RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 PCP11498 1178 aaKnown RBP7.68□□□□□ -1.18
COLCA1-205ENST00000620864 HLA-DPA1P20036 260 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 SREBF2Q12772 1141 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 THOC5Q13769 683 aaKnown RBP7.68□□□□□ -1.18
COLCA1-205ENST00000620864 TRADDQ15628 312 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 TMED8Q6PL24 325 aaPredicted RBP7.68□□□□□ -1.18
COLCA1-205ENST00000620864 EXOC8Q8IYI6 725 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 PBXIP1Q96AQ6 731 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 PHF21AQ96BD5 680 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 MYO5CQ9NQX4 1742 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 TAF5LO75529 589 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 NCF2P19878 526 aaPredicted RBP7.68□□□□□ -1.18
COLCA1-205ENST00000620864 TBCCQ15814 346 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 ZNF555Q8NEP9 628 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 CXorf56Q9H5V9 222 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 COL4A3BPQ9Y5P4 624 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 SBNO1A3KN83 1393 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 PLEKHG1Q9ULL1 1385 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 COPB1P53618 953 aaKnown RBP7.68□□□□□ -1.18
COLCA1-205ENST00000620864 THOC1Q96FV9 657 aaKnown RBP7.68□□□□□ -1.18
COLCA1-205ENST00000620864 OLFM1Q99784 485 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 MED10Q9BTT4 135 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 SPTLC3Q9NUV7 552 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 PCDHB15Q9Y5E8 787 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 SBNO2Q9Y2G9 1366 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 SYNGAP1Q96PV0 1343 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 RNF103-CHMP3A0A140T963 221 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 H7C0C1 242 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 TNNI1P19237 187 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 ATP5OP48047 213 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 SOX10P56693 466 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 INPP5AQ14642 412 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 INAQ16352 499 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 KIAA1841Q6NSI8 718 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 TBC1D1Q86TI0 1168 aaPredicted RBP7.68□□□□□ -1.18
COLCA1-205ENST00000620864 ARHGEF25Q86VW2 580 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 DDI1Q8WTU0 396 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 MAML1Q92585 1016 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 AK8Q96MA6 479 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 RAD21L1Q9H4I0 556 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 KLHL31Q9H511 634 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 DBNDD1Q9H9R9 158 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.68□□□□□ -1.18
COLCA1-205ENST00000620864 ATP8A1Q9Y2Q0 1164 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 DISP1Q96F81 1524 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 LRRIQ3A6PVS8 624 aaPredicted RBP7.68□□□□□ -1.18
COLCA1-205ENST00000620864 RSPH10B2B2RC85 870 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 ERVV-2B6SEH9 535 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 RSPH10BP0C881 870 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 CCND1P24385 295 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.68□□□□□ -1.18
COLCA1-205ENST00000620864 NR5A1Q13285 461 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 NDUFA5Q16718 116 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 DPP9Q86TI2 863 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 PLD3Q8IV08 490 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 REXO1Q8N1G1 1221 aaKnown RBP7.68□□□□□ -1.18
COLCA1-205ENST00000620864 CCDC134Q9H6E4 229 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 RMI1Q9H9A7 625 aa7.68□□□□□ -1.18
COLCA1-205ENST00000620864 GEMIN8Q9NWZ8 242 aaKnown RBP7.68□□□□□ -1.18
COLCA1-205ENST00000620864 NLRP1Q9C000 1473 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 TOM1L1O75674 476 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 HAUS5O94927 633 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 DDIT3P35638 169 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 TRAPPC10P48553 1259 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 CLCN6P51797 869 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 CRYMQ14894 314 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 SUPT20HL1Q3ZLR7 823 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 DNAL1Q4LDG9 190 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 SYCP2LQ5T4T6 812 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 CIAPIN1Q6FI81 312 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 MAEAQ7L5Y9 396 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 KRT26Q7Z3Y9 468 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 SKAP1Q86WV1 359 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 TTC30BQ8N4P2 665 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 RSPH1Q8WYR4 309 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 CTIFO43310 598 aaKnown RBP7.67□□□□□ -1.18
COLCA1-205ENST00000620864 MED7O43513 233 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 XPOTO43592 962 aaKnown RBP7.67□□□□□ -1.18
COLCA1-205ENST00000620864 PUM3Q15397 648 aaKnown RBP7.67□□□□□ -1.18
COLCA1-205ENST00000620864 TRIM71Q2Q1W2 868 aaKnown RBP7.67□□□□□ -1.18
COLCA1-205ENST00000620864 ZNF697Q5TEC3 545 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 CMTR1Q8N1G2 835 aaKnown RBP7.67□□□□□ -1.18
COLCA1-205ENST00000620864 LRRN4CLQ8ND94 238 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 FAM210AQ96ND0 272 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 ATP8A2Q9NTI2 1148 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 AP4S1Q9Y587 144 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 POLR3AO14802 1390 aaPredicted RBP7.67□□□□□ -1.18
COLCA1-205ENST00000620864 GRID2IPA4D2P6 1211 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 EIF2S1P05198 315 aaKnown RBP7.67□□□□□ -1.18
COLCA1-205ENST00000620864 NT5C2P49902 561 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 DR1Q01658 176 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 TXNRD1Q16881 649 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 AGGF1Q8N302 714 aaeCLIP7.67□□□□□ -1.18
COLCA1-205ENST00000620864 SKA2Q8WVK7 121 aaPredicted RBP7.67□□□□□ -1.18
COLCA1-205ENST00000620864 APPBP2Q92624 585 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 EPAS1Q99814 870 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 DSCC1Q9BVC3 393 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 EPS8L2Q9H6S3 715 aa7.67□□□□□ -1.18
COLCA1-205ENST00000620864 COL17A1Q9UMD9 1497 aaPredicted RBP7.67□□□□□ -1.18
COLCA1-205ENST00000620864 HSPA4LO95757 839 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms