RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 APTXQ7Z2E3 356 aaKnown RBP14.39□□□□□ -0.11
FOXN3-219ENST00000615335 KRT25Q7Z3Z0 450 aa14.39□□□□□ -0.11
FOXN3-219ENST00000615335 YTHDF3Q7Z739 585 aaKnown RBP14.39□□□□□ -0.11
FOXN3-219ENST00000615335 MB21D1Q8N884 522 aa14.39□□□□□ -0.11
FOXN3-219ENST00000615335 SMCR8Q8TEV9 937 aaPredicted RBP14.39□□□□□ -0.11
FOXN3-219ENST00000615335 BORCS6Q96GS4 357 aa14.39□□□□□ -0.11
FOXN3-219ENST00000615335 DESI2Q9BSY9 194 aa14.39□□□□□ -0.11
FOXN3-219ENST00000615335 CD248Q9HCU0 757 aa14.39□□□□□ -0.11
FOXN3-219ENST00000615335 MEIS2O14770 477 aa14.39□□□□□ -0.11
FOXN3-219ENST00000615335 PEX10O60683 326 aa14.39□□□□□ -0.11
FOXN3-219ENST00000615335 SYF2O95926 243 aaKnown RBP14.39□□□□□ -0.11
FOXN3-219ENST00000615335 SLC10A3P09131 477 aa14.39□□□□□ -0.11
FOXN3-219ENST00000615335 CCDC175P0C221 793 aa14.39□□□□□ -0.11
FOXN3-219ENST00000615335 EZRP15311 586 aaKnown RBP14.39□□□□□ -0.11
FOXN3-219ENST00000615335 CASP1P29466 404 aa14.39□□□□□ -0.11
FOXN3-219ENST00000615335 SMTNP53814 917 aa14.39□□□□□ -0.11
FOXN3-219ENST00000615335 FILIP1LQ4L180 1135 aa14.39□□□□□ -0.11
FOXN3-219ENST00000615335 ANKRD23Q86SG2 305 aa14.39□□□□□ -0.11
FOXN3-219ENST00000615335 KIAA1328Q86T90 577 aa14.39□□□□□ -0.11
FOXN3-219ENST00000615335 IGSF22Q8N9C0 903 aa14.39□□□□□ -0.11
FOXN3-219ENST00000615335 TBC1D5Q92609 795 aa14.39□□□□□ -0.11
FOXN3-219ENST00000615335 CTAGE1Q96RT6 745 aa14.39□□□□□ -0.11
FOXN3-219ENST00000615335 NAA15Q9BXJ9 866 aaKnown RBP14.39□□□□□ -0.11
FOXN3-219ENST00000615335 KLC4Q9NSK0 619 aa14.39□□□□□ -0.11
FOXN3-219ENST00000615335 RIPK3Q9Y572 518 aa14.39□□□□□ -0.11
FOXN3-219ENST00000615335 WNT7AO00755 349 aa14.38□□□□□ -0.11
FOXN3-219ENST00000615335 ATP2A1O14983 1001 aa14.38□□□□□ -0.11
FOXN3-219ENST00000615335 CLK2P49760 499 aaKnown RBP14.38□□□□□ -0.11
FOXN3-219ENST00000615335 RBL2Q08999 1139 aa14.38□□□□□ -0.11
FOXN3-219ENST00000615335 KARSQ15046 597 aaKnown RBP14.38□□□□□ -0.11
FOXN3-219ENST00000615335 NONOQ15233 471 aaKnown RBP eCLIP14.38□□□□□ -0.11
FOXN3-219ENST00000615335 INF2Q27J81 1249 aa14.38□□□□□ -0.11
FOXN3-219ENST00000615335 CDKAL1Q5VV42 579 aa14.38□□□□□ -0.11
FOXN3-219ENST00000615335 POTEEQ6S8J3 1075 aa14.38□□□□□ -0.11
FOXN3-219ENST00000615335 BCAS4Q8TDM0 211 aa14.38□□□□□ -0.11
FOXN3-219ENST00000615335 PTPN18Q99952 460 aa14.38□□□□□ -0.11
FOXN3-219ENST00000615335 BTBD7Q9P203 1132 aa14.38□□□□□ -0.11
FOXN3-219ENST00000615335 CPSF2Q9P2I0 782 aaKnown RBP14.38□□□□□ -0.11
FOXN3-219ENST00000615335 ADD3Q9UEY8 706 aaKnown RBP14.38□□□□□ -0.11
FOXN3-219ENST00000615335 SLC45A1Q9Y2W3 748 aa14.38□□□□□ -0.11
FOXN3-219ENST00000615335 MANSC4A6NHS7 340 aaPredicted RBP14.37□□□□□ -0.11
FOXN3-219ENST00000615335 SOWAHDA6NJG2 315 aa14.37□□□□□ -0.11
FOXN3-219ENST00000615335 SPDYE3A6NKU9 549 aa14.37□□□□□ -0.11
FOXN3-219ENST00000615335 LRRIQ3A6PVS8 624 aaPredicted RBP14.37□□□□□ -0.11
FOXN3-219ENST00000615335 PPP1R3GB7ZBB8 358 aa14.37□□□□□ -0.11
FOXN3-219ENST00000615335 GCOM1H8Y6P7 765 aaPredicted RBP14.37□□□□□ -0.11
FOXN3-219ENST00000615335 NFIBO00712 420 aa14.37□□□□□ -0.11
FOXN3-219ENST00000615335 POLR2MP0CAP2 368 aa14.37□□□□□ -0.11
FOXN3-219ENST00000615335 CCNHP51946 323 aaPredicted RBP14.37□□□□□ -0.11
FOXN3-219ENST00000615335 MTF1Q14872 753 aa14.37□□□□□ -0.11
FOXN3-219ENST00000615335 CEP85LQ5SZL2 805 aa14.37□□□□□ -0.11
FOXN3-219ENST00000615335 MCF2L2Q86YR7 1114 aa14.37□□□□□ -0.11
FOXN3-219ENST00000615335 RNF146Q9NTX7 359 aa14.37□□□□□ -0.11
FOXN3-219ENST00000615335 EIF3HO15372 352 aaKnown RBP eCLIP14.37□□□□□ -0.11
FOXN3-219ENST00000615335 PBX1P40424 430 aa14.37□□□□□ -0.11
FOXN3-219ENST00000615335 VSNL1P62760 191 aa14.37□□□□□ -0.11
FOXN3-219ENST00000615335 ATP2C1P98194 919 aaPredicted RBP14.37□□□□□ -0.11
FOXN3-219ENST00000615335 PTGDRQ13258 359 aa14.37□□□□□ -0.11
FOXN3-219ENST00000615335 PDCD2Q16342 344 aaPredicted RBP14.37□□□□□ -0.11
FOXN3-219ENST00000615335 SMYD4Q8IYR2 804 aaPredicted RBP14.37□□□□□ -0.11
FOXN3-219ENST00000615335 TBCKQ8TEA7 893 aa14.37□□□□□ -0.11
FOXN3-219ENST00000615335 CPLX3Q8WVH0 158 aa14.37□□□□□ -0.11
FOXN3-219ENST00000615335 CLEC4DQ8WXI8 215 aa14.37□□□□□ -0.11
FOXN3-219ENST00000615335 HHIPL1Q96JK4 782 aa14.37□□□□□ -0.11
FOXN3-219ENST00000615335 MRPL44Q9H9J2 332 aaKnown RBP14.37□□□□□ -0.11
FOXN3-219ENST00000615335 SUGCTQ9HAC7 445 aa14.37□□□□□ -0.11
FOXN3-219ENST00000615335 BATF3Q9NR55 127 aa14.37□□□□□ -0.11
FOXN3-219ENST00000615335 FAM155AB1AL88 458 aaPredicted RBP14.36□□□□□ -0.11
FOXN3-219ENST00000615335 MYO1FO00160 1098 aa14.36□□□□□ -0.11
FOXN3-219ENST00000615335 PIK3CDO00329 1044 aa14.36□□□□□ -0.11
FOXN3-219ENST00000615335 MEFVO15553 781 aaPredicted RBP14.36□□□□□ -0.11
FOXN3-219ENST00000615335 CYP4F22Q6NT55 531 aa14.36□□□□□ -0.11
FOXN3-219ENST00000615335 SPATC1LQ9H0A9 340 aa14.36□□□□□ -0.11
FOXN3-219ENST00000615335 ATP6V0A4Q9HBG4 840 aa14.36□□□□□ -0.11
FOXN3-219ENST00000615335 RBPJLQ9UBG7 517 aa14.36□□□□□ -0.11
FOXN3-219ENST00000615335 PCNTO95613 3336 aa14.36□□□□□ -0.11
FOXN3-219ENST00000615335 TESPA1A2RU30 521 aaPredicted RBP14.36□□□□□ -0.11
FOXN3-219ENST00000615335 PES1O00541 588 aaKnown RBP14.36□□□□□ -0.11
FOXN3-219ENST00000615335 SNUPNO95149 360 aaKnown RBP14.36□□□□□ -0.11
FOXN3-219ENST00000615335 MYBL2P10244 700 aa14.36□□□□□ -0.11
FOXN3-219ENST00000615335 TRAPPC10P48553 1259 aa14.36□□□□□ -0.11
FOXN3-219ENST00000615335 APLP1P51693 650 aa14.36□□□□□ -0.11
FOXN3-219ENST00000615335 CDR1P51861 262 aa14.36□□□□□ -0.11
FOXN3-219ENST00000615335 AP3B2Q13367 1082 aa14.36□□□□□ -0.11
FOXN3-219ENST00000615335 RAD9BQ6WBX8 426 aa14.36□□□□□ -0.11
FOXN3-219ENST00000615335 CAPS2Q9BXY5 557 aa14.36□□□□□ -0.11
FOXN3-219ENST00000615335 TXNRD2Q9NNW7 524 aa14.36□□□□□ -0.11
FOXN3-219ENST00000615335 HOMER3Q9NSC5 361 aa14.36□□□□□ -0.11
FOXN3-219ENST00000615335 CTNND2Q9UQB3 1225 aa14.36□□□□□ -0.11
FOXN3-219ENST00000615335 ADGRG1Q9Y653 693 aa14.36□□□□□ -0.11
FOXN3-219ENST00000615335 FOSP01100 380 aaPredicted RBP14.35□□□□□ -0.11
FOXN3-219ENST00000615335 GCKP35557 465 aa14.35□□□□□ -0.11
FOXN3-219ENST00000615335 LETM2Q2VYF4 491 aa14.35□□□□□ -0.11
FOXN3-219ENST00000615335 NSMFQ6X4W1 530 aa14.35□□□□□ -0.11
FOXN3-219ENST00000615335 PYM1Q9BRP8 204 aaKnown RBP14.35□□□□□ -0.11
FOXN3-219ENST00000615335 ANO3Q9BYT9 981 aa14.35□□□□□ -0.11
FOXN3-219ENST00000615335 CREBZFQ9NS37 354 aa14.35□□□□□ -0.11
FOXN3-219ENST00000615335 RABGAP1Q9Y3P9 1069 aa14.35□□□□□ -0.11
FOXN3-219ENST00000615335 A0A0G2JMZ2 1700 aa14.35□□□□□ -0.11
FOXN3-219ENST00000615335 MFAP3LO75121 409 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms