RNA–Protein interactions for RNA: ENST00000617128.1

SNORD3B-1-202, Transcript of small nucleolar RNA, C/D box 3B-1, humanhuman

Gene SNORD3B-1, Length 218 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3B-1-202ENST00000617128 POTEB3A0JP26 581 aa12.31□□□□□ -0.44
SNORD3B-1-202ENST00000617128 ARHGEF35A5YM69 484 aa12.31□□□□□ -0.44
SNORD3B-1-202ENST00000617128 MED24O75448 989 aa12.31□□□□□ -0.44
SNORD3B-1-202ENST00000617128 LGR5O75473 907 aa12.31□□□□□ -0.44
SNORD3B-1-202ENST00000617128 CABYRO75952 493 aa12.31□□□□□ -0.44
SNORD3B-1-202ENST00000617128 SMC2O95347 1197 aa12.31□□□□□ -0.44
SNORD3B-1-202ENST00000617128 EYA4O95677 639 aa12.31□□□□□ -0.44
SNORD3B-1-202ENST00000617128 KRT18P05783 430 aaKnown RBP12.31□□□□□ -0.44
SNORD3B-1-202ENST00000617128 HOXD8P13378 290 aaPredicted RBP12.31□□□□□ -0.44
SNORD3B-1-202ENST00000617128 CDC25AP30304 524 aa12.31□□□□□ -0.44
SNORD3B-1-202ENST00000617128 YWHABP31946 246 aaKnown RBP12.31□□□□□ -0.44
SNORD3B-1-202ENST00000617128 NKX3-2P78367 333 aa12.31□□□□□ -0.44
SNORD3B-1-202ENST00000617128 GRB10Q13322 594 aa12.31□□□□□ -0.44
SNORD3B-1-202ENST00000617128 CTTNQ14247 550 aaKnown RBP12.31□□□□□ -0.44
SNORD3B-1-202ENST00000617128 TMEM119Q4V9L6 283 aa12.31□□□□□ -0.44
SNORD3B-1-202ENST00000617128 GNASQ5JWF2 1037 aa12.31□□□□□ -0.44
SNORD3B-1-202ENST00000617128 CCDC183Q5T5S1 534 aa12.31□□□□□ -0.44
SNORD3B-1-202ENST00000617128 POTEBQ6S5H4 581 aa12.31□□□□□ -0.44
SNORD3B-1-202ENST00000617128 ENGASEQ8NFI3 743 aa12.31□□□□□ -0.44
SNORD3B-1-202ENST00000617128 AFG1LQ8WV93 481 aa12.31□□□□□ -0.44
SNORD3B-1-202ENST00000617128 RAD54LQ92698 747 aa12.31□□□□□ -0.44
SNORD3B-1-202ENST00000617128 MMTAG2Q9BU76 263 aaKnown RBP12.31□□□□□ -0.44
SNORD3B-1-202ENST00000617128 SEZ6LQ9BYH1 1024 aa12.31□□□□□ -0.44
SNORD3B-1-202ENST00000617128 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.31□□□□□ -0.442e-12■■■■■ 172.7
SNORD3B-1-202ENST00000617128 POTEFA5A3E0 1075 aa12.3□□□□□ -0.44
SNORD3B-1-202ENST00000617128 KBTBD13C9JR72 458 aa12.3□□□□□ -0.44
SNORD3B-1-202ENST00000617128 H3BRB1 525 aa12.3□□□□□ -0.44
SNORD3B-1-202ENST00000617128 GAS2O43903 313 aaKnown RBP12.3□□□□□ -0.44
SNORD3B-1-202ENST00000617128 HBP1O60381 514 aa12.3□□□□□ -0.44
SNORD3B-1-202ENST00000617128 SORBS3O60504 671 aa12.3□□□□□ -0.44
SNORD3B-1-202ENST00000617128 NR1I2O75469 434 aa12.3□□□□□ -0.44
SNORD3B-1-202ENST00000617128 OATP04181 439 aa12.3□□□□□ -0.44
SNORD3B-1-202ENST00000617128 LGALS2P05162 132 aa12.3□□□□□ -0.44
SNORD3B-1-202ENST00000617128 SPATA31C1P0DKV0 1188 aa12.3□□□□□ -0.44
SNORD3B-1-202ENST00000617128 LIG1P18858 919 aa12.3□□□□□ -0.44
SNORD3B-1-202ENST00000617128 CST5P28325 142 aaPredicted RBP12.3□□□□□ -0.44
SNORD3B-1-202ENST00000617128 CCND3P30281 292 aaPredicted RBP12.3□□□□□ -0.44
SNORD3B-1-202ENST00000617128 PRKCEQ02156 737 aa12.3□□□□□ -0.44
SNORD3B-1-202ENST00000617128 UTP14CQ5TAP6 766 aaKnown RBP12.3□□□□□ -0.44
SNORD3B-1-202ENST00000617128 POTEGQ6S5H5 508 aa12.3□□□□□ -0.44
SNORD3B-1-202ENST00000617128 USP49Q70CQ1 688 aa12.3□□□□□ -0.44
SNORD3B-1-202ENST00000617128 CCDC60Q8IWA6 550 aaPredicted RBP12.3□□□□□ -0.44
SNORD3B-1-202ENST00000617128 COPS5Q92905 334 aa12.3□□□□□ -0.44
SNORD3B-1-202ENST00000617128 TSEN34Q9BSV6 310 aaKnown RBP12.3□□□□□ -0.44
SNORD3B-1-202ENST00000617128 PANK2Q9BZ23 570 aa12.3□□□□□ -0.44
SNORD3B-1-202ENST00000617128 GOLPH3LQ9H4A5 285 aa12.3□□□□□ -0.44
SNORD3B-1-202ENST00000617128 TUT1Q9H6E5 874 aaKnown RBP12.3□□□□□ -0.44
SNORD3B-1-202ENST00000617128 RMND1Q9NWS8 449 aa12.3□□□□□ -0.44
SNORD3B-1-202ENST00000617128 RGL1Q9NZL6 768 aa12.3□□□□□ -0.44
SNORD3B-1-202ENST00000617128 SEPT9Q9UHD8 586 aaPredicted RBP12.3□□□□□ -0.44
SNORD3B-1-202ENST00000617128 SERTAD1Q9UHV2 236 aa12.3□□□□□ -0.44
SNORD3B-1-202ENST00000617128 SYNRGQ9UMZ2 1314 aa12.3□□□□□ -0.44
SNORD3B-1-202ENST00000617128 MOXD2PA6NHM9 499 aa12.29□□□□□ -0.44
SNORD3B-1-202ENST00000617128 RPLP2P05387 115 aaKnown RBP12.29□□□□□ -0.44
SNORD3B-1-202ENST00000617128 SSBP05455 408 aaKnown RBP eCLIP12.29□□□□□ -0.446e-8■■■■□ 24
SNORD3B-1-202ENST00000617128 PLA2G4BP0C869 781 aa12.29□□□□□ -0.44
SNORD3B-1-202ENST00000617128 GNAT1P11488 350 aa12.29□□□□□ -0.44
SNORD3B-1-202ENST00000617128 RFC5P40937 340 aa12.29□□□□□ -0.44
SNORD3B-1-202ENST00000617128 CAP1Q01518 475 aa12.29□□□□□ -0.44
SNORD3B-1-202ENST00000617128 SNW1Q13573 536 aaKnown RBP12.29□□□□□ -0.44
SNORD3B-1-202ENST00000617128 XKR9Q5GH70 373 aa12.29□□□□□ -0.44
SNORD3B-1-202ENST00000617128 ZNF484Q5JVG2 852 aa12.29□□□□□ -0.44
SNORD3B-1-202ENST00000617128 SYT2Q8N9I0 419 aaPredicted RBP12.29□□□□□ -0.44
SNORD3B-1-202ENST00000617128 MCPH1Q8NEM0 835 aa12.29□□□□□ -0.44
SNORD3B-1-202ENST00000617128 TRPV1Q8NER1 839 aa12.29□□□□□ -0.44
SNORD3B-1-202ENST00000617128 GPT2Q8TD30 523 aa12.29□□□□□ -0.44
SNORD3B-1-202ENST00000617128 ATP8B4Q8TF62 1192 aa12.29□□□□□ -0.44
SNORD3B-1-202ENST00000617128 PNMA5Q96PV4 448 aa12.29□□□□□ -0.44
SNORD3B-1-202ENST00000617128 PLIN2Q99541 437 aa12.29□□□□□ -0.44
SNORD3B-1-202ENST00000617128 MTG1Q9BT17 334 aaPredicted RBP12.29□□□□□ -0.44
SNORD3B-1-202ENST00000617128 BHMT2Q9H2M3 363 aa12.29□□□□□ -0.44
SNORD3B-1-202ENST00000617128 CLSTN2Q9H4D0 955 aa12.29□□□□□ -0.44
SNORD3B-1-202ENST00000617128 TRPC6Q9Y210 931 aa12.29□□□□□ -0.44
SNORD3B-1-202ENST00000617128 RRN3P2A6NIE6 340 aa12.28□□□□□ -0.44
SNORD3B-1-202ENST00000617128 ACTN4O43707 911 aaKnown RBP12.28□□□□□ -0.44
SNORD3B-1-202ENST00000617128 GTPBP6O43824 516 aaPredicted RBP12.28□□□□□ -0.44
SNORD3B-1-202ENST00000617128 DGAT1O75907 488 aa12.28□□□□□ -0.44
SNORD3B-1-202ENST00000617128 MYL3P08590 195 aa12.28□□□□□ -0.44
SNORD3B-1-202ENST00000617128 ABCD1P33897 745 aa12.28□□□□□ -0.44
SNORD3B-1-202ENST00000617128 DNM2P50570 870 aa12.28□□□□□ -0.44
SNORD3B-1-202ENST00000617128 TRIM32Q13049 653 aa12.28□□□□□ -0.44
SNORD3B-1-202ENST00000617128 POSTNQ15063 836 aa12.28□□□□□ -0.44
SNORD3B-1-202ENST00000617128 E2F4Q16254 413 aa12.28□□□□□ -0.44
SNORD3B-1-202ENST00000617128 LONRF3Q496Y0 759 aa12.28□□□□□ -0.44
SNORD3B-1-202ENST00000617128 GJC2Q5T442 439 aaPredicted RBP12.28□□□□□ -0.44
SNORD3B-1-202ENST00000617128 CAVIN1Q6NZI2 390 aaKnown RBP12.28□□□□□ -0.44
SNORD3B-1-202ENST00000617128 RETREG2Q8NC44 543 aa12.28□□□□□ -0.44
SNORD3B-1-202ENST00000617128 SH3TC2Q8TF17 1288 aa12.28□□□□□ -0.44
SNORD3B-1-202ENST00000617128 TCP11Q8WWU5 503 aa12.28□□□□□ -0.44
SNORD3B-1-202ENST00000617128 SLC7A3Q8WY07 619 aa12.28□□□□□ -0.44
SNORD3B-1-202ENST00000617128 SMARCE1Q969G3 411 aa12.28□□□□□ -0.44
SNORD3B-1-202ENST00000617128 CEP170P1Q96L14 293 aa12.28□□□□□ -0.44
SNORD3B-1-202ENST00000617128 TMEM106CQ9BVX2 250 aa12.28□□□□□ -0.44
SNORD3B-1-202ENST00000617128 NIFKQ9BYG3 293 aaKnown RBP12.28□□□□□ -0.44
SNORD3B-1-202ENST00000617128 RNF208Q9H0X6 261 aa12.28□□□□□ -0.44
SNORD3B-1-202ENST00000617128 KBTBD4Q9NVX7 518 aa12.28□□□□□ -0.44
SNORD3B-1-202ENST00000617128 ODF2LQ9ULJ1 636 aa12.28□□□□□ -0.44
SNORD3B-1-202ENST00000617128 SIP14410 1827 aa12.27□□□□□ -0.44
SNORD3B-1-202ENST00000617128 E9PMD0 336 aa12.27□□□□□ -0.45
SNORD3B-1-202ENST00000617128 MAGEB2O15479 319 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms