RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 CCDC155Q8N6L0 562 aa11.92□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 CAMKK2Q96RR4 588 aa11.92□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 CXorf56Q9H5V9 222 aa11.92□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 OLFML3Q9NRN5 406 aa11.92□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 SAR1BQ9Y6B6 198 aa11.92□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 SLC16A3O15427 465 aaKnown RBP11.92□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 MED24O75448 989 aa11.92□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 SYF2O95926 243 aaKnown RBP11.92□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 KRT14P02533 472 aa11.92□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 KLK7P49862 253 aa11.92□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 ARID5AQ03989 594 aa11.92□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 GIT2Q14161 759 aa11.92□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 SPDYE2Q495Y8 402 aa11.92□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 PDXDC1Q6P996 788 aa11.92□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 GBP6Q6ZN66 633 aa11.92□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 CATSPER3Q86XQ3 398 aa11.92□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 KSR1Q8IVT5 923 aa11.92□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 SCFD1Q8WVM8 642 aa11.92□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 PLCB1Q9NQ66 1216 aa11.92□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 MAP3K20Q9NYL2 800 aaKnown RBP11.92□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 AIPL1Q9NZN9 384 aa11.92□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 USP17L15C9J2P7 530 aa11.91□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 USP17L13C9JLJ4 530 aa11.91□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 USP17L11C9JVI0 530 aa11.91□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 USP17L18D6R9N7 530 aa11.91□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 USP17L22D6RA61 530 aa11.91□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 USP17L17D6RBQ6 530 aa11.91□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 USP17L19D6RCP7 530 aa11.91□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 USP17L20D6RJB6 530 aa11.91□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 PDXKO00764 312 aa11.91□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 NCK2O43639 380 aa11.91□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 MCM3P25205 808 aa11.91□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 GUCY1A3Q02108 690 aa11.91□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 USP17L24Q0WX57 530 aa11.91□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 USP17L6PQ6QN14 398 aa11.91□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 MAATS1Q7Z4T9 603 aa11.91□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 CCDC91Q7Z6B0 441 aa11.91□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 FAM160B2Q86V87 743 aa11.91□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 SLC5A5Q92911 643 aa11.91□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 ARL8AQ96BM9 186 aa11.91□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 MAF1Q9H063 256 aa11.91□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 ARHGEF10LQ9HCE6 1279 aa11.91□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 EIF3DO15371 548 aaKnown RBP eCLIP11.91□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 IFT88Q13099 833 aa11.91□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 NIPA1Q7RTP0 329 aa11.91□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 AGBL3Q8NEM8 1001 aa11.91□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 PRMT6Q96LA8 375 aaPredicted RBP11.91□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 HSD17B14Q9BPX1 270 aa11.91□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 GOPCQ9HD26 462 aa11.91□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 ARHGAP20Q9P2F6 1191 aa11.91□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 HPCAL4Q9UM19 191 aa11.91□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 KIAA1024Q9UPX6 916 aa11.91□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 BRCA1P38398 1863 aaKnown RBP11.91□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 A0A087WUV0 522 aaPredicted RBP11.91□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 GTPBP10A4D1E9 387 aaKnown RBP11.91□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 SKAP2O75563 359 aaPredicted RBP11.91□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 EYA4O95677 639 aa11.91□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 GAP43P17677 238 aa11.91□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 SCP2P22307 547 aa11.91□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 IRAK1P51617 712 aa11.91□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 JAG1P78504 1218 aa11.91□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 RRP1BQ14684 758 aaKnown RBP11.91□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 HGSNATQ68CP4 663 aa11.91□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 PRR12Q9ULL5 1215 aa11.91□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 PCDHAC2Q9Y5I4 1007 aa11.91□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 BUB1O43683 1085 aa11.9□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 NOL4O94818 638 aa11.9□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 CKAP4Q07065 602 aaKnown RBP11.9□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 ODF2Q5BJF6 829 aa11.9□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 EFCAB13Q8IY85 973 aa11.9□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 TRIM58Q8NG06 486 aa11.9□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 SH2D4AQ9H788 454 aa11.9□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 EMILIN3Q9NT22 766 aa11.9□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 DMGDHQ9UI17 866 aaKnown RBP11.9□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 FRMPD4Q14CM0 1322 aa11.9□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 COL4A5P29400 1685 aa11.9□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 FER1L6Q2WGJ9 1857 aa11.9□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 A0A1W2PRG0 241 aa11.9□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 ZSCAN5CA6NGD5 496 aaPredicted RBP11.9□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 FAM86B1E9PN63 330 aa11.9□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 ZNF263O14978 683 aa11.9□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 MSH4O15457 936 aa11.9□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 CLSTN1O94985 981 aa11.9□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 FAM86B2P0C5J1 330 aa11.9□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 PPP2R5AQ15172 486 aa11.9□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 AOC3Q16853 763 aa11.9□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 C10orf76Q5T2E6 689 aa11.9□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 DYMQ7RTS9 669 aa11.9□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 DNM3Q9UQ16 869 aa11.9□□□□□ -0.5
SENP3-EIF4A1-201ENST00000614237 RPTORQ8N122 1335 aa11.9□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 SPDYE3A6NKU9 549 aa11.9□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 PSMD10O75832 226 aa11.9□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 BCRP11274 1271 aa11.9□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 STAT2P52630 851 aa11.9□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 CCDC70Q6NSX1 233 aa11.9□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 CHURC1Q8WUH1 139 aa11.9□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 HPS3Q969F9 1004 aa11.9□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 LACRTQ9GZZ8 138 aa11.9□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 SEL1LQ9UBV2 794 aa11.9□□□□□ -0.51
SENP3-EIF4A1-201ENST00000614237 PARP14Q460N5 1801 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms