RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-223ENST00000618944 SND1Q7KZF4 910 aaKnown RBP eCLIP12.3□□□□□ -0.44
TP53-223ENST00000618944 RNF10Q8N5U6 811 aaKnown RBP12.3□□□□□ -0.44
TP53-223ENST00000618944 SPAG5Q96R06 1193 aa12.3□□□□□ -0.44
TP53-223ENST00000618944 TMEM51Q9NW97 253 aa12.3□□□□□ -0.44
TP53-223ENST00000618944 AIPL1Q9NZN9 384 aa12.3□□□□□ -0.44
TP53-223ENST00000618944 TRAF3IP3Q9Y228 551 aa12.3□□□□□ -0.44
TP53-223ENST00000618944 RABGAP1Q9Y3P9 1069 aa12.3□□□□□ -0.44
TP53-223ENST00000618944 ANKRD31Q8N7Z5 1873 aa12.3□□□□□ -0.44
TP53-223ENST00000618944 MYH4Q9Y623 1939 aa12.3□□□□□ -0.44
TP53-223ENST00000618944 TBCAO75347 108 aaKnown RBP12.3□□□□□ -0.44
TP53-223ENST00000618944 AFPP02771 609 aaKnown RBP12.3□□□□□ -0.44
TP53-223ENST00000618944 NR3C1P04150 777 aa12.3□□□□□ -0.44
TP53-223ENST00000618944 XRCC5P13010 732 aaKnown RBP12.3□□□□□ -0.44
TP53-223ENST00000618944 PON1P27169 355 aa12.3□□□□□ -0.44
TP53-223ENST00000618944 NMT1P30419 496 aaKnown RBP12.3□□□□□ -0.44
TP53-223ENST00000618944 EXOC3L4Q17RC7 722 aa12.3□□□□□ -0.44
TP53-223ENST00000618944 ZC2HC1CQ53FD0 456 aaPredicted RBP12.3□□□□□ -0.44
TP53-223ENST00000618944 PPP4R3CPQ6ZMV5 832 aa12.3□□□□□ -0.44
TP53-223ENST00000618944 EPM2AIP1Q7L775 607 aaPredicted RBP12.3□□□□□ -0.44
TP53-223ENST00000618944 ZNF571Q7Z3V5 609 aaPredicted RBP12.3□□□□□ -0.44
TP53-223ENST00000618944 FRMD5Q7Z6J6 570 aa12.3□□□□□ -0.44
TP53-223ENST00000618944 ZC3H3Q8IXZ2 948 aaKnown RBP12.3□□□□□ -0.44
TP53-223ENST00000618944 DYDC2Q96IM9 177 aa12.3□□□□□ -0.44
TP53-223ENST00000618944 WDR18Q9BV38 432 aa12.3□□□□□ -0.44
TP53-223ENST00000618944 C10orf71Q711Q0 1435 aa12.3□□□□□ -0.44
TP53-223ENST00000618944 YDJCA8MPS7 323 aa12.29□□□□□ -0.44
TP53-223ENST00000618944 UCHL3P15374 230 aa12.29□□□□□ -0.44
TP53-223ENST00000618944 CIITAP33076 1130 aa12.29□□□□□ -0.44
TP53-223ENST00000618944 STAT2P52630 851 aa12.29□□□□□ -0.44
TP53-223ENST00000618944 TAF3Q5VWG9 929 aa12.29□□□□□ -0.44
TP53-223ENST00000618944 RINT1Q6NUQ1 792 aa12.29□□□□□ -0.44
TP53-223ENST00000618944 IRF2BP2Q7Z5L9 587 aa12.29□□□□□ -0.44
TP53-223ENST00000618944 MYCT1Q8N699 235 aa12.29□□□□□ -0.44
TP53-223ENST00000618944 GOLPH3Q9H4A6 298 aa12.29□□□□□ -0.44
TP53-223ENST00000618944 VIPAS39Q9H9C1 493 aa12.29□□□□□ -0.44
TP53-223ENST00000618944 MED4Q9NPJ6 270 aa12.29□□□□□ -0.44
TP53-223ENST00000618944 PSD3Q9NYI0 1048 aa12.29□□□□□ -0.44
TP53-223ENST00000618944 AGPSO00116 658 aa12.29□□□□□ -0.44
TP53-223ENST00000618944 PDXKO00764 312 aa12.29□□□□□ -0.44
TP53-223ENST00000618944 SLITRK3O94933 977 aa12.29□□□□□ -0.44
TP53-223ENST00000618944 EYA4O95677 639 aa12.29□□□□□ -0.44
TP53-223ENST00000618944 MMP14P50281 582 aa12.29□□□□□ -0.44
TP53-223ENST00000618944 FKBP1AP62942 108 aaKnown RBP12.29□□□□□ -0.44
TP53-223ENST00000618944 KCTD19Q17RG1 926 aaPredicted RBP12.29□□□□□ -0.44
TP53-223ENST00000618944 CFAP221Q4G0U5 840 aa12.29□□□□□ -0.44
TP53-223ENST00000618944 CC2D2BQ6DHV5 1058 aa12.29□□□□□ -0.44
TP53-223ENST00000618944 OTOP1Q7RTM1 612 aa12.29□□□□□ -0.44
TP53-223ENST00000618944 RBM46Q8TBY0 533 aaKnown RBP12.29□□□□□ -0.44
TP53-223ENST00000618944 LUC7LQ9NQ29 371 aaKnown RBP12.29□□□□□ -0.44
TP53-223ENST00000618944 ZC3H4Q9UPT8 1303 aaKnown RBP12.28□□□□□ -0.44
TP53-223ENST00000618944 IGLV3-22A0A075B6J6 115 aa12.28□□□□□ -0.44
TP53-223ENST00000618944 PPIP5K2O43314 1243 aa12.28□□□□□ -0.44
TP53-223ENST00000618944 SLC26A4O43511 780 aa12.28□□□□□ -0.44
TP53-223ENST00000618944 C21orf2O43822 256 aa12.28□□□□□ -0.44
TP53-223ENST00000618944 NOP2P46087 812 aaKnown RBP12.28□□□□□ -0.44
TP53-223ENST00000618944 AARSP49588 968 aaKnown RBP eCLIP12.28□□□□□ -0.44
TP53-223ENST00000618944 LRCH2Q5VUJ6 765 aa12.28□□□□□ -0.44
TP53-223ENST00000618944 MCTP2Q6DN12 878 aa12.28□□□□□ -0.44
TP53-223ENST00000618944 DPY19L2P1Q6NXN4 242 aa12.28□□□□□ -0.44
TP53-223ENST00000618944 BTNL9Q6UXG8 535 aa12.28□□□□□ -0.44
TP53-223ENST00000618944 ARHGAP27Q6ZUM4 889 aa12.28□□□□□ -0.44
TP53-223ENST00000618944 MIGA2Q7L4E1 593 aa12.28□□□□□ -0.44
TP53-223ENST00000618944 ZNF572Q7Z3I7 529 aaPredicted RBP12.28□□□□□ -0.44
TP53-223ENST00000618944 AENQ8WTP8 325 aaKnown RBP12.28□□□□□ -0.44
TP53-223ENST00000618944 AJAP1Q9UKB5 411 aaPredicted RBP12.28□□□□□ -0.44
TP53-223ENST00000618944 ASTN1O14525 1302 aa12.28□□□□□ -0.44
TP53-223ENST00000618944 ENTPD3O75355 529 aa12.28□□□□□ -0.44
TP53-223ENST00000618944 RAD17O75943 681 aa12.28□□□□□ -0.44
TP53-223ENST00000618944 FAM13AO94988 1023 aa12.28□□□□□ -0.44
TP53-223ENST00000618944 COG2Q14746 738 aa12.28□□□□□ -0.44
TP53-223ENST00000618944 SKIDA1Q1XH10 827 aa12.28□□□□□ -0.44
TP53-223ENST00000618944 STYK1Q6J9G0 422 aa12.28□□□□□ -0.44
TP53-223ENST00000618944 C8orf74Q6P047 294 aa12.28□□□□□ -0.44
TP53-223ENST00000618944 CDAN1Q8IWY9 1227 aa12.28□□□□□ -0.44
TP53-223ENST00000618944 HSD17B14Q9BPX1 270 aa12.28□□□□□ -0.44
TP53-223ENST00000618944 POLR3CQ9BUI4 534 aaPredicted RBP12.28□□□□□ -0.44
TP53-223ENST00000618944 QSER1Q2KHR3 1735 aa12.27□□□□□ -0.44
TP53-223ENST00000618944 ESYT3A0FGR9 886 aa12.27□□□□□ -0.44
TP53-223ENST00000618944 GRID2IPA4D2P6 1211 aa12.27□□□□□ -0.44
TP53-223ENST00000618944 GOLGA6BA6NDN3 693 aa12.27□□□□□ -0.44
TP53-223ENST00000618944 ZSCAN5CA6NGD5 496 aaPredicted RBP12.27□□□□□ -0.44
TP53-223ENST00000618944 GCOM1H8Y6P7 765 aaPredicted RBP12.27□□□□□ -0.44
TP53-223ENST00000618944 TULP1O00294 542 aaPredicted RBP12.27□□□□□ -0.44
TP53-223ENST00000618944 PLSCR1O15162 318 aa12.27□□□□□ -0.44
TP53-223ENST00000618944 TGFB1I1O43294 461 aa12.27□□□□□ -0.44
TP53-223ENST00000618944 NPM3O75607 178 aaKnown RBP12.27□□□□□ -0.44
TP53-223ENST00000618944 CYP3A4P08684 503 aa12.27□□□□□ -0.44
TP53-223ENST00000618944 POLR2MP0CAP2 368 aa12.27□□□□□ -0.44
TP53-223ENST00000618944 EPB41P11171 864 aaKnown RBP12.27□□□□□ -0.44
TP53-223ENST00000618944 RPL13P26373 211 aaKnown RBP12.27□□□□□ -0.44
TP53-223ENST00000618944 ACTN2P35609 894 aa12.27□□□□□ -0.44
TP53-223ENST00000618944 IRX5P78411 483 aaPredicted RBP12.27□□□□□ -0.44
TP53-223ENST00000618944 PLS1Q14651 629 aa12.27□□□□□ -0.44
TP53-223ENST00000618944 EPHA7Q15375 998 aa12.27□□□□□ -0.44
TP53-223ENST00000618944 GOLGA6L1Q8N7Z2 621 aa12.27□□□□□ -0.44
TP53-223ENST00000618944 IFT81Q8WYA0 676 aa12.27□□□□□ -0.44
TP53-223ENST00000618944 ARHGEF10LQ9HCE6 1279 aa12.27□□□□□ -0.44
TP53-223ENST00000618944 TYW1Q9NV66 732 aaKnown RBP12.27□□□□□ -0.44
TP53-223ENST00000618944 PKD2L1Q9P0L9 805 aa12.27□□□□□ -0.44
TP53-223ENST00000618944 STIM2Q9P246 746 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms