RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 SEC14L1Q92503 715 aa21.38■■□□□ 1.01
PDLIM3-212ENST00000620787 BCCIPQ9P287 314 aaKnown RBP eCLIP21.38■■□□□ 1.01
PDLIM3-212ENST00000620787 SRP68Q9UHB9 627 aaKnown RBP21.38■■□□□ 1.01
PDLIM3-212ENST00000620787 AMACRQ9UHK6 382 aa21.38■■□□□ 1.01
PDLIM3-212ENST00000620787 ATP8B3O60423 1300 aa21.38■■□□□ 1.01
PDLIM3-212ENST00000620787 POTEB3A0JP26 581 aa21.38■■□□□ 1.01
PDLIM3-212ENST00000620787 POTECB2RU33 542 aa21.38■■□□□ 1.01
PDLIM3-212ENST00000620787 CHUKO15111 745 aa21.38■■□□□ 1.01
PDLIM3-212ENST00000620787 BYSLQ13895 437 aaKnown RBP21.38■■□□□ 1.01
PDLIM3-212ENST00000620787 POTEBQ6S5H4 581 aa21.38■■□□□ 1.01
PDLIM3-212ENST00000620787 LRRC47Q8N1G4 583 aaKnown RBP21.38■■□□□ 1.01
PDLIM3-212ENST00000620787 ZKSCAN4Q969J2 545 aaPredicted RBP21.38■■□□□ 1.01
PDLIM3-212ENST00000620787 SLITRK6Q9H5Y7 841 aa21.38■■□□□ 1.01
PDLIM3-212ENST00000620787 NOVA2Q9UNW9 492 aaKnown RBP21.38■■□□□ 1.01
PDLIM3-212ENST00000620787 PLIN4Q96Q06 1357 aa21.38■■□□□ 1.01
PDLIM3-212ENST00000620787 DCDC2CA8MYV0 355 aa21.37■■□□□ 1.01
PDLIM3-212ENST00000620787 MARCH6O60337 910 aa21.37■■□□□ 1.01
PDLIM3-212ENST00000620787 SNHG28P0DPA3 235 aa21.37■■□□□ 1.01
PDLIM3-212ENST00000620787 PON1P27169 355 aa21.37■■□□□ 1.01
PDLIM3-212ENST00000620787 PEX26Q7Z412 305 aa21.37■■□□□ 1.01
PDLIM3-212ENST00000620787 RAPGEF5Q92565 580 aa21.37■■□□□ 1.01
PDLIM3-212ENST00000620787 GPR101Q96P66 508 aaPredicted RBP21.37■■□□□ 1.01
PDLIM3-212ENST00000620787 JMJD4Q9H9V9 463 aa21.37■■□□□ 1.01
PDLIM3-212ENST00000620787 GPCPD1Q9NPB8 672 aa21.37■■□□□ 1.01
PDLIM3-212ENST00000620787 MTMR4Q9NYA4 1195 aa21.37■■□□□ 1.01
PDLIM3-212ENST00000620787 SUCLA2Q9P2R7 463 aaPredicted RBP21.37■■□□□ 1.01
PDLIM3-212ENST00000620787 NRAPQ86VF7 1730 aa21.37■■□□□ 1.01
PDLIM3-212ENST00000620787 TMCO5BA8MYB1 307 aa21.37■■□□□ 1.01
PDLIM3-212ENST00000620787 CASP5P51878 434 aa21.37■■□□□ 1.01
PDLIM3-212ENST00000620787 ARSHQ5FYA8 562 aa21.37■■□□□ 1.01
PDLIM3-212ENST00000620787 FRMD5Q7Z6J6 570 aa21.37■■□□□ 1.01
PDLIM3-212ENST00000620787 SEC16BQ96JE7 1060 aa21.37■■□□□ 1.01
PDLIM3-212ENST00000620787 LRRC4CQ9HCJ2 640 aa21.37■■□□□ 1.01
PDLIM3-212ENST00000620787 AJAP1Q9UKB5 411 aaPredicted RBP21.37■■□□□ 1.01
PDLIM3-212ENST00000620787 LEMD3Q9Y2U8 911 aa21.37■■□□□ 1.01
PDLIM3-212ENST00000620787 PNMA6FA0A0J9YX94 578 aa21.36■■□□□ 1.01
PDLIM3-212ENST00000620787 DNM1LO00429 736 aa21.36■■□□□ 1.01
PDLIM3-212ENST00000620787 TTI1O43156 1089 aa21.36■■□□□ 1.01
PDLIM3-212ENST00000620787 AFPP02771 609 aaKnown RBP21.36■■□□□ 1.01
PDLIM3-212ENST00000620787 GCFC2P16383 781 aaKnown RBP21.36■■□□□ 1.01
PDLIM3-212ENST00000620787 RHBDL3P58872 404 aa21.36■■□□□ 1.01
PDLIM3-212ENST00000620787 ODF2Q5BJF6 829 aa21.36■■□□□ 1.01
PDLIM3-212ENST00000620787 ZNF804AQ7Z570 1209 aa21.36■■□□□ 1.01
PDLIM3-212ENST00000620787 UIMC1Q96RL1 719 aa21.36■■□□□ 1.01
PDLIM3-212ENST00000620787 CXorf56Q9H5V9 222 aa21.36■■□□□ 1.01
PDLIM3-212ENST00000620787 F8VZ95 297 aa21.36■■□□□ 1.01
PDLIM3-212ENST00000620787 FLOT1O75955 427 aa21.36■■□□□ 1.01
PDLIM3-212ENST00000620787 EXOC3L4Q17RC7 722 aa21.36■■□□□ 1.01
PDLIM3-212ENST00000620787 ANKRD20A8PQ5CZ79 823 aa21.36■■□□□ 1.01
PDLIM3-212ENST00000620787 NT5DC3Q86UY8 548 aa21.36■■□□□ 1.01
PDLIM3-212ENST00000620787 CCDC114Q96M63 670 aa21.36■■□□□ 1.01
PDLIM3-212ENST00000620787 ARMCX3Q9UH62 379 aaPredicted RBP21.36■■□□□ 1.01
PDLIM3-212ENST00000620787 NARFQ9UHQ1 456 aa21.36■■□□□ 1.01
PDLIM3-212ENST00000620787 A0A0A6YYK5 440 aaPredicted RBP21.35■■□□□ 1.01
PDLIM3-212ENST00000620787 BACH1O14867 736 aa21.35■■□□□ 1.01
PDLIM3-212ENST00000620787 MAGOHP61326 146 aaKnown RBP21.35■■□□□ 1.01
PDLIM3-212ENST00000620787 ADGRF4Q8IZF3 695 aa21.35■■□□□ 1.01
PDLIM3-212ENST00000620787 CUL5Q93034 780 aa21.35■■□□□ 1.01
PDLIM3-212ENST00000620787 TATDN2Q93075 761 aa21.35■■□□□ 1.01
PDLIM3-212ENST00000620787 MAGOHBQ96A72 148 aaKnown RBP21.35■■□□□ 1.01
PDLIM3-212ENST00000620787 CELF4Q9BZC1 486 aaKnown RBP21.35■■□□□ 1.01
PDLIM3-212ENST00000620787 SIX2Q9NPC8 291 aa21.35■■□□□ 1.01
PDLIM3-212ENST00000620787 PITPNM2Q9BZ72 1349 aa21.35■■□□□ 1.01
PDLIM3-212ENST00000620787 CNTNAP4Q9C0A0 1308 aa21.35■■□□□ 1.01
PDLIM3-212ENST00000620787 ANXA13P27216 316 aa21.34■■□□□ 1.01
PDLIM3-212ENST00000620787 SLC12A3P55017 1021 aa21.34■■□□□ 1.01
PDLIM3-212ENST00000620787 JAM2P57087 298 aa21.34■■□□□ 1.01
PDLIM3-212ENST00000620787 EPHA7Q15375 998 aa21.34■■□□□ 1.01
PDLIM3-212ENST00000620787 TRAF3IP3Q9Y228 551 aa21.34■■□□□ 1.01
PDLIM3-212ENST00000620787 THRAP3Q9Y2W1 955 aaKnown RBP21.34■■□□□ 1.01
PDLIM3-212ENST00000620787 H2AFZP0C0S5 128 aa21.34■■□□□ 1.01
PDLIM3-212ENST00000620787 HOXD13P35453 343 aa21.34■■□□□ 1.01
PDLIM3-212ENST00000620787 POU5F1Q01860 360 aaKnown RBP21.34■■□□□ 1.01
PDLIM3-212ENST00000620787 DHX9Q08211 1270 aaKnown RBP21.34■■□□□ 1.01
PDLIM3-212ENST00000620787 NFIXQ14938 502 aa21.34■■□□□ 1.01
PDLIM3-212ENST00000620787 TPTE2Q6XPS3 522 aa21.34■■□□□ 1.01
PDLIM3-212ENST00000620787 H2AFVQ71UI9 128 aa21.34■■□□□ 1.01
PDLIM3-212ENST00000620787 CLEC10AQ8IUN9 316 aa21.34■■□□□ 1.01
PDLIM3-212ENST00000620787 CCDC26Q8TAB7 109 aa21.34■■□□□ 1.01
PDLIM3-212ENST00000620787 LMBR1Q8WVP7 490 aa21.34■■□□□ 1.01
PDLIM3-212ENST00000620787 HES6Q96HZ4 224 aa21.34■■□□□ 1.01
PDLIM3-212ENST00000620787 ZHX3Q9H4I2 956 aa21.34■■□□□ 1.01
PDLIM3-212ENST00000620787 GOLGA6L7A0A1B0GV03 622 aa21.33■■□□□ 1.01
PDLIM3-212ENST00000620787 MED24O75448 989 aa21.33■■□□□ 1.01
PDLIM3-212ENST00000620787 KRT18P05783 430 aaKnown RBP21.33■■□□□ 1.01
PDLIM3-212ENST00000620787 PLCG2P16885 1265 aa21.33■■□□□ 1.01
PDLIM3-212ENST00000620787 KRT71Q3SY84 523 aa21.33■■□□□ 1.01
PDLIM3-212ENST00000620787 CACNA2D3Q8IZS8 1091 aa21.33■■□□□ 1.01
PDLIM3-212ENST00000620787 DHX36Q9H2U1 1008 aaKnown RBP21.33■■□□□ 1.01
PDLIM3-212ENST00000620787 FAM114A2Q9NRY5 505 aa21.33■■□□□ 1.01
PDLIM3-212ENST00000620787 DDX3XO00571 662 aaKnown RBP eCLIP21.33■■□□□ 1
PDLIM3-212ENST00000620787 EIF6P56537 245 aaKnown RBP21.33■■□□□ 1
PDLIM3-212ENST00000620787 ZNF543Q08ER8 600 aa21.33■■□□□ 1
PDLIM3-212ENST00000620787 DAAM2Q86T65 1068 aa21.33■■□□□ 1
PDLIM3-212ENST00000620787 TLCD1Q96CP7 247 aa21.33■■□□□ 1
PDLIM3-212ENST00000620787 TXLNGYQ9BZA5 131 aa21.33■■□□□ 1
PDLIM3-212ENST00000620787 DPH5Q9H2P9 285 aa21.33■■□□□ 1
PDLIM3-212ENST00000620787 INTUQ9ULD6 942 aa21.33■■□□□ 1
PDLIM3-212ENST00000620787 ATF5Q9Y2D1 282 aaPredicted RBP21.33■■□□□ 1
PDLIM3-212ENST00000620787 IGKV6D-41A0A0C4DH26 115 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms