RNA–Protein interactions for RNA: ENST00000619138.4

CNTNAP3B-215, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 3,840 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-215ENST00000619138 KIF5BP33176 963 aa14.95□□□□□ -0.02
CNTNAP3B-215ENST00000619138 ZNF844Q08AG5 666 aa14.95□□□□□ -0.02
CNTNAP3B-215ENST00000619138 MAN2A1Q16706 1144 aa14.95□□□□□ -0.02
CNTNAP3B-215ENST00000619138 FAM83BQ5T0W9 1011 aa14.95□□□□□ -0.02
CNTNAP3B-215ENST00000619138 GDAP1Q8TB36 358 aa14.95□□□□□ -0.02
CNTNAP3B-215ENST00000619138 POLD1P28340 1107 aa14.94□□□□□ -0.02
CNTNAP3B-215ENST00000619138 TNNI2P48788 182 aa14.94□□□□□ -0.02
CNTNAP3B-215ENST00000619138 CDC37Q16543 378 aaPredicted RBP14.94□□□□□ -0.02
CNTNAP3B-215ENST00000619138 ZFYVE27Q5T4F4 411 aa14.94□□□□□ -0.02
CNTNAP3B-215ENST00000619138 PIK3R5Q8WYR1 880 aa14.94□□□□□ -0.02
CNTNAP3B-215ENST00000619138 MRRFQ96E11 262 aaKnown RBP14.94□□□□□ -0.02
CNTNAP3B-215ENST00000619138 BCS1LQ9Y276 419 aa14.94□□□□□ -0.02
CNTNAP3B-215ENST00000619138 C4AP0C0L4 1744 aa14.94□□□□□ -0.02
CNTNAP3B-215ENST00000619138 RASSF9O75901 435 aa14.94□□□□□ -0.02
CNTNAP3B-215ENST00000619138 CHN1P15882 459 aa14.94□□□□□ -0.02
CNTNAP3B-215ENST00000619138 EIF6P56537 245 aaKnown RBP14.94□□□□□ -0.02
CNTNAP3B-215ENST00000619138 SEC23AQ15436 765 aa14.94□□□□□ -0.02
CNTNAP3B-215ENST00000619138 GNPTABQ3T906 1256 aa14.94□□□□□ -0.02
CNTNAP3B-215ENST00000619138 FAM228AQ86W67 206 aa14.94□□□□□ -0.02
CNTNAP3B-215ENST00000619138 DCP1AQ9NPI6 582 aaPredicted RBP14.94□□□□□ -0.02
CNTNAP3B-215ENST00000619138 INTS9Q9NV88 658 aaKnown RBP14.94□□□□□ -0.02
CNTNAP3B-215ENST00000619138 TNRC6CQ9HCJ0 1690 aaKnown RBP14.94□□□□□ -0.02
CNTNAP3B-215ENST00000619138 H0Y3Z8 333 aa14.94□□□□□ -0.02
CNTNAP3B-215ENST00000619138 KLRC4O43908 158 aa14.94□□□□□ -0.02
CNTNAP3B-215ENST00000619138 ANP32DO95626 131 aa14.94□□□□□ -0.02
CNTNAP3B-215ENST00000619138 PNMA1Q8ND90 353 aa14.94□□□□□ -0.02
CNTNAP3B-215ENST00000619138 SNX29Q8TEQ0 813 aa14.94□□□□□ -0.02
CNTNAP3B-215ENST00000619138 U2AF1L4Q8WU68 220 aaKnown RBP14.94□□□□□ -0.02
CNTNAP3B-215ENST00000619138 SERPINA10Q9UK55 444 aa14.94□□□□□ -0.02
CNTNAP3B-215ENST00000619138 AKAP11Q9UKA4 1901 aa14.94□□□□□ -0.02
CNTNAP3B-215ENST00000619138 MYH15Q9Y2K3 1946 aa14.94□□□□□ -0.02
CNTNAP3B-215ENST00000619138 UBR3Q6ZT12 1888 aa14.94□□□□□ -0.02
CNTNAP3B-215ENST00000619138 RGS16O15492 202 aaPredicted RBP14.93□□□□□ -0.02
CNTNAP3B-215ENST00000619138 CAND2O75155 1236 aa14.93□□□□□ -0.02
CNTNAP3B-215ENST00000619138 RHOBTB3O94955 611 aa14.93□□□□□ -0.02
CNTNAP3B-215ENST00000619138 PDHA1P08559 390 aa14.93□□□□□ -0.02
CNTNAP3B-215ENST00000619138 EPB41P11171 864 aaKnown RBP14.93□□□□□ -0.02
CNTNAP3B-215ENST00000619138 TCP10Q12799 353 aa14.93□□□□□ -0.02
CNTNAP3B-215ENST00000619138 SLC44A5Q8NCS7 719 aa14.93□□□□□ -0.02
CNTNAP3B-215ENST00000619138 LRRC15Q8TF66 581 aa14.93□□□□□ -0.02
CNTNAP3B-215ENST00000619138 PRMT1Q99873 361 aaKnown RBP14.93□□□□□ -0.02
CNTNAP3B-215ENST00000619138 AZI2Q9H6S1 392 aa14.93□□□□□ -0.02
CNTNAP3B-215ENST00000619138 CHORDC1Q9UHD1 332 aaPredicted RBP14.93□□□□□ -0.02
CNTNAP3B-215ENST00000619138 UTP11Q9Y3A2 253 aaKnown RBP14.93□□□□□ -0.02
CNTNAP3B-215ENST00000619138 CNTNAP5Q8WYK1 1306 aa14.93□□□□□ -0.02
CNTNAP3B-215ENST00000619138 A8MUI8 341 aa14.93□□□□□ -0.02
CNTNAP3B-215ENST00000619138 LGR5O75473 907 aa14.93□□□□□ -0.02
CNTNAP3B-215ENST00000619138 CALM1P0DP23 149 aa14.93□□□□□ -0.02
CNTNAP3B-215ENST00000619138 CALM2P0DP24 149 aa14.93□□□□□ -0.02
CNTNAP3B-215ENST00000619138 CALM3P0DP25 149 aa14.93□□□□□ -0.02
CNTNAP3B-215ENST00000619138 DPEP1P16444 411 aa14.93□□□□□ -0.02
CNTNAP3B-215ENST00000619138 ERFP50548 548 aa14.93□□□□□ -0.02
CNTNAP3B-215ENST00000619138 CACNB3P54284 484 aa14.93□□□□□ -0.02
CNTNAP3B-215ENST00000619138 SESN3P58005 492 aa14.93□□□□□ -0.02
CNTNAP3B-215ENST00000619138 ALX1Q15699 326 aa14.93□□□□□ -0.02
CNTNAP3B-215ENST00000619138 ZNF444Q8N0Y2 327 aaPredicted RBP14.93□□□□□ -0.02
CNTNAP3B-215ENST00000619138 KIAA0895Q8NCT3 520 aa14.93□□□□□ -0.02
CNTNAP3B-215ENST00000619138 SLC17A8Q8NDX2 589 aa14.93□□□□□ -0.02
CNTNAP3B-215ENST00000619138 COA1Q9GZY4 146 aa14.93□□□□□ -0.02
CNTNAP3B-215ENST00000619138 PTPN22Q9Y2R2 807 aa14.93□□□□□ -0.02
CNTNAP3B-215ENST00000619138 MPHOSPH10O00566 681 aaKnown RBP14.93□□□□□ -0.02
CNTNAP3B-215ENST00000619138 OR52Z1P0C646 297 aa14.93□□□□□ -0.02
CNTNAP3B-215ENST00000619138 KCNB1Q14721 858 aa14.93□□□□□ -0.02
CNTNAP3B-215ENST00000619138 GLE1Q53GS7 698 aaKnown RBP14.93□□□□□ -0.02
CNTNAP3B-215ENST00000619138 PDXDC1Q6P996 788 aa14.93□□□□□ -0.02
CNTNAP3B-215ENST00000619138 CCDC50Q8IVM0 306 aa14.93□□□□□ -0.02
CNTNAP3B-215ENST00000619138 LRRC34Q8IZ02 419 aa14.93□□□□□ -0.02
CNTNAP3B-215ENST00000619138 LARGE2Q8N3Y3 721 aa14.93□□□□□ -0.02
CNTNAP3B-215ENST00000619138 KLHL29Q96CT2 875 aa14.93□□□□□ -0.02
CNTNAP3B-215ENST00000619138 PSMD1Q99460 953 aa14.93□□□□□ -0.02
CNTNAP3B-215ENST00000619138 TMEM260Q9NX78 707 aa14.93□□□□□ -0.02
CNTNAP3B-215ENST00000619138 ATP6V1G2O95670 118 aa14.92□□□□□ -0.02
CNTNAP3B-215ENST00000619138 SLF2Q8IX21 1173 aa14.92□□□□□ -0.02
CNTNAP3B-215ENST00000619138 TBC1D22AQ8WUA7 517 aa14.92□□□□□ -0.02
CNTNAP3B-215ENST00000619138 GLG1Q92896 1179 aa14.92□□□□□ -0.02
CNTNAP3B-215ENST00000619138 CHMP6Q96FZ7 201 aa14.92□□□□□ -0.02
CNTNAP3B-215ENST00000619138 TTYH3Q9C0H2 523 aa14.92□□□□□ -0.02
CNTNAP3B-215ENST00000619138 NOC2LQ9Y3T9 749 aaKnown RBP14.92□□□□□ -0.02
CNTNAP3B-215ENST00000619138 FGGP02679 453 aa14.92□□□□□ -0.02
CNTNAP3B-215ENST00000619138 NPY5RQ15761 445 aa14.92□□□□□ -0.02
CNTNAP3B-215ENST00000619138 TTLL6Q8N841 843 aa14.92□□□□□ -0.02
CNTNAP3B-215ENST00000619138 DBR1Q9UK59 544 aaKnown RBP14.92□□□□□ -0.02
CNTNAP3B-215ENST00000619138 PCDHA4Q9UN74 947 aa14.92□□□□□ -0.02
CNTNAP3B-215ENST00000619138 FOXO6A8MYZ6 492 aa14.92□□□□□ -0.02
CNTNAP3B-215ENST00000619138 RAD17O75943 681 aa14.92□□□□□ -0.02
CNTNAP3B-215ENST00000619138 HERC4Q5GLZ8 1057 aaPredicted RBP14.92□□□□□ -0.02
CNTNAP3B-215ENST00000619138 SPICE1Q8N0Z3 855 aa14.92□□□□□ -0.02
CNTNAP3B-215ENST00000619138 USP38Q8NB14 1042 aa14.92□□□□□ -0.02
CNTNAP3B-215ENST00000619138 GDF3Q9NR23 364 aa14.92□□□□□ -0.02
CNTNAP3B-215ENST00000619138 EVI5O60447 810 aa14.91□□□□□ -0.02
CNTNAP3B-215ENST00000619138 FGFR1OPO95684 399 aaKnown RBP14.91□□□□□ -0.02
CNTNAP3B-215ENST00000619138 TSPY3P0CV98 308 aa14.91□□□□□ -0.02
CNTNAP3B-215ENST00000619138 TSPY8P0CW00 308 aa14.91□□□□□ -0.02
CNTNAP3B-215ENST00000619138 PCK1P35558 622 aa14.91□□□□□ -0.02
CNTNAP3B-215ENST00000619138 VPS41P49754 854 aa14.91□□□□□ -0.02
CNTNAP3B-215ENST00000619138 KCNJ2P63252 427 aa14.91□□□□□ -0.02
CNTNAP3B-215ENST00000619138 ELF3P78545 371 aaPredicted RBP14.91□□□□□ -0.02
CNTNAP3B-215ENST00000619138 PFKFB3Q16875 520 aaPredicted RBP14.91□□□□□ -0.02
CNTNAP3B-215ENST00000619138 CUL5Q93034 780 aa14.91□□□□□ -0.02
CNTNAP3B-215ENST00000619138 ADAM33Q9BZ11 813 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms