RNA–Protein interactions for RNA: ENST00000619178.1

SNORD3D-201, Transcript of small nucleolar RNA, C/D box 3D, humanhuman

BASIC

Gene SNORD3D, Length 218 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3D-201ENST00000619178 EYA4O95677 639 aa12.31□□□□□ -0.44
SNORD3D-201ENST00000619178 KRT18P05783 430 aaKnown RBP12.31□□□□□ -0.44
SNORD3D-201ENST00000619178 HOXD8P13378 290 aaPredicted RBP12.31□□□□□ -0.44
SNORD3D-201ENST00000619178 CDC25AP30304 524 aa12.31□□□□□ -0.44
SNORD3D-201ENST00000619178 YWHABP31946 246 aaKnown RBP12.31□□□□□ -0.44
SNORD3D-201ENST00000619178 NKX3-2P78367 333 aa12.31□□□□□ -0.44
SNORD3D-201ENST00000619178 GRB10Q13322 594 aa12.31□□□□□ -0.44
SNORD3D-201ENST00000619178 CTTNQ14247 550 aaKnown RBP12.31□□□□□ -0.44
SNORD3D-201ENST00000619178 TMEM119Q4V9L6 283 aa12.31□□□□□ -0.44
SNORD3D-201ENST00000619178 GNASQ5JWF2 1037 aa12.31□□□□□ -0.44
SNORD3D-201ENST00000619178 CCDC183Q5T5S1 534 aa12.31□□□□□ -0.44
SNORD3D-201ENST00000619178 POTEBQ6S5H4 581 aa12.31□□□□□ -0.44
SNORD3D-201ENST00000619178 ENGASEQ8NFI3 743 aa12.31□□□□□ -0.44
SNORD3D-201ENST00000619178 AFG1LQ8WV93 481 aa12.31□□□□□ -0.44
SNORD3D-201ENST00000619178 RAD54LQ92698 747 aa12.31□□□□□ -0.44
SNORD3D-201ENST00000619178 MMTAG2Q9BU76 263 aaKnown RBP12.31□□□□□ -0.44
SNORD3D-201ENST00000619178 SEZ6LQ9BYH1 1024 aa12.31□□□□□ -0.44
SNORD3D-201ENST00000619178 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.31□□□□□ -0.446e-21■■■■□ 25.5
SNORD3D-201ENST00000619178 POTEFA5A3E0 1075 aa12.3□□□□□ -0.44
SNORD3D-201ENST00000619178 KBTBD13C9JR72 458 aa12.3□□□□□ -0.44
SNORD3D-201ENST00000619178 H3BRB1 525 aa12.3□□□□□ -0.44
SNORD3D-201ENST00000619178 GAS2O43903 313 aaKnown RBP12.3□□□□□ -0.44
SNORD3D-201ENST00000619178 HBP1O60381 514 aa12.3□□□□□ -0.44
SNORD3D-201ENST00000619178 SORBS3O60504 671 aa12.3□□□□□ -0.44
SNORD3D-201ENST00000619178 NR1I2O75469 434 aa12.3□□□□□ -0.44
SNORD3D-201ENST00000619178 OATP04181 439 aa12.3□□□□□ -0.44
SNORD3D-201ENST00000619178 LGALS2P05162 132 aa12.3□□□□□ -0.44
SNORD3D-201ENST00000619178 SPATA31C1P0DKV0 1188 aa12.3□□□□□ -0.44
SNORD3D-201ENST00000619178 LIG1P18858 919 aa12.3□□□□□ -0.44
SNORD3D-201ENST00000619178 CST5P28325 142 aaPredicted RBP12.3□□□□□ -0.44
SNORD3D-201ENST00000619178 CCND3P30281 292 aaPredicted RBP12.3□□□□□ -0.44
SNORD3D-201ENST00000619178 PRKCEQ02156 737 aa12.3□□□□□ -0.44
SNORD3D-201ENST00000619178 UTP14CQ5TAP6 766 aaKnown RBP12.3□□□□□ -0.44
SNORD3D-201ENST00000619178 POTEGQ6S5H5 508 aa12.3□□□□□ -0.44
SNORD3D-201ENST00000619178 USP49Q70CQ1 688 aa12.3□□□□□ -0.44
SNORD3D-201ENST00000619178 CCDC60Q8IWA6 550 aaPredicted RBP12.3□□□□□ -0.44
SNORD3D-201ENST00000619178 COPS5Q92905 334 aa12.3□□□□□ -0.44
SNORD3D-201ENST00000619178 TSEN34Q9BSV6 310 aaKnown RBP12.3□□□□□ -0.44
SNORD3D-201ENST00000619178 PANK2Q9BZ23 570 aa12.3□□□□□ -0.44
SNORD3D-201ENST00000619178 GOLPH3LQ9H4A5 285 aa12.3□□□□□ -0.44
SNORD3D-201ENST00000619178 TUT1Q9H6E5 874 aaKnown RBP12.3□□□□□ -0.44
SNORD3D-201ENST00000619178 RMND1Q9NWS8 449 aa12.3□□□□□ -0.44
SNORD3D-201ENST00000619178 RGL1Q9NZL6 768 aa12.3□□□□□ -0.44
SNORD3D-201ENST00000619178 SEPT9Q9UHD8 586 aaPredicted RBP12.3□□□□□ -0.44
SNORD3D-201ENST00000619178 SERTAD1Q9UHV2 236 aa12.3□□□□□ -0.44
SNORD3D-201ENST00000619178 SYNRGQ9UMZ2 1314 aa12.3□□□□□ -0.44
SNORD3D-201ENST00000619178 MOXD2PA6NHM9 499 aa12.29□□□□□ -0.44
SNORD3D-201ENST00000619178 RPLP2P05387 115 aaKnown RBP12.29□□□□□ -0.44
SNORD3D-201ENST00000619178 SSBP05455 408 aaKnown RBP eCLIP12.29□□□□□ -0.44
SNORD3D-201ENST00000619178 PLA2G4BP0C869 781 aa12.29□□□□□ -0.44
SNORD3D-201ENST00000619178 GNAT1P11488 350 aa12.29□□□□□ -0.44
SNORD3D-201ENST00000619178 RFC5P40937 340 aa12.29□□□□□ -0.44
SNORD3D-201ENST00000619178 CAP1Q01518 475 aa12.29□□□□□ -0.44
SNORD3D-201ENST00000619178 SNW1Q13573 536 aaKnown RBP12.29□□□□□ -0.44
SNORD3D-201ENST00000619178 XKR9Q5GH70 373 aa12.29□□□□□ -0.44
SNORD3D-201ENST00000619178 ZNF484Q5JVG2 852 aa12.29□□□□□ -0.44
SNORD3D-201ENST00000619178 SYT2Q8N9I0 419 aaPredicted RBP12.29□□□□□ -0.44
SNORD3D-201ENST00000619178 MCPH1Q8NEM0 835 aa12.29□□□□□ -0.44
SNORD3D-201ENST00000619178 TRPV1Q8NER1 839 aa12.29□□□□□ -0.44
SNORD3D-201ENST00000619178 GPT2Q8TD30 523 aa12.29□□□□□ -0.44
SNORD3D-201ENST00000619178 ATP8B4Q8TF62 1192 aa12.29□□□□□ -0.44
SNORD3D-201ENST00000619178 PNMA5Q96PV4 448 aa12.29□□□□□ -0.44
SNORD3D-201ENST00000619178 PLIN2Q99541 437 aa12.29□□□□□ -0.44
SNORD3D-201ENST00000619178 MTG1Q9BT17 334 aaPredicted RBP12.29□□□□□ -0.44
SNORD3D-201ENST00000619178 BHMT2Q9H2M3 363 aa12.29□□□□□ -0.44
SNORD3D-201ENST00000619178 CLSTN2Q9H4D0 955 aa12.29□□□□□ -0.44
SNORD3D-201ENST00000619178 TRPC6Q9Y210 931 aa12.29□□□□□ -0.44
SNORD3D-201ENST00000619178 RRN3P2A6NIE6 340 aa12.28□□□□□ -0.44
SNORD3D-201ENST00000619178 ACTN4O43707 911 aaKnown RBP12.28□□□□□ -0.44
SNORD3D-201ENST00000619178 GTPBP6O43824 516 aaPredicted RBP12.28□□□□□ -0.44
SNORD3D-201ENST00000619178 DGAT1O75907 488 aa12.28□□□□□ -0.44
SNORD3D-201ENST00000619178 MYL3P08590 195 aa12.28□□□□□ -0.44
SNORD3D-201ENST00000619178 ABCD1P33897 745 aa12.28□□□□□ -0.44
SNORD3D-201ENST00000619178 DNM2P50570 870 aa12.28□□□□□ -0.44
SNORD3D-201ENST00000619178 TRIM32Q13049 653 aa12.28□□□□□ -0.44
SNORD3D-201ENST00000619178 POSTNQ15063 836 aa12.28□□□□□ -0.44
SNORD3D-201ENST00000619178 E2F4Q16254 413 aa12.28□□□□□ -0.44
SNORD3D-201ENST00000619178 LONRF3Q496Y0 759 aa12.28□□□□□ -0.44
SNORD3D-201ENST00000619178 GJC2Q5T442 439 aaPredicted RBP12.28□□□□□ -0.44
SNORD3D-201ENST00000619178 CAVIN1Q6NZI2 390 aaKnown RBP12.28□□□□□ -0.44
SNORD3D-201ENST00000619178 RETREG2Q8NC44 543 aa12.28□□□□□ -0.44
SNORD3D-201ENST00000619178 SH3TC2Q8TF17 1288 aa12.28□□□□□ -0.44
SNORD3D-201ENST00000619178 TCP11Q8WWU5 503 aa12.28□□□□□ -0.44
SNORD3D-201ENST00000619178 SLC7A3Q8WY07 619 aa12.28□□□□□ -0.44
SNORD3D-201ENST00000619178 SMARCE1Q969G3 411 aa12.28□□□□□ -0.44
SNORD3D-201ENST00000619178 CEP170P1Q96L14 293 aa12.28□□□□□ -0.44
SNORD3D-201ENST00000619178 TMEM106CQ9BVX2 250 aa12.28□□□□□ -0.44
SNORD3D-201ENST00000619178 NIFKQ9BYG3 293 aaKnown RBP12.28□□□□□ -0.44
SNORD3D-201ENST00000619178 RNF208Q9H0X6 261 aa12.28□□□□□ -0.44
SNORD3D-201ENST00000619178 KBTBD4Q9NVX7 518 aa12.28□□□□□ -0.44
SNORD3D-201ENST00000619178 ODF2LQ9ULJ1 636 aa12.28□□□□□ -0.44
SNORD3D-201ENST00000619178 SIP14410 1827 aa12.27□□□□□ -0.44
SNORD3D-201ENST00000619178 E9PMD0 336 aa12.27□□□□□ -0.45
SNORD3D-201ENST00000619178 MAGEB2O15479 319 aa12.27□□□□□ -0.45
SNORD3D-201ENST00000619178 TBCAO75347 108 aaKnown RBP12.27□□□□□ -0.45
SNORD3D-201ENST00000619178 F2P00734 622 aa12.27□□□□□ -0.45
SNORD3D-201ENST00000619178 CCL5P13501 91 aa12.27□□□□□ -0.45
SNORD3D-201ENST00000619178 SCP2P22307 547 aa12.27□□□□□ -0.45
SNORD3D-201ENST00000619178 TMOD1P28289 359 aa12.27□□□□□ -0.45
SNORD3D-201ENST00000619178 AFMP43652 599 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms