -0.21
SCAMP1-207ENST00000621999 APOL6Q9BWW8 343 aa13.77□□□□□ -0.21
SCAMP1-207ENST00000621999 SLC15A5A6NIM6 579 aa13.76□□□□□ -0.21
SCAMP1-207ENST00000621999 TLR2O60603 784 aa13.76□□□□□ -0.21
SCAMP1-207ENST00000621999 GJA5P36382 358 aa13.76□□□□□ -0.21
SCAMP1-207ENST00000621999 PSMC6P62333 389 aa13.76□□□□□ -0.21
SCAMP1-207ENST00000621999 EXOC8Q8IYI6 725 aa13.76□□□□□ -0.21
SCAMP1-207ENST00000621999 ACTN4O43707 911 aaKnown RBP13.76□□□□□ -0.21
SCAMP1-207ENST00000621999 DLATP10515 647 aaKnown RBP13.76□□□□□ -0.21
SCAMP1-207ENST00000621999 TGFB3P10600 412 aa13.76□□□□□ -0.21
SCAMP1-207ENST00000621999 NOVP48745 357 aa13.76□□□□□ -0.21
SCAMP1-207ENST00000621999 OSTNP61366 133 aa13.76□□□□□ -0.21
SCAMP1-207ENST00000621999 DGKDQ16760 1214 aa13.76□□□□□ -0.21
SCAMP1-207ENST00000621999 ZFYVE27Q5T4F4 411 aa13.76□□□□□ -0.21
SCAMP1-207ENST00000621999 SHCBP1Q8NEM2 672 aa13.76□□□□□ -0.21
SCAMP1-207ENST00000621999 REEP2Q9BRK0 252 aa13.76□□□□□ -0.21
SCAMP1-207ENST00000621999 ADPGKQ9BRR6 497 aa13.76□□□□□ -0.21
SCAMP1-207ENST00000621999 ARMCX3Q9UH62 379 aaPredicted RBP13.76□□□□□ -0.21
SCAMP1-207ENST00000621999 KCNJ18B7U540 433 aa13.76□□□□□ -0.21
SCAMP1-207ENST00000621999 CIITAP33076 1130 aa13.76□□□□□ -0.21
SCAMP1-207ENST00000621999 PRCPP42785 496 aa13.76□□□□□ -0.21
SCAMP1-207ENST00000621999 PPFIA1Q13136 1202 aa13.76□□□□□ -0.21
SCAMP1-207ENST00000621999 KCNJ12Q14500 433 aa13.76□□□□□ -0.21
SCAMP1-207ENST00000621999 METTL7BQ6UX53 244 aa13.76□□□□□ -0.21
SCAMP1-207ENST00000621999 TEX2Q8IWB9 1127 aa13.76□□□□□ -0.21
SCAMP1-207ENST00000621999 LRRC71Q8N4P6 559 aa13.76□□□□□ -0.21
SCAMP1-207ENST00000621999 MTMR9Q96QG7 549 aa13.76□□□□□ -0.21
SCAMP1-207ENST00000621999 ACCSQ96QU6 501 aa13.76□□□□□ -0.21
SCAMP1-207ENST00000621999 GBP3Q9H0R5 595 aa13.76□□□□□ -0.21
SCAMP1-207ENST00000621999 POLR3FQ9H1D9 316 aaPredicted RBP13.76□□□□□ -0.21
SCAMP1-207ENST00000621999 PDGFCQ9NRA1 345 aa13.76□□□□□ -0.21
SCAMP1-207ENST00000621999 PGAP2Q9UHJ9 254 aa13.76□□□□□ -0.21
SCAMP1-207ENST00000621999 PVALEFA0A1B0GWK0 134 aa13.76□□□□□ -0.21
SCAMP1-207ENST00000621999 TMEM150BA6NC51 233 aa13.76□□□□□ -0.21
SCAMP1-207ENST00000621999 ZBTB39O15060 712 aa13.76□□□□□ -0.21
SCAMP1-207ENST00000621999 CA12O43570 354 aa13.76□□□□□ -0.21
SCAMP1-207ENST00000621999 NMT1P30419 496 aaKnown RBP13.76□□□□□ -0.21
SCAMP1-207ENST00000621999 APBB1IPQ7Z5R6 666 aaPredicted RBP13.76□□□□□ -0.21
SCAMP1-207ENST00000621999 ZBTB33Q86T24 672 aa13.76□□□□□ -0.21
SCAMP1-207ENST00000621999 DHTKD1Q96HY7 919 aaPredicted RBP13.76□□□□□ -0.21
SCAMP1-207ENST00000621999 POLR3CQ9BUI4 534 aaPredicted RBP13.76□□□□□ -0.21
SCAMP1-207ENST00000621999 SAMSN1Q9NSI8 373 aaKnown RBP13.76□□□□□ -0.21
SCAMP1-207ENST00000621999 ERAP1Q9NZ08 941 aa13.76□□□□□ -0.21
SCAMP1-207ENST00000621999 NRXN2Q9P2S2 1712 aa13.75□□□□□ -0.21
SCAMP1-207ENST00000621999 TRIM49BA6NDI0 452 aa13.75□□□□□ -0.21
SCAMP1-207ENST00000621999 MRPS9P82933 396 aaKnown RBP13.75□□□□□ -0.21
SCAMP1-207ENST00000621999 PSMD2Q13200 908 aa13.75□□□□□ -0.21
SCAMP1-207ENST00000621999 RAPGEF1Q13905 1077 aa13.75□□□□□ -0.21
SCAMP1-207ENST00000621999 NEK11Q8NG66 645 aa13.75□□□□□ -0.21
SCAMP1-207ENST00000621999 SLC5A5Q92911 643 aa13.75□□□□□ -0.21
SCAMP1-207ENST00000621999 SUPT20HL2P0C7V6 817 aa13.75□□□□□ -0.21
SCAMP1-207ENST00000621999 ERCC5P28715 1186 aaPredicted RBP13.75□□□□□ -0.21
SCAMP1-207ENST00000621999 IGSF22Q8N9C0 903 aa13.75□□□□□ -0.21
SCAMP1-207ENST00000621999 SHISA4Q96DD7 197 aa13.75□□□□□ -0.21
SCAMP1-207ENST00000621999 CRACR2AQ9BSW2 395 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms