RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 SP2Q02086 613 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 CYP27A1Q02318 531 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 PSMD2Q13200 908 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 SEMA3FQ13275 785 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 TSR1Q2NL82 804 aaKnown RBP3.79□□□□□ -1.8
LIG4-205ENST00000614526 VWA3BQ502W6 1294 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 TMEM63BQ5T3F8 832 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 FAM102BQ5T8I3 360 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 LRRC55Q6ZSA7 311 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 C1orf186Q6ZWK4 172 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 VSIG10LQ86VR7 867 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 SYCP3Q8IZU3 236 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 NSUN6Q8TEA1 469 aaKnown RBP3.79□□□□□ -1.8
LIG4-205ENST00000614526 ELMO3Q96BJ8 720 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 ZNF668Q96K58 619 aaPredicted RBP3.79□□□□□ -1.8
LIG4-205ENST00000614526 ASCC2Q9H1I8 757 aaPredicted RBP3.79□□□□□ -1.8
LIG4-205ENST00000614526 TAF1DQ9H5J8 278 aaPredicted RBP3.79□□□□□ -1.8
LIG4-205ENST00000614526 GABBR1Q9UBS5 961 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 TRIM10Q9UDY6 481 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 COL4A3BPQ9Y5P4 624 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 ARFGEF1Q9Y6D6 1849 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 GLTPD2A6NH11 291 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 STX10O60499 249 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 URI1O94763 535 aaPredicted RBP3.79□□□□□ -1.8
LIG4-205ENST00000614526 TFRCP02786 760 aaKnown RBP3.79□□□□□ -1.8
LIG4-205ENST00000614526 P4HBP07237 508 aaKnown RBP3.79□□□□□ -1.8
LIG4-205ENST00000614526 CCND2P30279 289 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 YWHABP31946 246 aaKnown RBP3.79□□□□□ -1.8
LIG4-205ENST00000614526 QARSP47897 775 aaKnown RBP3.79□□□□□ -1.8
LIG4-205ENST00000614526 PEX3P56589 373 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 CHMP4BP1P59074 171 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 KNOP1Q1ED39 458 aaKnown RBP3.79□□□□□ -1.8
LIG4-205ENST00000614526 RRAGAQ7L523 313 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 DNAAF5Q86Y56 855 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 CNGA4Q8IV77 575 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 FAM114A1Q8IWE2 563 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 REXO1L1PQ8IX06 675 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 ANKRD13AQ8IZ07 590 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 CCDC112Q8NEF3 446 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 ZSWIM2Q8NEG5 633 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 ZBTB9Q96C00 473 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 SLC10A4Q96EP9 437 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 FAM84AQ96KN4 292 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 WDR24Q96S15 920 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 RIT2Q99578 217 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 KCTD10Q9H3F6 313 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 ZSWIM4Q9H7M6 989 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 RRAGCQ9HB90 399 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 PARVGQ9HBI0 331 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 TUFT1Q9NNX1 390 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.79□□□□□ -1.8
LIG4-205ENST00000614526 ASTN1O14525 1302 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 DNAH12Q6ZR08 3092 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 GOLGA8IPA6NC78 632 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 GOLGA8JA6NMD2 632 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 POTEB2H3BUK9 544 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 K7ENM7 598 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 CETN3O15182 167 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 FANCGO15287 622 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 SLC16A4O15374 487 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 AKAP3O75969 853 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 PNMA6AP0CW24 399 aaPredicted RBP3.79□□□□□ -1.8
LIG4-205ENST00000614526 MARK3P27448 753 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 GJA5P36382 358 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 RARRES1P49788 294 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 HERVK_113P62684 666 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 LRRC63Q05C16 580 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 GRM1Q13255 1194 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 MTERF2Q49AM1 385 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 NYAP1Q6ZVC0 841 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 CACNA2D4Q7Z3S7 1137 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 ERO1BQ86YB8 467 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 DAW1Q8N136 415 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 LRRN4CLQ8ND94 238 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 OR8K1Q8NGG5 319 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 KIF18AQ8NI77 898 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 RBM46Q8TBY0 533 aaKnown RBP3.79□□□□□ -1.8
LIG4-205ENST00000614526 CEP170P1Q96L14 293 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 MOV10L1Q9BXT6 1211 aaKnown RBP3.79□□□□□ -1.8
LIG4-205ENST00000614526 SPATC1LQ9H0A9 340 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 EFCC1Q9HA90 598 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 GUCA1BQ9UMX6 200 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 PPP2R3BQ9Y5P8 575 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 RPTORQ8N122 1335 aa3.79□□□□□ -1.8
LIG4-205ENST00000614526 TGFB1I1O43294 461 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 ZNF862O60290 1169 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 NR3C1P04150 777 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 TRIM49P0CI25 452 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 TRIM49CP0CI26 452 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 SLC9A1P19634 815 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 POLR2FP61218 127 aaKnown RBP3.78□□□□□ -1.8
LIG4-205ENST00000614526 KCNH2Q12809 1159 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 MAN2A1Q16706 1144 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 LY6KQ17RY6 165 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 ZCWPW2Q504Y3 356 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 GJC2Q5T442 439 aaPredicted RBP3.78□□□□□ -1.8
LIG4-205ENST00000614526 GJB7Q6PEY0 223 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 WDR59Q6PJI9 974 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 LBX2Q6XYB7 198 aa3.78□□□□□ -1.8
LIG4-205ENST00000614526 CCDC60Q8IWA6 550 aaPredicted RBP3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms