RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 CNOT6LQ96LI5 555 aaKnown RBP16.06■□□□□ 0.16
COL5A1-208ENST00000618395 EPS8L2Q9H6S3 715 aa16.06■□□□□ 0.16
COL5A1-208ENST00000618395 FAM81AQ8TBF8 368 aa16.06■□□□□ 0.16
COL5A1-208ENST00000618395 EMC3Q9P0I2 261 aa16.06■□□□□ 0.16
COL5A1-208ENST00000618395 ZMYM4Q5VZL5 1548 aa16.06■□□□□ 0.16
COL5A1-208ENST00000618395 SERPINB8P50452 374 aa16.06■□□□□ 0.16
COL5A1-208ENST00000618395 ST7Q9NRC1 585 aa16.06■□□□□ 0.16
COL5A1-208ENST00000618395 AHCYL1O43865 530 aa16.06■□□□□ 0.16
COL5A1-208ENST00000618395 BTKQ06187 659 aa16.06■□□□□ 0.16
COL5A1-208ENST00000618395 KRT31Q15323 416 aa16.06■□□□□ 0.16
COL5A1-208ENST00000618395 SGSM1Q2NKQ1 1148 aa16.06■□□□□ 0.16
COL5A1-208ENST00000618395 VSTM4Q8IW00 320 aa16.06■□□□□ 0.16
COL5A1-208ENST00000618395 TAF1DQ9H5J8 278 aaPredicted RBP16.06■□□□□ 0.16
COL5A1-208ENST00000618395 SLC52A1Q9NWF4 448 aa16.06■□□□□ 0.16
COL5A1-208ENST00000618395 CABP7Q86V35 215 aa16.06■□□□□ 0.16
COL5A1-208ENST00000618395 NELFCDQ8IXH7 590 aa16.06■□□□□ 0.16
COL5A1-208ENST00000618395 SEPT1Q8WYJ6 367 aa16.06■□□□□ 0.16
COL5A1-208ENST00000618395 FAM192AQ9GZU8 254 aa16.06■□□□□ 0.16
COL5A1-208ENST00000618395 CROCCQ5TZA2 2017 aa16.05■□□□□ 0.16
COL5A1-208ENST00000618395 OCM2P0CE71 109 aa16.05■□□□□ 0.16
COL5A1-208ENST00000618395 OCMP0CE72 109 aaPredicted RBP16.05■□□□□ 0.16
COL5A1-208ENST00000618395 MAPK4P31152 587 aa16.05■□□□□ 0.16
COL5A1-208ENST00000618395 IL15P40933 162 aaPredicted RBP16.05■□□□□ 0.16
COL5A1-208ENST00000618395 FCHO2Q0JRZ9 810 aa16.05■□□□□ 0.16
COL5A1-208ENST00000618395 AP1M1Q9BXS5 423 aa16.05■□□□□ 0.16
COL5A1-208ENST00000618395 AZI2Q9H6S1 392 aa16.05■□□□□ 0.16
COL5A1-208ENST00000618395 PRELID1Q9Y255 219 aa16.05■□□□□ 0.16
COL5A1-208ENST00000618395 KPNA7A9QM74 516 aa16.05■□□□□ 0.16
COL5A1-208ENST00000618395 MECOMQ03112 1051 aa16.05■□□□□ 0.16
COL5A1-208ENST00000618395 MAPRE2Q15555 327 aa16.05■□□□□ 0.16
COL5A1-208ENST00000618395 ARMC3Q5W041 872 aa16.05■□□□□ 0.16
COL5A1-208ENST00000618395 TBC1D9BQ66K14 1250 aa16.05■□□□□ 0.16
COL5A1-208ENST00000618395 ZSCAN9O15535 394 aaPredicted RBP16.05■□□□□ 0.16
COL5A1-208ENST00000618395 TUBA3CQ13748 450 aa16.05■□□□□ 0.16
COL5A1-208ENST00000618395 MAGEB6Q8N7X4 407 aa16.05■□□□□ 0.16
COL5A1-208ENST00000618395 TBCCQ15814 346 aa16.05■□□□□ 0.16
COL5A1-208ENST00000618395 ZNF263O14978 683 aa16.05■□□□□ 0.16
COL5A1-208ENST00000618395 RGS5O15539 181 aa16.05■□□□□ 0.16
COL5A1-208ENST00000618395 TRIM13O60858 407 aa16.05■□□□□ 0.16
COL5A1-208ENST00000618395 KCNA2P16389 499 aa16.05■□□□□ 0.16
COL5A1-208ENST00000618395 NACA2Q9H009 215 aa16.05■□□□□ 0.16
COL5A1-208ENST00000618395 ANKLE2Q86XL3 938 aa16.05■□□□□ 0.16
COL5A1-208ENST00000618395 EPAS1Q99814 870 aa16.05■□□□□ 0.16
COL5A1-208ENST00000618395 AP3B1O00203 1094 aa16.04■□□□□ 0.16
COL5A1-208ENST00000618395 BAIAP3O94812 1187 aa16.04■□□□□ 0.16
COL5A1-208ENST00000618395 SLC20A2Q08357 652 aa16.04■□□□□ 0.16
COL5A1-208ENST00000618395 C16orf72Q14CZ0 275 aa16.04■□□□□ 0.16
COL5A1-208ENST00000618395 TAF1BQ53T94 588 aaPredicted RBP16.04■□□□□ 0.16
COL5A1-208ENST00000618395 UBE4BO95155 1302 aa16.04■□□□□ 0.16
COL5A1-208ENST00000618395 SPDYE2BA6NHP3 402 aa16.04■□□□□ 0.16
COL5A1-208ENST00000618395 LPXNO60711 386 aa16.04■□□□□ 0.16
COL5A1-208ENST00000618395 SPDYE6P0CI01 402 aa16.04■□□□□ 0.16
COL5A1-208ENST00000618395 ATP2B4P23634 1241 aa16.04■□□□□ 0.16
COL5A1-208ENST00000618395 PUDPQ08623 228 aa16.04■□□□□ 0.16
COL5A1-208ENST00000618395 TAB3Q8N5C8 712 aaPredicted RBP16.04■□□□□ 0.16
COL5A1-208ENST00000618395 DNAAF3Q8N9W5 541 aa16.04■□□□□ 0.16
COL5A1-208ENST00000618395 STAMQ92783 540 aa16.04■□□□□ 0.16
COL5A1-208ENST00000618395 PPIP5K2O43314 1243 aa16.04■□□□□ 0.16
COL5A1-208ENST00000618395 AP1G2O75843 785 aa16.04■□□□□ 0.16
COL5A1-208ENST00000618395 COPS2P61201 443 aa16.04■□□□□ 0.16
COL5A1-208ENST00000618395 DEPDC7Q96QD5 511 aa16.04■□□□□ 0.16
COL5A1-208ENST00000618395 MLPHQ9BV36 600 aaPredicted RBP16.04■□□□□ 0.16
COL5A1-208ENST00000618395 MLXIPLQ9NP71 852 aa16.04■□□□□ 0.16
COL5A1-208ENST00000618395 PTCD1O75127 700 aaKnown RBP16.04■□□□□ 0.16
COL5A1-208ENST00000618395 FTCDO95954 541 aa16.04■□□□□ 0.16
COL5A1-208ENST00000618395 POTEEQ6S8J3 1075 aa16.04■□□□□ 0.16
COL5A1-208ENST00000618395 CLEC4FQ8N1N0 589 aa16.04■□□□□ 0.16
COL5A1-208ENST00000618395 RNF217Q8TC41 542 aa16.04■□□□□ 0.16
COL5A1-208ENST00000618395 NMD3Q96D46 503 aaKnown RBP16.04■□□□□ 0.16
COL5A1-208ENST00000618395 KRT87PA6NCN2 255 aa16.04■□□□□ 0.16
COL5A1-208ENST00000618395 CLPTM1O96005 669 aa16.04■□□□□ 0.16
COL5A1-208ENST00000618395 ITKQ08881 620 aa16.04■□□□□ 0.16
COL5A1-208ENST00000618395 ATP6V1HQ9UI12 483 aa16.04■□□□□ 0.16
COL5A1-208ENST00000618395 SFI1A8K8P3 1242 aa16.04■□□□□ 0.16
COL5A1-208ENST00000618395 MYBL1P10243 752 aa16.04■□□□□ 0.16
COL5A1-208ENST00000618395 ARHGEF25Q86VW2 580 aa16.04■□□□□ 0.16
COL5A1-208ENST00000618395 CD209Q9NNX6 404 aa16.04■□□□□ 0.16
COL5A1-208ENST00000618395 CCT8L1PA6NM43 557 aa16.04■□□□□ 0.16
COL5A1-208ENST00000618395 TRIM24O15164 1050 aa16.04■□□□□ 0.16
COL5A1-208ENST00000618395 JAK2O60674 1132 aa16.04■□□□□ 0.16
COL5A1-208ENST00000618395 KRT38O76015 456 aa16.04■□□□□ 0.16
COL5A1-208ENST00000618395 NUP62P37198 522 aaPredicted RBP16.04■□□□□ 0.16
COL5A1-208ENST00000618395 TP53BP2Q13625 1128 aa16.04■□□□□ 0.16
COL5A1-208ENST00000618395 SH3BP5LQ7L8J4 393 aa16.04■□□□□ 0.16
COL5A1-208ENST00000618395 WDR60Q8WVS4 1066 aa16.04■□□□□ 0.16
COL5A1-208ENST00000618395 OLFM1Q99784 485 aa16.04■□□□□ 0.16
COL5A1-208ENST00000618395 C19orf44Q9H6X5 657 aa16.04■□□□□ 0.16
COL5A1-208ENST00000618395 RABGEF1Q9UJ41 708 aa16.04■□□□□ 0.16
COL5A1-208ENST00000618395 BRAFP15056 766 aa16.03■□□□□ 0.16
COL5A1-208ENST00000618395 TTC33Q6PID6 262 aaPredicted RBP16.03■□□□□ 0.16
COL5A1-208ENST00000618395 CMTM5Q96DZ9 223 aa16.03■□□□□ 0.16
COL5A1-208ENST00000618395 NRDE2Q9H7Z3 1164 aa16.03■□□□□ 0.16
COL5A1-208ENST00000618395 SERPING1P05155 500 aa16.03■□□□□ 0.16
COL5A1-208ENST00000618395 KRT16P08779 473 aa16.03■□□□□ 0.16
COL5A1-208ENST00000618395 PMS2P54278 862 aa16.03■□□□□ 0.16
COL5A1-208ENST00000618395 GTPBP6O43824 516 aaPredicted RBP16.03■□□□□ 0.16
COL5A1-208ENST00000618395 SCN3BQ9NY72 215 aa16.03■□□□□ 0.16
COL5A1-208ENST00000618395 KDSRQ06136 332 aa16.03■□□□□ 0.16
COL5A1-208ENST00000618395 TRIP10Q15642 601 aa16.03■□□□□ 0.16
COL5A1-208ENST00000618395 MICU2Q8IYU8 434 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms