RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 LRRN4CLQ8ND94 238 aa19.36■□□□□ 0.69
CNOT3-209ENST00000617930 TRERF1Q96PN7 1200 aa19.36■□□□□ 0.69
CNOT3-209ENST00000617930 REXO2Q9Y3B8 237 aaKnown RBP19.36■□□□□ 0.69
CNOT3-209ENST00000617930 FRMPD4Q14CM0 1322 aa19.36■□□□□ 0.69
CNOT3-209ENST00000617930 DDX39AO00148 427 aaKnown RBP19.35■□□□□ 0.69
CNOT3-209ENST00000617930 TKFCQ3LXA3 575 aa19.35■□□□□ 0.69
CNOT3-209ENST00000617930 SNRNP48Q6IEG0 339 aaKnown RBP19.35■□□□□ 0.69
CNOT3-209ENST00000617930 ZC3H3Q8IXZ2 948 aaKnown RBP19.35■□□□□ 0.69
CNOT3-209ENST00000617930 OR8K1Q8NGG5 319 aa19.35■□□□□ 0.69
CNOT3-209ENST00000617930 IKZF4Q9H2S9 585 aa19.35■□□□□ 0.69
CNOT3-209ENST00000617930 EHMT1Q9H9B1 1298 aa19.35■□□□□ 0.69
CNOT3-209ENST00000617930 BTBD7Q9P203 1132 aa19.35■□□□□ 0.69
CNOT3-209ENST00000617930 STK24Q9Y6E0 443 aa19.35■□□□□ 0.69
CNOT3-209ENST00000617930 BCRP11274 1271 aa19.35■□□□□ 0.69
CNOT3-209ENST00000617930 EIF2AK2P19525 551 aaKnown RBP19.35■□□□□ 0.69
CNOT3-209ENST00000617930 HOXA7P31268 230 aaPredicted RBP19.35■□□□□ 0.69
CNOT3-209ENST00000617930 FKBP3Q00688 224 aaKnown RBP19.35■□□□□ 0.69
CNOT3-209ENST00000617930 SETQ01105 290 aaPredicted RBP19.35■□□□□ 0.69
CNOT3-209ENST00000617930 PPIL2Q13356 520 aa19.35■□□□□ 0.69
CNOT3-209ENST00000617930 PCNX4Q63HM2 1172 aa19.35■□□□□ 0.69
CNOT3-209ENST00000617930 MCF2L2Q86YR7 1114 aa19.35■□□□□ 0.69
CNOT3-209ENST00000617930 TMTC1Q8IUR5 882 aa19.35■□□□□ 0.69
CNOT3-209ENST00000617930 BANK1Q8NDB2 785 aa19.35■□□□□ 0.69
CNOT3-209ENST00000617930 LUC7L2Q9Y383 392 aaKnown RBP19.35■□□□□ 0.69
CNOT3-209ENST00000617930 PRPF6O94906 941 aaKnown RBP19.34■□□□□ 0.69
CNOT3-209ENST00000617930 PGM5Q15124 567 aa19.34■□□□□ 0.69
CNOT3-209ENST00000617930 EPHA7Q15375 998 aa19.34■□□□□ 0.69
CNOT3-209ENST00000617930 MAN2A1Q16706 1144 aa19.34■□□□□ 0.69
CNOT3-209ENST00000617930 ERCC6LQ2NKX8 1250 aa19.34■□□□□ 0.69
CNOT3-209ENST00000617930 GPAT2Q6NUI2 795 aa19.34■□□□□ 0.69
CNOT3-209ENST00000617930 ARMC9Q7Z3E5 817 aa19.34■□□□□ 0.69
CNOT3-209ENST00000617930 RIT2Q99578 217 aa19.34■□□□□ 0.69
CNOT3-209ENST00000617930 AGO4Q9HCK5 861 aaKnown RBP19.34■□□□□ 0.69
CNOT3-209ENST00000617930 RNF146Q9NTX7 359 aa19.34■□□□□ 0.69
CNOT3-209ENST00000617930 ATP9AO75110 1047 aa19.34■□□□□ 0.69
CNOT3-209ENST00000617930 TPM1P09493 284 aa19.34■□□□□ 0.69
CNOT3-209ENST00000617930 CCDC175P0C221 793 aa19.34■□□□□ 0.69
CNOT3-209ENST00000617930 KCNMA1Q12791 1236 aa19.34■□□□□ 0.69
CNOT3-209ENST00000617930 CYP26C1Q6V0L0 522 aa19.34■□□□□ 0.69
CNOT3-209ENST00000617930 KRT222Q8N1A0 295 aa19.34■□□□□ 0.69
CNOT3-209ENST00000617930 FIZ1Q96SL8 496 aa19.34■□□□□ 0.69
CNOT3-209ENST00000617930 TSG101Q99816 390 aa19.34■□□□□ 0.69
CNOT3-209ENST00000617930 TEKT3Q9BXF9 490 aa19.34■□□□□ 0.69
CNOT3-209ENST00000617930 LZTFL1Q9NQ48 299 aa19.34■□□□□ 0.69
CNOT3-209ENST00000617930 COL4A3BPQ9Y5P4 624 aa19.34■□□□□ 0.69
CNOT3-209ENST00000617930 GOLGA6L9A6NEM1 432 aa19.33■□□□□ 0.68
CNOT3-209ENST00000617930 CXCL11O14625 94 aa19.33■□□□□ 0.68
CNOT3-209ENST00000617930 MEA1Q16626 185 aa19.33■□□□□ 0.68
CNOT3-209ENST00000617930 MNS1Q8NEH6 495 aa19.33■□□□□ 0.68
CNOT3-209ENST00000617930 LXNQ9BS40 222 aa19.33■□□□□ 0.68
CNOT3-209ENST00000617930 JADE2Q9NQC1 790 aa19.33■□□□□ 0.68
CNOT3-209ENST00000617930 ATP2A1O14983 1001 aa19.32■□□□□ 0.68
CNOT3-209ENST00000617930 CNMDO75829 334 aa19.32■□□□□ 0.68
CNOT3-209ENST00000617930 URI1O94763 535 aaPredicted RBP19.32■□□□□ 0.68
CNOT3-209ENST00000617930 TRIM21P19474 475 aaKnown RBP19.32■□□□□ 0.68
CNOT3-209ENST00000617930 ARHGAP25P42331 645 aa19.32■□□□□ 0.68
CNOT3-209ENST00000617930 BAATQ14032 418 aaPredicted RBP19.32■□□□□ 0.68
CNOT3-209ENST00000617930 LBX2Q6XYB7 198 aa19.32■□□□□ 0.68
CNOT3-209ENST00000617930 RNF207Q6ZRF8 634 aa19.32■□□□□ 0.68
CNOT3-209ENST00000617930 PROCA1Q8NCQ7 364 aaPredicted RBP19.32■□□□□ 0.68
CNOT3-209ENST00000617930 PDCD2LQ9BRP1 358 aa19.32■□□□□ 0.68
CNOT3-209ENST00000617930 MYPNQ86TC9 1320 aa19.32■□□□□ 0.68
CNOT3-209ENST00000617930 FDX1P10109 184 aa19.32■□□□□ 0.68
CNOT3-209ENST00000617930 NSMFQ6X4W1 530 aa19.32■□□□□ 0.68
CNOT3-209ENST00000617930 NIPA1Q7RTP0 329 aa19.32■□□□□ 0.68
CNOT3-209ENST00000617930 SMCR8Q8TEV9 937 aaPredicted RBP19.32■□□□□ 0.68
CNOT3-209ENST00000617930 ASCC2Q9H1I8 757 aaPredicted RBP19.32■□□□□ 0.68
CNOT3-209ENST00000617930 PXMP2Q9NR77 195 aa19.32■□□□□ 0.68
CNOT3-209ENST00000617930 ZHX1Q9UKY1 873 aaPredicted RBP19.32■□□□□ 0.68
CNOT3-209ENST00000617930 NMT1P30419 496 aaKnown RBP19.31■□□□□ 0.68
CNOT3-209ENST00000617930 MARSP56192 900 aaKnown RBP19.31■□□□□ 0.68
CNOT3-209ENST00000617930 GNG11P61952 73 aa19.31■□□□□ 0.68
CNOT3-209ENST00000617930 GABPB1Q06547 395 aaPredicted RBP19.31■□□□□ 0.68
CNOT3-209ENST00000617930 ADAM9Q13443 819 aa19.31■□□□□ 0.68
CNOT3-209ENST00000617930 KNOP1Q1ED39 458 aaKnown RBP19.31■□□□□ 0.68
CNOT3-209ENST00000617930 FIGNQ5HY92 759 aa19.31■□□□□ 0.68
CNOT3-209ENST00000617930 CST9Q5W186 159 aa19.31■□□□□ 0.68
CNOT3-209ENST00000617930 TRIM59Q8IWR1 403 aa19.31■□□□□ 0.68
CNOT3-209ENST00000617930 KCTD17Q8N5Z5 321 aa19.31■□□□□ 0.68
CNOT3-209ENST00000617930 CEP63Q96MT8 703 aa19.31■□□□□ 0.68
CNOT3-209ENST00000617930 RMDN3Q96TC7 470 aa19.31■□□□□ 0.68
CNOT3-209ENST00000617930 TXNRD2Q9NNW7 524 aa19.31■□□□□ 0.68
CNOT3-209ENST00000617930 FAM207AQ9NSI2 230 aaPredicted RBP19.31■□□□□ 0.68
CNOT3-209ENST00000617930 MAP3K20Q9NYL2 800 aaKnown RBP19.31■□□□□ 0.68
CNOT3-209ENST00000617930 TFR2Q9UP52 801 aa19.31■□□□□ 0.68
CNOT3-209ENST00000617930 TRAF3IP3Q9Y228 551 aa19.31■□□□□ 0.68
CNOT3-209ENST00000617930 FGFR1OPO95684 399 aaKnown RBP19.3■□□□□ 0.68
CNOT3-209ENST00000617930 ITGBL1O95965 494 aaPredicted RBP19.3■□□□□ 0.68
CNOT3-209ENST00000617930 MYCLP12524 364 aaPredicted RBP19.3■□□□□ 0.68
CNOT3-209ENST00000617930 OAZ1P54368 228 aa19.3■□□□□ 0.68
CNOT3-209ENST00000617930 APBA1Q02410 837 aa19.3■□□□□ 0.68
CNOT3-209ENST00000617930 MKRN3Q13064 507 aaKnown RBP19.3■□□□□ 0.68
CNOT3-209ENST00000617930 MTMR1Q13613 665 aa19.3■□□□□ 0.68
CNOT3-209ENST00000617930 BMT2Q1RMZ1 405 aa19.3■□□□□ 0.68
CNOT3-209ENST00000617930 ZC2HC1CQ53FD0 456 aaPredicted RBP19.3■□□□□ 0.68
CNOT3-209ENST00000617930 FKBP15Q5T1M5 1219 aa19.3■□□□□ 0.68
CNOT3-209ENST00000617930 KSR1Q8IVT5 923 aa19.3■□□□□ 0.68
CNOT3-209ENST00000617930 RETREG2Q8NC44 543 aa19.3■□□□□ 0.68
CNOT3-209ENST00000617930 NUP58Q9BVL2 599 aa19.3■□□□□ 0.68
CNOT3-209ENST00000617930 HOXC10Q9NYD6 342 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms