RNA–Protein interactions for RNA: ENST00000614971.4

LTN1-207, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,756 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-207ENST00000614971 TNNC2P02585 160 aa4.13□□□□□ -1.75
LTN1-207ENST00000614971 PCP11498 1178 aaKnown RBP4.13□□□□□ -1.75
LTN1-207ENST00000614971 ZNF543Q08ER8 600 aa4.13□□□□□ -1.75
LTN1-207ENST00000614971 TSTA3Q13630 321 aaPredicted RBP4.13□□□□□ -1.75
LTN1-207ENST00000614971 GRM4Q14833 912 aa4.13□□□□□ -1.75
LTN1-207ENST00000614971 MAN2A1Q16706 1144 aa4.13□□□□□ -1.75
LTN1-207ENST00000614971 GJB7Q6PEY0 223 aa4.13□□□□□ -1.75
LTN1-207ENST00000614971 VSTM4Q8IW00 320 aa4.13□□□□□ -1.75
LTN1-207ENST00000614971 CCNYQ8ND76 341 aa4.13□□□□□ -1.75
LTN1-207ENST00000614971 DDX4Q9NQI0 724 aaKnown RBP4.13□□□□□ -1.75
LTN1-207ENST00000614971 PRDM5Q9NQX1 630 aaPredicted RBP4.13□□□□□ -1.75
LTN1-207ENST00000614971 DIP2BQ9P265 1576 aa4.13□□□□□ -1.75
LTN1-207ENST00000614971 HACL1Q9UJ83 578 aa4.13□□□□□ -1.75
LTN1-207ENST00000614971 ASCC3Q8N3C0 2202 aaKnown RBP4.13□□□□□ -1.75
LTN1-207ENST00000614971 CCDC78A2IDD5 438 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 WDR91A4D1P6 747 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 SPDYE16A6NNV3 312 aaPredicted RBP4.12□□□□□ -1.75
LTN1-207ENST00000614971 ZNF185O15231 689 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 MAP3K6O95382 1288 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 PRPHP41219 470 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 TRAPPC10P48553 1259 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 CASP4P49662 377 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 APBA1Q02410 837 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 TROAPQ12815 778 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 SPDYE2Q495Y8 402 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 TMEM270Q6UE05 265 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 MOB2Q70IA6 237 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 CATSPER4Q7RTX7 472 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 SGMS1Q86VZ5 419 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 DHX40Q8IX18 779 aaKnown RBP4.12□□□□□ -1.75
LTN1-207ENST00000614971 CCDC33Q8N5R6 958 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 TSR3Q9UJK0 312 aaKnown RBP4.12□□□□□ -1.75
LTN1-207ENST00000614971 FBXO2Q9UK22 296 aaPredicted RBP4.12□□□□□ -1.75
LTN1-207ENST00000614971 BRWD1Q9NSI6 2320 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 CCND2P30279 289 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 ERFP50548 548 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 KIF22Q14807 665 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 TWF2Q6IBS0 349 aaKnown RBP4.12□□□□□ -1.75
LTN1-207ENST00000614971 GALNT17Q6IS24 598 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 ALKBH5Q6P6C2 394 aaKnown RBP4.12□□□□□ -1.75
LTN1-207ENST00000614971 CDAN1Q8IWY9 1227 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 ENOX1Q8TC92 643 aaKnown RBP4.12□□□□□ -1.75
LTN1-207ENST00000614971 CCDC77Q9BR77 488 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 WDR11Q9BZH6 1224 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 MIS12Q9H081 205 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 JMJD4Q9H9V9 463 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 METTL14Q9HCE5 456 aaKnown RBP4.12□□□□□ -1.75
LTN1-207ENST00000614971 H7C0C1 242 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 ATMINO43313 823 aaPredicted RBP4.12□□□□□ -1.75
LTN1-207ENST00000614971 DKC1O60832 514 aaKnown RBP eCLIP4.12□□□□□ -1.75
LTN1-207ENST00000614971 NR3C1P04150 777 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 ATP5OP48047 213 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 PTK2Q05397 1052 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 DHX9Q08211 1270 aaKnown RBP4.12□□□□□ -1.75
LTN1-207ENST00000614971 NFRKBQ6P4R8 1299 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 KDELC2Q7Z4H8 507 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 ABI1Q8IZP0 508 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 TRIML1Q8N9V2 468 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 RMDN2Q96LZ7 410 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 HEXIM2Q96MH2 286 aaKnown RBP4.12□□□□□ -1.75
LTN1-207ENST00000614971 TSNARE1Q96NA8 513 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 WDR24Q96S15 920 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 C11orf70Q9BRQ4 267 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 SPON1Q9HCB6 807 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 MYOZ2Q9NPC6 264 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 FAM205AQ6ZU69 1335 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 LRRD1A4D1F6 860 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 SGK1O00141 431 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 NDC80O14777 642 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 CLDN3O15551 220 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 GRAP2O75791 330 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 UPP2O95045 317 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 TFRCP02786 760 aaKnown RBP4.12□□□□□ -1.75
LTN1-207ENST00000614971 ADRA2BP18089 450 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 AMHR2Q16671 573 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 MIS18BP1Q6P0N0 1132 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 MB21D1Q8N884 522 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 RNF149Q8NC42 400 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 MSANTD4Q8NCY6 345 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 OR6B3Q8NGW1 331 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.12□□□□□ -1.75
LTN1-207ENST00000614971 RSAD2Q8WXG1 361 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 FAM84AQ96KN4 292 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 SPATA33Q96N06 139 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 LBHD1Q9BQE6 289 aaPredicted RBP4.12□□□□□ -1.75
LTN1-207ENST00000614971 AP5M1Q9H0R1 490 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 HESX1Q9UBX0 185 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 ADD3Q9UEY8 706 aaKnown RBP4.12□□□□□ -1.75
LTN1-207ENST00000614971 DNAJC12Q9UKB3 198 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 MYMKA6NI61 221 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 OPA1O60313 960 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 MAPK4P31152 587 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 FXR1P51114 621 aaKnown RBP eCLIP4.12□□□□□ -1.75
LTN1-207ENST00000614971 USP14P54578 494 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 ST3GAL1Q11201 340 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 STRIP1Q5VSL9 837 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 PNMA8AQ86V59 439 aaPredicted RBP4.12□□□□□ -1.75
LTN1-207ENST00000614971 TTC30BQ8N4P2 665 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 TRIM58Q8NG06 486 aa4.12□□□□□ -1.75
LTN1-207ENST00000614971 HSPH1Q92598 858 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms