RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 SLC37A4O43826 429 aa16.98■□□□□ 0.31
GPN1-212ENST00000616939 TRIM37O94972 964 aa16.98■□□□□ 0.31
GPN1-212ENST00000616939 SLC8A3P57103 927 aa16.98■□□□□ 0.31
GPN1-212ENST00000616939 RNASE9P60153 205 aaKnown RBP16.98■□□□□ 0.31
GPN1-212ENST00000616939 ELF3P78545 371 aaPredicted RBP16.98■□□□□ 0.31
GPN1-212ENST00000616939 SLC10A5Q5PT55 438 aa16.98■□□□□ 0.31
GPN1-212ENST00000616939 PEX26Q7Z412 305 aa16.98■□□□□ 0.31
GPN1-212ENST00000616939 NEDD1Q8NHV4 660 aa16.98■□□□□ 0.31
GPN1-212ENST00000616939 HOOK2Q96ED9 719 aa16.98■□□□□ 0.31
GPN1-212ENST00000616939 HES6Q96HZ4 224 aa16.98■□□□□ 0.31
GPN1-212ENST00000616939 ZNF317Q96PQ6 595 aaPredicted RBP16.98■□□□□ 0.31
GPN1-212ENST00000616939 UTP11Q9Y3A2 253 aaKnown RBP16.98■□□□□ 0.31
GPN1-212ENST00000616939 FOCADQ5VW36 1801 aa16.98■□□□□ 0.31
GPN1-212ENST00000616939 A0A1B0GUA9 196 aa16.98■□□□□ 0.31
GPN1-212ENST00000616939 FRMD3A2A2Y4 597 aa16.98■□□□□ 0.31
GPN1-212ENST00000616939 FAM187AA6NFU0 413 aa16.98■□□□□ 0.31
GPN1-212ENST00000616939 CETN3O15182 167 aa16.98■□□□□ 0.31
GPN1-212ENST00000616939 EDIL3O43854 480 aa16.98■□□□□ 0.31
GPN1-212ENST00000616939 FLT3P36888 993 aa16.98■□□□□ 0.31
GPN1-212ENST00000616939 ADCY7P51828 1080 aa16.98■□□□□ 0.31
GPN1-212ENST00000616939 DHX9Q08211 1270 aaKnown RBP16.98■□□□□ 0.31
GPN1-212ENST00000616939 MSL1Q68DK7 614 aa16.98■□□□□ 0.31
GPN1-212ENST00000616939 ALKBH5Q6P6C2 394 aaKnown RBP16.98■□□□□ 0.31
GPN1-212ENST00000616939 PIGWQ7Z7B1 504 aa16.98■□□□□ 0.31
GPN1-212ENST00000616939 NT5DC3Q86UY8 548 aa16.98■□□□□ 0.31
GPN1-212ENST00000616939 VPS36Q86VN1 386 aa16.98■□□□□ 0.31
GPN1-212ENST00000616939 DZIP1Q86YF9 867 aaKnown RBP16.98■□□□□ 0.31
GPN1-212ENST00000616939 TEX11Q8IYF3 940 aa16.98■□□□□ 0.31
GPN1-212ENST00000616939 ANKS4BQ8N8V4 417 aa16.98■□□□□ 0.31
GPN1-212ENST00000616939 ATP8B4Q8TF62 1192 aa16.98■□□□□ 0.31
GPN1-212ENST00000616939 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.98■□□□□ 0.31
GPN1-212ENST00000616939 BCCIPQ9P287 314 aaKnown RBP eCLIP16.98■□□□□ 0.31
GPN1-212ENST00000616939 BIN2Q9UBW5 565 aaPredicted RBP16.98■□□□□ 0.31
GPN1-212ENST00000616939 POTEMA6NI47 508 aa16.97■□□□□ 0.31
GPN1-212ENST00000616939 WTIPA6NIX2 430 aaPredicted RBP16.97■□□□□ 0.31
GPN1-212ENST00000616939 TULP1O00294 542 aaPredicted RBP16.97■□□□□ 0.31
GPN1-212ENST00000616939 ATP6V1G2O95670 118 aa16.97■□□□□ 0.31
GPN1-212ENST00000616939 H2AFZP0C0S5 128 aa16.97■□□□□ 0.31
GPN1-212ENST00000616939 EPS15P42566 896 aa16.97■□□□□ 0.31
GPN1-212ENST00000616939 MMP13P45452 471 aa16.97■□□□□ 0.31
GPN1-212ENST00000616939 GSTO1P78417 241 aa16.97■□□□□ 0.31
GPN1-212ENST00000616939 KCNH2Q12809 1159 aa16.97■□□□□ 0.31
GPN1-212ENST00000616939 SLMAPQ14BN4 828 aa16.97■□□□□ 0.31
GPN1-212ENST00000616939 H2AFVQ71UI9 128 aa16.97■□□□□ 0.31
GPN1-212ENST00000616939 MAB21L3Q8N8X9 362 aa16.97■□□□□ 0.31
GPN1-212ENST00000616939 NAP1L4Q99733 375 aaKnown RBP16.97■□□□□ 0.31
GPN1-212ENST00000616939 NUDT12Q9BQG2 462 aa16.97■□□□□ 0.31
GPN1-212ENST00000616939 TMEM109Q9BVC6 243 aa16.97■□□□□ 0.31
GPN1-212ENST00000616939 AP1M1Q9BXS5 423 aa16.97■□□□□ 0.31
GPN1-212ENST00000616939 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.97■□□□□ 0.31
GPN1-212ENST00000616939 PITPNM2Q9BZ72 1349 aa16.97■□□□□ 0.31
GPN1-212ENST00000616939 IRS2Q9Y4H2 1338 aa16.97■□□□□ 0.31
GPN1-212ENST00000616939 C10orf71Q711Q0 1435 aa16.96■□□□□ 0.31
GPN1-212ENST00000616939 TDP2O95551 362 aa16.96■□□□□ 0.31
GPN1-212ENST00000616939 DRG2P55039 364 aaKnown RBP16.96■□□□□ 0.31
GPN1-212ENST00000616939 PTENP60484 403 aa16.96■□□□□ 0.31
GPN1-212ENST00000616939 ATXN2LQ8WWM7 1075 aaKnown RBP16.96■□□□□ 0.31
GPN1-212ENST00000616939 PIGSQ96S52 555 aa16.96■□□□□ 0.31
GPN1-212ENST00000616939 FMO2Q99518 471 aa16.96■□□□□ 0.31
GPN1-212ENST00000616939 MXD3Q9BW11 206 aa16.96■□□□□ 0.31
GPN1-212ENST00000616939 TMEM260Q9NX78 707 aa16.96■□□□□ 0.31
GPN1-212ENST00000616939 STX8Q9UNK0 236 aa16.96■□□□□ 0.31
GPN1-212ENST00000616939 TTI1O43156 1089 aa16.96■□□□□ 0.3
GPN1-212ENST00000616939 AFPP02771 609 aaKnown RBP16.96■□□□□ 0.3
GPN1-212ENST00000616939 GOLGA8HP0CJ92 632 aa16.96■□□□□ 0.3
GPN1-212ENST00000616939 UCHL3P15374 230 aa16.96■□□□□ 0.3
GPN1-212ENST00000616939 GBP1P32455 592 aa16.96■□□□□ 0.3
GPN1-212ENST00000616939 JAM2P57087 298 aa16.96■□□□□ 0.3
GPN1-212ENST00000616939 ERFEQ4G0M1 354 aa16.96■□□□□ 0.3
GPN1-212ENST00000616939 DUPD1Q68J44 220 aa16.96■□□□□ 0.3
GPN1-212ENST00000616939 C3orf67Q6ZVT6 689 aa16.96■□□□□ 0.3
GPN1-212ENST00000616939 C16orf86Q6ZW13 317 aa16.96■□□□□ 0.3
GPN1-212ENST00000616939 CEP57Q86XR8 500 aa16.96■□□□□ 0.3
GPN1-212ENST00000616939 COL23A1Q86Y22 540 aaPredicted RBP16.96■□□□□ 0.3
GPN1-212ENST00000616939 BANK1Q8NDB2 785 aa16.96■□□□□ 0.3
GPN1-212ENST00000616939 SCFD1Q8WVM8 642 aa16.96■□□□□ 0.3
GPN1-212ENST00000616939 CUL5Q93034 780 aa16.96■□□□□ 0.3
GPN1-212ENST00000616939 SPAG5Q96R06 1193 aa16.96■□□□□ 0.3
GPN1-212ENST00000616939 NAP1L3Q99457 506 aaPredicted RBP16.96■□□□□ 0.3
GPN1-212ENST00000616939 EBF2Q9HAK2 575 aa16.96■□□□□ 0.3
GPN1-212ENST00000616939 NOD2Q9HC29 1040 aa16.96■□□□□ 0.3
GPN1-212ENST00000616939 AMACRQ9UHK6 382 aa16.96■□□□□ 0.3
GPN1-212ENST00000616939 HDAC9Q9UKV0 1011 aa16.96■□□□□ 0.3
GPN1-212ENST00000616939 TRAF3IP3Q9Y228 551 aa16.96■□□□□ 0.3
GPN1-212ENST00000616939 PLIN4Q96Q06 1357 aa16.95■□□□□ 0.3
GPN1-212ENST00000616939 CCDC169A6NNP5 214 aa16.95■□□□□ 0.3
GPN1-212ENST00000616939 PHF20L1A8MW92 1017 aa16.95■□□□□ 0.3
GPN1-212ENST00000616939 BAG3O95817 575 aa16.95■□□□□ 0.3
GPN1-212ENST00000616939 ITGA4P13612 1032 aa16.95■□□□□ 0.3
GPN1-212ENST00000616939 KLRK1P26718 216 aa16.95■□□□□ 0.3
GPN1-212ENST00000616939 ARID5AQ03989 594 aa16.95■□□□□ 0.3
GPN1-212ENST00000616939 DHX34Q14147 1143 aaKnown RBP16.95■□□□□ 0.3
GPN1-212ENST00000616939 BTNL9Q6UXG8 535 aa16.95■□□□□ 0.3
GPN1-212ENST00000616939 ZNF622Q969S3 477 aaKnown RBP eCLIP16.95■□□□□ 0.3
GPN1-212ENST00000616939 SCLT1Q96NL6 688 aa16.95■□□□□ 0.3
GPN1-212ENST00000616939 NSRP1Q9H0G5 558 aaKnown RBP16.95■□□□□ 0.3
GPN1-212ENST00000616939 EPB41L4BQ9H329 900 aa16.95■□□□□ 0.3
GPN1-212ENST00000616939 BATF3Q9NR55 127 aa16.95■□□□□ 0.3
GPN1-212ENST00000616939 ZDHHC18Q9NUE0 388 aa16.95■□□□□ 0.3
GPN1-212ENST00000616939 AMFRQ9UKV5 643 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms