RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 EHD2Q9NZN4 543 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 NAGPAQ9UK23 515 aa6.14□□□□□ -1.43
SYNCRIP-204ENST00000616122 IFNB1P01574 187 aa6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 FGGP02679 453 aa6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 GCLMP48507 274 aa6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 PLTPP55058 493 aa6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 SEPT7Q16181 437 aaKnown RBP6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 AOC3Q16853 763 aa6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 PAPD7Q5XG87 772 aaKnown RBP6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 WDR59Q6PJI9 974 aa6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 B4GALNT4Q76KP1 1039 aa6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 CYP2W1Q8TAV3 490 aa6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 IFT74Q96LB3 600 aa6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 PPANQ9NQ55 473 aaKnown RBP6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 UBR1Q8IWV7 1749 aa6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 EPHB6O15197 1021 aa6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 ENTPD3O75355 529 aa6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 ACTN1P12814 892 aa6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 PADI6Q6TGC4 694 aa6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 C4orf32Q8N8J7 132 aa6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 GLIS3Q8NEA6 775 aa6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 ACER1Q8TDN7 264 aa6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 SCLT1Q96NL6 688 aa6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 RAB17Q9H0T7 212 aa6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 MRC1P22897 1456 aa6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 EYA4O95677 639 aa6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 LMNB1P20700 586 aa6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 MAP2K1Q02750 393 aaPredicted RBP6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 PRKG1Q13976 671 aa6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 WDR44Q5JSH3 913 aa6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 TTLL6Q8N841 843 aa6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 SCFD1Q8WVM8 642 aa6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 CCDC114Q96M63 670 aa6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 REEP2Q9BRK0 252 aa6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 TLR10Q9BXR5 811 aa6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 UTP11Q9Y3A2 253 aaKnown RBP6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 ATRNO75882 1429 aa6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 SLIT3O75094 1523 aa6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 ZBED4O75132 1171 aa6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 CHRNA5P30532 468 aa6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 SHMT1P34896 483 aa6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 LIG3P49916 1009 aa6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 SF3A3Q12874 501 aaKnown RBP eCLIP6.13□□□□□ -1.431e-6■■■■□ 20.5
SYNCRIP-204ENST00000616122 MEA1Q16626 185 aa6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 LRRC55Q6ZSA7 311 aa6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 NT5C1BQ96P26 610 aa6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 AP1M1Q9BXS5 423 aa6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 ZBTB12Q9Y330 459 aaPredicted RBP6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 GJA3Q9Y6H8 435 aa6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 KIF4AO95239 1232 aa6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 KRT5P13647 590 aa6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 GGCXP38435 758 aa6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 HDLBPQ00341 1268 aaKnown RBP6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 PTK2Q05397 1052 aa6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 SPP2Q13103 211 aa6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 SLC35G1Q2M3R5 365 aa6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 GLE1Q53GS7 698 aaKnown RBP6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 TTC19Q6DKK2 380 aaPredicted RBP6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 TRAPPC11Q7Z392 1133 aa6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 FAM160B2Q86V87 743 aa6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 LDHDQ86WU2 507 aa6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 CERS5Q8N5B7 392 aa6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 HOOK2Q96ED9 719 aa6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 SEL1LQ9UBV2 794 aa6.13□□□□□ -1.43
SYNCRIP-204ENST00000616122 GAKO14976 1311 aa6.12□□□□□ -1.43
SYNCRIP-204ENST00000616122 AKAP3O75969 853 aa6.12□□□□□ -1.43
SYNCRIP-204ENST00000616122 NNTQ13423 1086 aa6.12□□□□□ -1.43
SYNCRIP-204ENST00000616122 DRAP1Q14919 205 aaPredicted RBP6.12□□□□□ -1.43
SYNCRIP-204ENST00000616122 APOBEC3HQ6NTF7 200 aaKnown RBP6.12□□□□□ -1.43
SYNCRIP-204ENST00000616122 CATSPER3Q86XQ3 398 aa6.12□□□□□ -1.43
SYNCRIP-204ENST00000616122 CCDC50Q8IVM0 306 aa6.12□□□□□ -1.43
SYNCRIP-204ENST00000616122 ZNF507Q8TCN5 953 aa6.12□□□□□ -1.43
SYNCRIP-204ENST00000616122 ATP6V0A1Q93050 837 aa6.12□□□□□ -1.43
SYNCRIP-204ENST00000616122 CEP170P1Q96L14 293 aa6.12□□□□□ -1.43
SYNCRIP-204ENST00000616122 PRMT6Q96LA8 375 aaPredicted RBP6.12□□□□□ -1.43
SYNCRIP-204ENST00000616122 LRRC4BQ9NT99 713 aa6.12□□□□□ -1.43
SYNCRIP-204ENST00000616122 ATP8A1Q9Y2Q0 1164 aa6.12□□□□□ -1.43
SYNCRIP-204ENST00000616122 PDE2AO00408 941 aaPredicted RBP6.12□□□□□ -1.43
SYNCRIP-204ENST00000616122 ATP2A1O14983 1001 aa6.12□□□□□ -1.43
SYNCRIP-204ENST00000616122 CARSP49589 748 aaKnown RBP6.12□□□□□ -1.43
SYNCRIP-204ENST00000616122 MTMR3Q13615 1198 aa6.12□□□□□ -1.43
SYNCRIP-204ENST00000616122 IL17AQ16552 155 aa6.12□□□□□ -1.43
SYNCRIP-204ENST00000616122 ARHGAP27Q6ZUM4 889 aa6.12□□□□□ -1.43
SYNCRIP-204ENST00000616122 CCDC121Q6ZUS5 278 aa6.12□□□□□ -1.43
SYNCRIP-204ENST00000616122 INTS8Q75QN2 995 aaKnown RBP6.12□□□□□ -1.43
SYNCRIP-204ENST00000616122 HAUS6Q7Z4H7 955 aa6.12□□□□□ -1.43
SYNCRIP-204ENST00000616122 MCF2L2Q86YR7 1114 aa6.12□□□□□ -1.43
SYNCRIP-204ENST00000616122 KIFAP3Q92845 792 aa6.12□□□□□ -1.43
SYNCRIP-204ENST00000616122 SLC35C1Q96A29 364 aa6.12□□□□□ -1.43
SYNCRIP-204ENST00000616122 FAM212AQ96EL1 285 aa6.12□□□□□ -1.43
SYNCRIP-204ENST00000616122 RMDN3Q96TC7 470 aa6.12□□□□□ -1.43
SYNCRIP-204ENST00000616122 VIPAS39Q9H9C1 493 aa6.12□□□□□ -1.43
SYNCRIP-204ENST00000616122 RBM12Q9NTZ6 932 aaKnown RBP6.12□□□□□ -1.43
SYNCRIP-204ENST00000616122 PODXL2Q9NZ53 605 aa6.12□□□□□ -1.43
SYNCRIP-204ENST00000616122 RRP15Q9Y3B9 282 aaKnown RBP6.12□□□□□ -1.43
SYNCRIP-204ENST00000616122 MON2Q7Z3U7 1717 aa6.12□□□□□ -1.43
SYNCRIP-204ENST00000616122 ECE2O60344 883 aa6.12□□□□□ -1.43
SYNCRIP-204ENST00000616122 N4BP1O75113 896 aaKnown RBP6.12□□□□□ -1.43
SYNCRIP-204ENST00000616122 YY1P25490 414 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms