RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 ZNF653Q96CK0 615 aa10.63□□□□□ -0.71
COL4A6-210ENST00000621266 SPATA17Q96L03 361 aa10.63□□□□□ -0.71
COL4A6-210ENST00000621266 ATP7BP35670 1465 aa10.63□□□□□ -0.71
COL4A6-210ENST00000621266 MYO1FO00160 1098 aa10.63□□□□□ -0.71
COL4A6-210ENST00000621266 BCAMP50895 628 aa10.63□□□□□ -0.71
COL4A6-210ENST00000621266 ARHGEF6Q15052 776 aa10.63□□□□□ -0.71
COL4A6-210ENST00000621266 CSRNP1Q96S65 589 aa10.63□□□□□ -0.71
COL4A6-210ENST00000621266 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.63□□□□□ -0.71
COL4A6-210ENST00000621266 NT5C3AQ9H0P0 336 aa10.63□□□□□ -0.71
COL4A6-210ENST00000621266 PFDN6O15212 129 aa10.62□□□□□ -0.71
COL4A6-210ENST00000621266 HAUS5O94927 633 aa10.62□□□□□ -0.71
COL4A6-210ENST00000621266 ABL1P00519 1130 aa10.62□□□□□ -0.71
COL4A6-210ENST00000621266 SLC1A4P43007 532 aa10.62□□□□□ -0.71
COL4A6-210ENST00000621266 IGBP1P78318 339 aa10.62□□□□□ -0.71
COL4A6-210ENST00000621266 MYL7Q01449 175 aa10.62□□□□□ -0.71
COL4A6-210ENST00000621266 ARHGEF25Q86VW2 580 aa10.62□□□□□ -0.71
COL4A6-210ENST00000621266 GJD4Q96KN9 370 aaPredicted RBP10.62□□□□□ -0.71
COL4A6-210ENST00000621266 LRRC37BQ96QE4 947 aa10.62□□□□□ -0.71
COL4A6-210ENST00000621266 LZTS2Q9BRK4 669 aa10.62□□□□□ -0.71
COL4A6-210ENST00000621266 KRT1P04264 644 aa10.62□□□□□ -0.71
COL4A6-210ENST00000621266 SLC44A4Q53GD3 710 aa10.62□□□□□ -0.71
COL4A6-210ENST00000621266 ADCK1Q86TW2 530 aa10.62□□□□□ -0.71
COL4A6-210ENST00000621266 CCDC127Q96BQ5 260 aa10.62□□□□□ -0.71
COL4A6-210ENST00000621266 PALD1Q9ULE6 856 aa10.62□□□□□ -0.71
COL4A6-210ENST00000621266 ARHGAP26Q9UNA1 814 aa10.62□□□□□ -0.71
COL4A6-210ENST00000621266 KDM3AQ9Y4C1 1321 aa10.62□□□□□ -0.71
COL4A6-210ENST00000621266 DCAF15Q66K64 600 aa10.62□□□□□ -0.71
COL4A6-210ENST00000621266 PDZD4Q76G19 769 aaPredicted RBP10.62□□□□□ -0.71
COL4A6-210ENST00000621266 GCFC2P16383 781 aaKnown RBP10.62□□□□□ -0.71
COL4A6-210ENST00000621266 LRRC14Q15048 493 aa10.62□□□□□ -0.71
COL4A6-210ENST00000621266 LRRC36Q1X8D7 754 aa10.62□□□□□ -0.71
COL4A6-210ENST00000621266 DARS2Q6PI48 645 aaKnown RBP10.62□□□□□ -0.71
COL4A6-210ENST00000621266 TOGARAM2Q6ZUX3 1019 aa10.62□□□□□ -0.71
COL4A6-210ENST00000621266 EPM2AIP1Q7L775 607 aaPredicted RBP10.62□□□□□ -0.71
COL4A6-210ENST00000621266 LONP2Q86WA8 852 aa10.62□□□□□ -0.71
COL4A6-210ENST00000621266 DNAAF3Q8N9W5 541 aa10.62□□□□□ -0.71
COL4A6-210ENST00000621266 DTX3LQ8TDB6 740 aa10.62□□□□□ -0.71
COL4A6-210ENST00000621266 TBC1D23Q9NUY8 699 aa10.62□□□□□ -0.71
COL4A6-210ENST00000621266 KIF17Q9P2E2 1029 aa10.62□□□□□ -0.71
COL4A6-210ENST00000621266 APOBEC2Q9Y235 224 aaKnown RBP10.62□□□□□ -0.71
COL4A6-210ENST00000621266 L3MBTL1Q9Y468 752 aa10.62□□□□□ -0.71
COL4A6-210ENST00000621266 PI4K2BG5E9Z4 385 aa10.62□□□□□ -0.71
COL4A6-210ENST00000621266 FMNL1O95466 1100 aaPredicted RBP10.62□□□□□ -0.71
COL4A6-210ENST00000621266 ALAS1P13196 640 aa10.62□□□□□ -0.71
COL4A6-210ENST00000621266 PIK3CAP42336 1068 aa10.62□□□□□ -0.71
COL4A6-210ENST00000621266 BBS9Q3SYG4 887 aa10.62□□□□□ -0.71
COL4A6-210ENST00000621266 RASSF3Q86WH2 238 aa10.62□□□□□ -0.71
COL4A6-210ENST00000621266 GRAMD1CQ8IYS0 662 aa10.62□□□□□ -0.71
COL4A6-210ENST00000621266 STAMBPL1Q96FJ0 436 aa10.62□□□□□ -0.71
COL4A6-210ENST00000621266 SH3GL1Q99961 368 aa10.62□□□□□ -0.71
COL4A6-210ENST00000621266 ADA2Q9NZK5 511 aa10.62□□□□□ -0.71
COL4A6-210ENST00000621266 IQANK1A0A1B0GTG1 560 aa10.61□□□□□ -0.71
COL4A6-210ENST00000621266 SMCO2A6NFE2 343 aa10.61□□□□□ -0.71
COL4A6-210ENST00000621266 KCNA3P22001 575 aa10.61□□□□□ -0.71
COL4A6-210ENST00000621266 MAP4P27816 1152 aaKnown RBP10.61□□□□□ -0.71
COL4A6-210ENST00000621266 KCNA1Q09470 495 aa10.61□□□□□ -0.71
COL4A6-210ENST00000621266 KRT31Q15323 416 aa10.61□□□□□ -0.71
COL4A6-210ENST00000621266 C2orf69Q8N8R5 385 aa10.61□□□□□ -0.71
COL4A6-210ENST00000621266 GFM2Q969S9 779 aaKnown RBP10.61□□□□□ -0.71
COL4A6-210ENST00000621266 ZBTB10Q96DT7 871 aa10.61□□□□□ -0.71
COL4A6-210ENST00000621266 NAF1Q96HR8 494 aaKnown RBP10.61□□□□□ -0.71
COL4A6-210ENST00000621266 FTOQ9C0B1 505 aaKnown RBP eCLIP10.61□□□□□ -0.71
COL4A6-210ENST00000621266 MLXIPQ9HAP2 919 aa10.61□□□□□ -0.71
COL4A6-210ENST00000621266 ZNF277Q9NRM2 450 aaPredicted RBP10.61□□□□□ -0.71
COL4A6-210ENST00000621266 ARPP21Q9UBL0 812 aaPredicted RBP10.61□□□□□ -0.71
COL4A6-210ENST00000621266 SPATA31E1Q6ZUB1 1445 aa10.61□□□□□ -0.71
COL4A6-210ENST00000621266 ERVK-7P63135 1459 aa10.61□□□□□ -0.71
COL4A6-210ENST00000621266 SERPINB3P29508 390 aa10.61□□□□□ -0.71
COL4A6-210ENST00000621266 EIF4A3P38919 411 aaKnown RBP10.61□□□□□ -0.71
COL4A6-210ENST00000621266 TTLL6Q8N841 843 aa10.61□□□□□ -0.71
COL4A6-210ENST00000621266 PCDHA5Q9Y5H7 936 aa10.61□□□□□ -0.71
COL4A6-210ENST00000621266 MORC2Q9Y6X9 1032 aaPredicted RBP10.61□□□□□ -0.71
COL4A6-210ENST00000621266 TESPA1A2RU30 521 aaPredicted RBP10.61□□□□□ -0.71
COL4A6-210ENST00000621266 N4BP1O75113 896 aaKnown RBP10.61□□□□□ -0.71
COL4A6-210ENST00000621266 DEAF1O75398 565 aaPredicted RBP10.61□□□□□ -0.71
COL4A6-210ENST00000621266 PTH1RQ03431 593 aa10.61□□□□□ -0.71
COL4A6-210ENST00000621266 EMBQ6PCB8 327 aa10.61□□□□□ -0.71
COL4A6-210ENST00000621266 SLC10A4Q96EP9 437 aa10.61□□□□□ -0.71
COL4A6-210ENST00000621266 RASA4BC9J798 803 aa10.61□□□□□ -0.71
COL4A6-210ENST00000621266 RASA4O43374 803 aa10.61□□□□□ -0.71
COL4A6-210ENST00000621266 WDR47O94967 919 aa10.61□□□□□ -0.71
COL4A6-210ENST00000621266 BTDP43251 543 aa10.61□□□□□ -0.71
COL4A6-210ENST00000621266 PPP2R2AP63151 447 aa10.61□□□□□ -0.71
COL4A6-210ENST00000621266 CHRNDQ07001 517 aa10.61□□□□□ -0.71
COL4A6-210ENST00000621266 CUL1Q13616 776 aa10.61□□□□□ -0.71
COL4A6-210ENST00000621266 CAPRIN1Q14444 709 aaKnown RBP10.61□□□□□ -0.71
COL4A6-210ENST00000621266 TBC1D10BQ4KMP7 808 aaPredicted RBP10.61□□□□□ -0.71
COL4A6-210ENST00000621266 TGS1Q96RS0 853 aaKnown RBP10.61□□□□□ -0.71
COL4A6-210ENST00000621266 IGSF1Q8N6C5 1336 aa10.61□□□□□ -0.71
COL4A6-210ENST00000621266 CFAP73A6NFT4 308 aa10.61□□□□□ -0.71
COL4A6-210ENST00000621266 ADCY3O60266 1144 aa10.61□□□□□ -0.71
COL4A6-210ENST00000621266 LRRN2O75325 713 aa10.61□□□□□ -0.71
COL4A6-210ENST00000621266 CYP27A1Q02318 531 aa10.61□□□□□ -0.71
COL4A6-210ENST00000621266 ACBD5Q5T8D3 534 aaPredicted RBP10.61□□□□□ -0.71
COL4A6-210ENST00000621266 REXO1Q8N1G1 1221 aaKnown RBP10.61□□□□□ -0.71
COL4A6-210ENST00000621266 PYROXD1Q8WU10 500 aa10.61□□□□□ -0.71
COL4A6-210ENST00000621266 KLC2Q9H0B6 622 aa10.61□□□□□ -0.71
COL4A6-210ENST00000621266 SAMSN1Q9NSI8 373 aaKnown RBP10.61□□□□□ -0.71
COL4A6-210ENST00000621266 MAP3K15Q6ZN16 1313 aa10.61□□□□□ -0.71
COL4A6-210ENST00000621266 ADGRL3Q9HAR2 1447 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms