RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 DPEP1P16444 411 aa3.65□□□□□ -1.83
LPP-220ENST00000617246 HPDP32754 393 aaPredicted RBP3.65□□□□□ -1.83
LPP-220ENST00000617246 DCAF4Q8WV16 495 aa3.65□□□□□ -1.83
LPP-220ENST00000617246 NAA15Q9BXJ9 866 aaKnown RBP3.65□□□□□ -1.83
LPP-220ENST00000617246 KANSL2Q9H9L4 492 aa3.65□□□□□ -1.83
LPP-220ENST00000617246 TMEM232C9JQI7 657 aa3.65□□□□□ -1.83
LPP-220ENST00000617246 APOEP02649 317 aa3.65□□□□□ -1.83
LPP-220ENST00000617246 SCG2P13521 617 aa3.65□□□□□ -1.83
LPP-220ENST00000617246 PER3P56645 1201 aa3.65□□□□□ -1.83
LPP-220ENST00000617246 ZNF438Q7Z4V0 828 aa3.65□□□□□ -1.83
LPP-220ENST00000617246 SLC12A5Q9H2X9 1139 aa3.65□□□□□ -1.83
LPP-220ENST00000617246 TRPC7Q9HCX4 862 aa3.65□□□□□ -1.83
LPP-220ENST00000617246 INO80B-WBP1J3KQ70 363 aa3.65□□□□□ -1.83
LPP-220ENST00000617246 LAG3P18627 525 aa3.65□□□□□ -1.83
LPP-220ENST00000617246 SPA17Q15506 151 aa3.65□□□□□ -1.83
LPP-220ENST00000617246 CLUL1Q15846 466 aa3.65□□□□□ -1.83
LPP-220ENST00000617246 PRPF38BQ5VTL8 546 aaKnown RBP3.65□□□□□ -1.83
LPP-220ENST00000617246 TMC7Q7Z402 723 aa3.65□□□□□ -1.83
LPP-220ENST00000617246 SPATA24Q86W54 205 aa3.65□□□□□ -1.83
LPP-220ENST00000617246 SUCOQ9UBS9 1254 aaKnown RBP3.65□□□□□ -1.83
LPP-220ENST00000617246 SERPINB13Q9UIV8 391 aa3.65□□□□□ -1.83
LPP-220ENST00000617246 KDRP35968 1356 aa3.65□□□□□ -1.83
LPP-220ENST00000617246 PPIL2Q13356 520 aa3.65□□□□□ -1.83
LPP-220ENST00000617246 ARHGEF7Q14155 803 aa3.65□□□□□ -1.83
LPP-220ENST00000617246 SIX6OS1Q8N1H7 587 aa3.65□□□□□ -1.83
LPP-220ENST00000617246 DEXIO95424 95 aa3.65□□□□□ -1.83
LPP-220ENST00000617246 MNAT1P51948 309 aa3.65□□□□□ -1.83
LPP-220ENST00000617246 ZNF558Q96NG5 402 aa3.65□□□□□ -1.83
LPP-220ENST00000617246 C11orf84Q9BUA3 381 aaPredicted RBP3.65□□□□□ -1.83
LPP-220ENST00000617246 ARHGAP42A6NI28 874 aa3.65□□□□□ -1.83
LPP-220ENST00000617246 UNCXA6NJT0 531 aa3.65□□□□□ -1.83
LPP-220ENST00000617246 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.65□□□□□ -1.83
LPP-220ENST00000617246 CHMP2AO43633 222 aa3.65□□□□□ -1.83
LPP-220ENST00000617246 SERPINC1P01008 464 aa3.65□□□□□ -1.83
LPP-220ENST00000617246 ERCC1P07992 297 aaPredicted RBP3.65□□□□□ -1.83
LPP-220ENST00000617246 FAM117BQ6P1L5 589 aa3.65□□□□□ -1.83
LPP-220ENST00000617246 LUZP2Q86TE4 346 aa3.65□□□□□ -1.83
LPP-220ENST00000617246 KDM4FA0A1W2PPD8 638 aa3.65□□□□□ -1.83
LPP-220ENST00000617246 ARHGAP4P98171 946 aa3.65□□□□□ -1.83
LPP-220ENST00000617246 SLC9C2Q5TAH2 1124 aa3.65□□□□□ -1.83
LPP-220ENST00000617246 ZNF512Q96ME7 567 aaPredicted RBP3.65□□□□□ -1.83
LPP-220ENST00000617246 K7ENM7 598 aa3.65□□□□□ -1.83
LPP-220ENST00000617246 CTAGE5O15320 804 aa3.65□□□□□ -1.83
LPP-220ENST00000617246 LINS1Q8NG48 757 aa3.65□□□□□ -1.83
LPP-220ENST00000617246 GOLGA5Q8TBA6 731 aa3.65□□□□□ -1.83
LPP-220ENST00000617246 LRRC4Q9HBW1 653 aa3.65□□□□□ -1.83
LPP-220ENST00000617246 PRDM10Q9NQV6 1147 aa3.65□□□□□ -1.83
LPP-220ENST00000617246 DZANK1Q9NVP4 752 aa3.65□□□□□ -1.83
LPP-220ENST00000617246 PKD2L1Q9P0L9 805 aa3.65□□□□□ -1.83
LPP-220ENST00000617246 DDAH1O94760 285 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 TBCCQ15814 346 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 CCDC13Q8IYE1 715 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 ZNF655Q8N720 491 aaPredicted RBP3.64□□□□□ -1.83
LPP-220ENST00000617246 FLCNQ8NFG4 579 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 USP13Q92995 863 aaPredicted RBP3.64□□□□□ -1.83
LPP-220ENST00000617246 NECTIN4Q96NY8 510 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 SECISBP2Q96T21 854 aaKnown RBP3.64□□□□□ -1.83
LPP-220ENST00000617246 KIF17Q9P2E2 1029 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 KANSL3Q9P2N6 904 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 MYMKA6NI61 221 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 A6NJR5 290 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 CNPP09543 421 aaKnown RBP3.64□□□□□ -1.83
LPP-220ENST00000617246 HOXC12P31275 282 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 MTIF2P46199 727 aaKnown RBP3.64□□□□□ -1.83
LPP-220ENST00000617246 SATB1Q01826 763 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 PPATQ06203 517 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 STAT4Q14765 748 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 SCIMPQ6UWF3 145 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 FAM43BQ6ZT52 329 aaPredicted RBP3.64□□□□□ -1.83
LPP-220ENST00000617246 IFT122Q9HBG6 1241 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 ZBTB43O43298 467 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 TNNI1P19237 187 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 RPIAP49247 311 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 PLCB3Q01970 1234 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 CPA6Q8N4T0 437 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 DHX38Q92620 1227 aaKnown RBP3.64□□□□□ -1.83
LPP-220ENST00000617246 PPP1R13BQ96KQ4 1090 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 TRAIPQ9BWF2 469 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 BCAS3Q9H6U6 928 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 RUVBL2Q9Y230 463 aaKnown RBP3.64□□□□□ -1.83
LPP-220ENST00000617246 BCRP11274 1271 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 MCOLN3Q8TDD5 553 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 SYT17Q9BSW7 474 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 ENTPD3O75355 529 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 SCNN1BP51168 640 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 NFKBIBQ15653 356 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 CCDC6Q16204 474 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 KIAA1328Q86T90 577 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 SPAG5Q96R06 1193 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 CCDC189A1A4V9 331 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 MAGEA9P43362 315 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 HADHQ16836 314 aaKnown RBP3.64□□□□□ -1.83
LPP-220ENST00000617246 SV2CQ496J9 727 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 KANK4Q5T7N3 995 aaPredicted RBP3.64□□□□□ -1.83
LPP-220ENST00000617246 HYOU1Q9Y4L1 999 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 GAS2O43903 313 aaKnown RBP3.64□□□□□ -1.83
LPP-220ENST00000617246 AKT1P31749 480 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 LACTBP83111 547 aaPredicted RBP3.64□□□□□ -1.83
LPP-220ENST00000617246 LEKR1Q6ZMV7 388 aa3.64□□□□□ -1.83
LPP-220ENST00000617246 ANKRD44Q8N8A2 993 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms