RNA–Protein interactions for RNA: ENST00000619887.4

CDH23-213, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,224 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-213ENST00000619887 Q4G0T1 1027 aa10.84□□□□□ -0.67
CDH23-213ENST00000619887 CEP55Q53EZ4 464 aa10.84□□□□□ -0.67
CDH23-213ENST00000619887 DAAM2Q86T65 1068 aa10.84□□□□□ -0.67
CDH23-213ENST00000619887 SYT2Q8N9I0 419 aaPredicted RBP10.84□□□□□ -0.67
CDH23-213ENST00000619887 MSANTD4Q8NCY6 345 aa10.84□□□□□ -0.67
CDH23-213ENST00000619887 SHISA4Q96DD7 197 aa10.84□□□□□ -0.67
CDH23-213ENST00000619887 DYDC2Q96IM9 177 aa10.84□□□□□ -0.67
CDH23-213ENST00000619887 MLXIPQ9HAP2 919 aa10.84□□□□□ -0.67
CDH23-213ENST00000619887 KCND2Q9NZV8 630 aa10.84□□□□□ -0.67
CDH23-213ENST00000619887 ATF5Q9Y2D1 282 aaPredicted RBP10.84□□□□□ -0.67
CDH23-213ENST00000619887 DAAM1Q9Y4D1 1078 aa10.84□□□□□ -0.67
CDH23-213ENST00000619887 GOLGA8KD6RF30 607 aa10.84□□□□□ -0.67
CDH23-213ENST00000619887 PLSCR1O15162 318 aa10.84□□□□□ -0.67
CDH23-213ENST00000619887 CIAPIN1Q6FI81 312 aa10.84□□□□□ -0.67
CDH23-213ENST00000619887 ALKBH5Q6P6C2 394 aaKnown RBP10.84□□□□□ -0.67
CDH23-213ENST00000619887 RSBN1LQ6PCB5 846 aaPredicted RBP10.84□□□□□ -0.67
CDH23-213ENST00000619887 KLHL7Q8IXQ5 586 aa10.84□□□□□ -0.67
CDH23-213ENST00000619887 PIGOQ8TEQ8 1089 aa10.84□□□□□ -0.67
CDH23-213ENST00000619887 OSBPL9Q96SU4 736 aa10.84□□□□□ -0.67
CDH23-213ENST00000619887 HDAC6Q9UBN7 1215 aa10.84□□□□□ -0.67
CDH23-213ENST00000619887 UBE4BO95155 1302 aa10.83□□□□□ -0.68
CDH23-213ENST00000619887 DDTLA6NHG4 134 aaPredicted RBP10.83□□□□□ -0.68
CDH23-213ENST00000619887 SRGAP2O75044 1071 aa10.83□□□□□ -0.68
CDH23-213ENST00000619887 KLK7P49862 253 aa10.83□□□□□ -0.68
CDH23-213ENST00000619887 RNASE9P60153 205 aaKnown RBP10.83□□□□□ -0.68
CDH23-213ENST00000619887 GFPT1Q06210 699 aaPredicted RBP10.83□□□□□ -0.68
CDH23-213ENST00000619887 XKR9Q5GH70 373 aa10.83□□□□□ -0.68
CDH23-213ENST00000619887 TRAPPC11Q7Z392 1133 aa10.83□□□□□ -0.68
CDH23-213ENST00000619887 RDH13Q8NBN7 331 aa10.83□□□□□ -0.68
CDH23-213ENST00000619887 REEP2Q9BRK0 252 aa10.83□□□□□ -0.68
CDH23-213ENST00000619887 IMPG2Q9BZV3 1241 aa10.83□□□□□ -0.68
CDH23-213ENST00000619887 CTTNBP2NLQ9P2B4 639 aa10.83□□□□□ -0.68
CDH23-213ENST00000619887 UTP11Q9Y3A2 253 aaKnown RBP10.83□□□□□ -0.68
CDH23-213ENST00000619887 DOCK2Q92608 1830 aa10.83□□□□□ -0.68
CDH23-213ENST00000619887 MTMR3Q13615 1198 aa10.83□□□□□ -0.68
CDH23-213ENST00000619887 GNPTABQ3T906 1256 aa10.83□□□□□ -0.68
CDH23-213ENST00000619887 DACT2Q5SW24 774 aa10.83□□□□□ -0.68
CDH23-213ENST00000619887 EMBQ6PCB8 327 aa10.83□□□□□ -0.68
CDH23-213ENST00000619887 VCPKMTQ9H867 229 aa10.83□□□□□ -0.68
CDH23-213ENST00000619887 TRIM10Q9UDY6 481 aa10.83□□□□□ -0.68
CDH23-213ENST00000619887 ODF2LQ9ULJ1 636 aa10.83□□□□□ -0.68
CDH23-213ENST00000619887 MYZAPP0CAP1 466 aa10.83□□□□□ -0.68
CDH23-213ENST00000619887 MUTP22033 750 aa10.83□□□□□ -0.68
CDH23-213ENST00000619887 WDR44Q5JSH3 913 aa10.83□□□□□ -0.68
CDH23-213ENST00000619887 CATSPER3Q86XQ3 398 aa10.83□□□□□ -0.68
CDH23-213ENST00000619887 MED15Q96RN5 788 aa10.83□□□□□ -0.68
CDH23-213ENST00000619887 FNBP1Q96RU3 617 aa10.83□□□□□ -0.68
CDH23-213ENST00000619887 ZNF341Q9BYN7 854 aa10.83□□□□□ -0.68
CDH23-213ENST00000619887 NPHP3-ACAD11A0A0J9YXS1 232 aa10.82□□□□□ -0.68
CDH23-213ENST00000619887 TESPA1A2RU30 521 aaPredicted RBP10.82□□□□□ -0.68
CDH23-213ENST00000619887 EIF3DO15371 548 aaKnown RBP eCLIP10.82□□□□□ -0.68
CDH23-213ENST00000619887 VSNL1P62760 191 aa10.82□□□□□ -0.68
CDH23-213ENST00000619887 SLC18A3Q16572 532 aa10.82□□□□□ -0.68
CDH23-213ENST00000619887 EAPPQ56P03 285 aaPredicted RBP10.82□□□□□ -0.68
CDH23-213ENST00000619887 PAPD7Q5XG87 772 aaKnown RBP10.82□□□□□ -0.68
CDH23-213ENST00000619887 ZNF662Q6ZS27 426 aa10.82□□□□□ -0.68
CDH23-213ENST00000619887 MIGA2Q7L4E1 593 aa10.82□□□□□ -0.68
CDH23-213ENST00000619887 SNED1Q8TER0 1413 aa10.82□□□□□ -0.68
CDH23-213ENST00000619887 MMTAG2Q9BU76 263 aaKnown RBP10.82□□□□□ -0.68
CDH23-213ENST00000619887 SYNCQ9H7C4 482 aa10.82□□□□□ -0.68
CDH23-213ENST00000619887 ZNF70Q9UC06 446 aaPredicted RBP10.82□□□□□ -0.68
CDH23-213ENST00000619887 MTRF1LQ9UGC7 380 aaKnown RBP10.82□□□□□ -0.68
CDH23-213ENST00000619887 GRID2IPA4D2P6 1211 aa10.82□□□□□ -0.68
CDH23-213ENST00000619887 TMEM110-MUSTN1A8MSY1 372 aa10.82□□□□□ -0.68
CDH23-213ENST00000619887 SORBS3O60504 671 aa10.82□□□□□ -0.68
CDH23-213ENST00000619887 FDX1P10109 184 aa10.82□□□□□ -0.68
CDH23-213ENST00000619887 RFX1P22670 979 aa10.82□□□□□ -0.68
CDH23-213ENST00000619887 HERVK_113P62684 666 aa10.82□□□□□ -0.68
CDH23-213ENST00000619887 DMP1Q13316 513 aaPredicted RBP10.82□□□□□ -0.68
CDH23-213ENST00000619887 FAM102BQ5T8I3 360 aa10.82□□□□□ -0.68
CDH23-213ENST00000619887 APTXQ7Z2E3 356 aaKnown RBP10.82□□□□□ -0.68
CDH23-213ENST00000619887 PRPF38AQ8NAV1 312 aaKnown RBP10.82□□□□□ -0.68
CDH23-213ENST00000619887 ATP6V0A1Q93050 837 aa10.82□□□□□ -0.68
CDH23-213ENST00000619887 RAB17Q9H0T7 212 aa10.82□□□□□ -0.68
CDH23-213ENST00000619887 TBC1D22BQ9NU19 505 aa10.82□□□□□ -0.68
CDH23-213ENST00000619887 STIM2Q9P246 746 aa10.82□□□□□ -0.68
CDH23-213ENST00000619887 MYO5AQ9Y4I1 1855 aaKnown RBP10.82□□□□□ -0.68
CDH23-213ENST00000619887 MYH13Q9UKX3 1938 aa10.82□□□□□ -0.68
CDH23-213ENST00000619887 IGKV6D-41A0A0C4DH26 115 aa10.82□□□□□ -0.68
CDH23-213ENST00000619887 PGRMC1O00264 195 aaKnown RBP10.82□□□□□ -0.68
CDH23-213ENST00000619887 IPO5O00410 1097 aaKnown RBP10.82□□□□□ -0.68
CDH23-213ENST00000619887 MED24O75448 989 aa10.82□□□□□ -0.68
CDH23-213ENST00000619887 FTCDO95954 541 aa10.82□□□□□ -0.68
CDH23-213ENST00000619887 ABCD1P33897 745 aa10.82□□□□□ -0.68
CDH23-213ENST00000619887 STRN3Q13033 797 aa10.82□□□□□ -0.68
CDH23-213ENST00000619887 INTS8Q75QN2 995 aaKnown RBP10.82□□□□□ -0.68
CDH23-213ENST00000619887 LDHDQ86WU2 507 aa10.82□□□□□ -0.68
CDH23-213ENST00000619887 IRF2BP1Q8IU81 584 aa10.82□□□□□ -0.68
CDH23-213ENST00000619887 VIPAS39Q9H9C1 493 aa10.82□□□□□ -0.68
CDH23-213ENST00000619887 KRIT1O00522 736 aa10.82□□□□□ -0.68
CDH23-213ENST00000619887 SPOPO43791 374 aa10.82□□□□□ -0.68
CDH23-213ENST00000619887 PALMO75781 387 aa10.82□□□□□ -0.68
CDH23-213ENST00000619887 GFPT2O94808 682 aa10.82□□□□□ -0.68
CDH23-213ENST00000619887 FECHP22830 423 aa10.82□□□□□ -0.68
CDH23-213ENST00000619887 CXCR5P32302 372 aa10.82□□□□□ -0.68
CDH23-213ENST00000619887 RUFY4Q6ZNE9 571 aa10.82□□□□□ -0.68
CDH23-213ENST00000619887 CDHR1Q96JP9 859 aa10.82□□□□□ -0.68
CDH23-213ENST00000619887 GDAP1L1Q96MZ0 367 aa10.82□□□□□ -0.68
CDH23-213ENST00000619887 MMS19Q96T76 1030 aa10.82□□□□□ -0.68
CDH23-213ENST00000619887 MKNK1Q9BUB5 465 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms