RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 GRIK4Q16099 956 aa16.09■□□□□ 0.17
CBWD3-217ENST00000621474 TRIM71Q2Q1W2 868 aaKnown RBP16.09■□□□□ 0.17
CBWD3-217ENST00000621474 TRMT1LQ7Z2T5 733 aaKnown RBP16.09■□□□□ 0.17
CBWD3-217ENST00000621474 SERINC5Q86VE9 423 aa16.09■□□□□ 0.17
CBWD3-217ENST00000621474 IGSF22Q8N9C0 903 aa16.09■□□□□ 0.17
CBWD3-217ENST00000621474 BBXQ8WY36 941 aaPredicted RBP16.09■□□□□ 0.17
CBWD3-217ENST00000621474 TRPC6Q9Y210 931 aa16.09■□□□□ 0.17
CBWD3-217ENST00000621474 TMEM150BA6NC51 233 aa16.08■□□□□ 0.17
CBWD3-217ENST00000621474 HBP1O60381 514 aa16.08■□□□□ 0.17
CBWD3-217ENST00000621474 SLITRK3O94933 977 aa16.08■□□□□ 0.17
CBWD3-217ENST00000621474 F13A1P00488 732 aa16.08■□□□□ 0.17
CBWD3-217ENST00000621474 PDIA4P13667 645 aaKnown RBP16.08■□□□□ 0.17
CBWD3-217ENST00000621474 PRPHP41219 470 aa16.08■□□□□ 0.17
CBWD3-217ENST00000621474 CYP4A11Q02928 519 aa16.08■□□□□ 0.17
CBWD3-217ENST00000621474 PTPAQ15257 358 aa16.08■□□□□ 0.17
CBWD3-217ENST00000621474 SF3A1Q15459 793 aaKnown RBP16.08■□□□□ 0.17
CBWD3-217ENST00000621474 FOXD4L5Q5VV16 416 aaPredicted RBP16.08■□□□□ 0.17
CBWD3-217ENST00000621474 FOXD4L4Q8WXT5 416 aaPredicted RBP16.08■□□□□ 0.17
CBWD3-217ENST00000621474 ATP6V0A1Q93050 837 aa16.08■□□□□ 0.17
CBWD3-217ENST00000621474 DYDC2Q96IM9 177 aa16.08■□□□□ 0.17
CBWD3-217ENST00000621474 CEP89Q96ST8 783 aa16.08■□□□□ 0.17
CBWD3-217ENST00000621474 EIF2AK1Q9BQI3 630 aaKnown RBP16.08■□□□□ 0.17
CBWD3-217ENST00000621474 LXNQ9BS40 222 aa16.08■□□□□ 0.17
CBWD3-217ENST00000621474 PPP1R12CQ9BZL4 782 aa16.08■□□□□ 0.17
CBWD3-217ENST00000621474 WNT8AQ9H1J5 351 aa16.08■□□□□ 0.17
CBWD3-217ENST00000621474 HIPK3Q9H422 1215 aa16.08■□□□□ 0.17
CBWD3-217ENST00000621474 CLIC4Q9Y696 253 aa16.08■□□□□ 0.17
CBWD3-217ENST00000621474 TCHHQ07283 1943 aa16.08■□□□□ 0.17
CBWD3-217ENST00000621474 LOXHD1Q8IVV2 1947 aa16.08■□□□□ 0.16
CBWD3-217ENST00000621474 BRD1O95696 1058 aa16.08■□□□□ 0.16
CBWD3-217ENST00000621474 TIMP1P01033 207 aa16.08■□□□□ 0.16
CBWD3-217ENST00000621474 OATP04181 439 aa16.08■□□□□ 0.16
CBWD3-217ENST00000621474 P4HBP07237 508 aaKnown RBP16.08■□□□□ 0.16
CBWD3-217ENST00000621474 SPATA31C1P0DKV0 1188 aa16.08■□□□□ 0.16
CBWD3-217ENST00000621474 PSMC5P62195 406 aa16.08■□□□□ 0.16
CBWD3-217ENST00000621474 RBL2Q08999 1139 aa16.08■□□□□ 0.16
CBWD3-217ENST00000621474 ANO5Q75V66 913 aa16.08■□□□□ 0.16
CBWD3-217ENST00000621474 USP28Q96RU2 1077 aa16.08■□□□□ 0.16
CBWD3-217ENST00000621474 TUBE1Q9UJT0 475 aa16.08■□□□□ 0.16
CBWD3-217ENST00000621474 CYP2C18P33260 490 aa16.07■□□□□ 0.16
CBWD3-217ENST00000621474 QARSP47897 775 aaKnown RBP16.07■□□□□ 0.16
CBWD3-217ENST00000621474 IGBP1P78318 339 aa16.07■□□□□ 0.16
CBWD3-217ENST00000621474 PTK7Q13308 1070 aa16.07■□□□□ 0.16
CBWD3-217ENST00000621474 CTTNQ14247 550 aaKnown RBP16.07■□□□□ 0.16
CBWD3-217ENST00000621474 TRAF7Q6Q0C0 670 aa16.07■□□□□ 0.16
CBWD3-217ENST00000621474 RUFY4Q6ZNE9 571 aa16.07■□□□□ 0.16
CBWD3-217ENST00000621474 CKAP2LQ8IYA6 745 aa16.07■□□□□ 0.16
CBWD3-217ENST00000621474 BADQ92934 168 aa16.07■□□□□ 0.16
CBWD3-217ENST00000621474 VWCEQ96DN2 955 aa16.07■□□□□ 0.16
CBWD3-217ENST00000621474 SH2D3AQ9BRG2 576 aa16.07■□□□□ 0.16
CBWD3-217ENST00000621474 NOD1Q9Y239 953 aa16.07■□□□□ 0.16
CBWD3-217ENST00000621474 COL1A2P08123 1366 aa16.06■□□□□ 0.16
CBWD3-217ENST00000621474 PITPNM1O00562 1244 aa16.06■□□□□ 0.16
CBWD3-217ENST00000621474 ZBTB39O15060 712 aa16.06■□□□□ 0.16
CBWD3-217ENST00000621474 MED24O75448 989 aa16.06■□□□□ 0.16
CBWD3-217ENST00000621474 RAG1P15918 1043 aa16.06■□□□□ 0.16
CBWD3-217ENST00000621474 MAGEA10P43363 369 aaPredicted RBP16.06■□□□□ 0.16
CBWD3-217ENST00000621474 MDM2Q00987 491 aaPredicted RBP16.06■□□□□ 0.16
CBWD3-217ENST00000621474 GRIN1Q05586 938 aa16.06■□□□□ 0.16
CBWD3-217ENST00000621474 TARBP2Q15633 366 aaKnown RBP16.06■□□□□ 0.16
CBWD3-217ENST00000621474 ARL6IP4Q66PJ3 421 aaKnown RBP16.06■□□□□ 0.16
CBWD3-217ENST00000621474 CATSPER3Q86XQ3 398 aa16.06■□□□□ 0.16
CBWD3-217ENST00000621474 C4orf19Q8IY42 314 aa16.06■□□□□ 0.16
CBWD3-217ENST00000621474 FAM167AQ96KS9 214 aa16.06■□□□□ 0.16
CBWD3-217ENST00000621474 GDF15Q99988 308 aa16.06■□□□□ 0.16
CBWD3-217ENST00000621474 PRKAG2Q9UGJ0 569 aa16.06■□□□□ 0.16
CBWD3-217ENST00000621474 RRN3P2A6NIE6 340 aa16.05■□□□□ 0.16
CBWD3-217ENST00000621474 PP2D1A8MPX8 630 aa16.05■□□□□ 0.16
CBWD3-217ENST00000621474 C22orf31O95567 290 aa16.05■□□□□ 0.16
CBWD3-217ENST00000621474 GNAT1P11488 350 aa16.05■□□□□ 0.16
CBWD3-217ENST00000621474 CDC25AP30304 524 aa16.05■□□□□ 0.16
CBWD3-217ENST00000621474 PDIA5Q14554 519 aa16.05■□□□□ 0.16
CBWD3-217ENST00000621474 GPNMBQ14956 572 aa16.05■□□□□ 0.16
CBWD3-217ENST00000621474 ECM1Q16610 540 aa16.05■□□□□ 0.16
CBWD3-217ENST00000621474 XKR3Q5GH77 459 aa16.05■□□□□ 0.16
CBWD3-217ENST00000621474 MTHFD1LQ6UB35 978 aa16.05■□□□□ 0.16
CBWD3-217ENST00000621474 CAGE1Q8TC20 777 aa16.05■□□□□ 0.16
CBWD3-217ENST00000621474 MMTAG2Q9BU76 263 aaKnown RBP16.05■□□□□ 0.16
CBWD3-217ENST00000621474 NIFKQ9BYG3 293 aaKnown RBP16.05■□□□□ 0.16
CBWD3-217ENST00000621474 PRO3102Q9H379 93 aa16.05■□□□□ 0.16
CBWD3-217ENST00000621474 LYPLA2O95372 231 aa16.05■□□□□ 0.16
CBWD3-217ENST00000621474 CKBP12277 381 aa16.05■□□□□ 0.16
CBWD3-217ENST00000621474 CCL23P55773 120 aa16.05■□□□□ 0.16
CBWD3-217ENST00000621474 TMEM266Q2M3C6 531 aa16.05■□□□□ 0.16
CBWD3-217ENST00000621474 ZNF484Q5JVG2 852 aa16.05■□□□□ 0.16
CBWD3-217ENST00000621474 PLA2G4FQ68DD2 849 aa16.05■□□□□ 0.16
CBWD3-217ENST00000621474 MFSD5Q6N075 450 aa16.05■□□□□ 0.16
CBWD3-217ENST00000621474 DTHD1Q6ZMT9 781 aa16.05■□□□□ 0.16
CBWD3-217ENST00000621474 TPH2Q8IWU9 490 aa16.05■□□□□ 0.16
CBWD3-217ENST00000621474 LINC01465Q8N7H1 131 aa16.05■□□□□ 0.16
CBWD3-217ENST00000621474 ZNF579Q8NAF0 562 aaKnown RBP16.05■□□□□ 0.16
CBWD3-217ENST00000621474 NEK9Q8TD19 979 aa16.05■□□□□ 0.16
CBWD3-217ENST00000621474 SCLYQ96I15 445 aa16.05■□□□□ 0.16
CBWD3-217ENST00000621474 ZSWIM4Q9H7M6 989 aa16.05■□□□□ 0.16
CBWD3-217ENST00000621474 SZT2Q5T011 3432 aa16.04■□□□□ 0.16
CBWD3-217ENST00000621474 VWA3AA6NCI4 1184 aa16.04■□□□□ 0.16
CBWD3-217ENST00000621474 IQCF3P0C7M6 154 aa16.04■□□□□ 0.16
CBWD3-217ENST00000621474 CSF2RAP15509 400 aa16.04■□□□□ 0.16
CBWD3-217ENST00000621474 KLRC1P26715 233 aa16.04■□□□□ 0.16
CBWD3-217ENST00000621474 RPA1P27694 616 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms