RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 PLA2G6O60733 806 aa10.97□□□□□ -0.65
GGA3-221ENST00000614198 RNF40O75150 1001 aa10.97□□□□□ -0.65
GGA3-221ENST00000614198 PRPF6O94906 941 aaKnown RBP10.97□□□□□ -0.65
GGA3-221ENST00000614198 SPATA31C1P0DKV0 1188 aa10.97□□□□□ -0.65
GGA3-221ENST00000614198 IDEP14735 1019 aa10.97□□□□□ -0.65
GGA3-221ENST00000614198 LIG3P49916 1009 aa10.97□□□□□ -0.65
GGA3-221ENST00000614198 VSNL1P62760 191 aa10.97□□□□□ -0.65
GGA3-221ENST00000614198 ITGB3BPQ13352 177 aaPredicted RBP10.97□□□□□ -0.65
GGA3-221ENST00000614198 ZNF569Q5MCW4 686 aa10.97□□□□□ -0.65
GGA3-221ENST00000614198 CCSER1Q9C0I3 900 aa10.97□□□□□ -0.65
GGA3-221ENST00000614198 KCNH7Q9NS40 1196 aa10.97□□□□□ -0.65
GGA3-221ENST00000614198 VAV3Q9UKW4 847 aa10.97□□□□□ -0.65
GGA3-221ENST00000614198 CTNND2Q9UQB3 1225 aa10.97□□□□□ -0.65
GGA3-221ENST00000614198 LRRIQ3A6PVS8 624 aaPredicted RBP10.96□□□□□ -0.65
GGA3-221ENST00000614198 PPP1R3GB7ZBB8 358 aa10.96□□□□□ -0.65
GGA3-221ENST00000614198 C19orf81C9J6K1 198 aa10.96□□□□□ -0.65
GGA3-221ENST00000614198 PES1O00541 588 aaKnown RBP10.96□□□□□ -0.65
GGA3-221ENST00000614198 KIF5CO60282 957 aa10.96□□□□□ -0.65
GGA3-221ENST00000614198 PRCPP42785 496 aa10.96□□□□□ -0.65
GGA3-221ENST00000614198 PGM5Q15124 567 aa10.96□□□□□ -0.65
GGA3-221ENST00000614198 CEP55Q53EZ4 464 aa10.96□□□□□ -0.65
GGA3-221ENST00000614198 MAEAQ7L5Y9 396 aa10.96□□□□□ -0.65
GGA3-221ENST00000614198 NCAPG2Q86XI2 1143 aa10.96□□□□□ -0.65
GGA3-221ENST00000614198 KBTBD4Q9NVX7 518 aa10.96□□□□□ -0.65
GGA3-221ENST00000614198 CYP3A7-CYP3A51PA0A087WV96 503 aa10.96□□□□□ -0.66
GGA3-221ENST00000614198 IQCA1LA6NCM1 817 aa10.96□□□□□ -0.66
GGA3-221ENST00000614198 SHOX2O60902 331 aaPredicted RBP10.96□□□□□ -0.66
GGA3-221ENST00000614198 CYP3A7P24462 503 aa10.96□□□□□ -0.66
GGA3-221ENST00000614198 NF2P35240 595 aa10.96□□□□□ -0.66
GGA3-221ENST00000614198 TMEM266Q2M3C6 531 aa10.96□□□□□ -0.66
GGA3-221ENST00000614198 NT5DC1Q5TFE4 455 aa10.96□□□□□ -0.66
GGA3-221ENST00000614198 KRT79Q5XKE5 535 aa10.96□□□□□ -0.66
GGA3-221ENST00000614198 TPH2Q8IWU9 490 aa10.96□□□□□ -0.66
GGA3-221ENST00000614198 TC2NQ8N9U0 490 aa10.96□□□□□ -0.66
GGA3-221ENST00000614198 SLC10A4Q96EP9 437 aa10.96□□□□□ -0.66
GGA3-221ENST00000614198 CDK5RAP3Q96JB5 506 aa10.96□□□□□ -0.66
GGA3-221ENST00000614198 ZNF577Q9BSK1 485 aa10.96□□□□□ -0.66
GGA3-221ENST00000614198 UNC45AQ9H3U1 944 aa10.96□□□□□ -0.66
GGA3-221ENST00000614198 LAD1O00515 517 aa10.96□□□□□ -0.66
GGA3-221ENST00000614198 RGS20O76081 388 aa10.96□□□□□ -0.66
GGA3-221ENST00000614198 ASIC1P78348 528 aa10.96□□□□□ -0.66
GGA3-221ENST00000614198 LRCH2Q5VUJ6 765 aa10.96□□□□□ -0.66
GGA3-221ENST00000614198 ARHGEF16Q5VV41 709 aa10.96□□□□□ -0.66
GGA3-221ENST00000614198 ERO1BQ86YB8 467 aa10.96□□□□□ -0.66
GGA3-221ENST00000614198 EGFL6Q8IUX8 553 aa10.96□□□□□ -0.66
GGA3-221ENST00000614198 DYDC2Q96IM9 177 aa10.96□□□□□ -0.66
GGA3-221ENST00000614198 HINFPQ9BQA5 517 aa10.96□□□□□ -0.66
GGA3-221ENST00000614198 TRIM9Q9C026 710 aa10.96□□□□□ -0.66
GGA3-221ENST00000614198 ZHX3Q9H4I2 956 aa10.96□□□□□ -0.66
GGA3-221ENST00000614198 FAM169AQ9Y6X4 670 aa10.96□□□□□ -0.66
GGA3-221ENST00000614198 A0A0G2JLL6 359 aaPredicted RBP10.95□□□□□ -0.66
GGA3-221ENST00000614198 RSPH10B2B2RC85 870 aa10.95□□□□□ -0.66
GGA3-221ENST00000614198 SYF2O95926 243 aaKnown RBP10.95□□□□□ -0.66
GGA3-221ENST00000614198 RSPH10BP0C881 870 aa10.95□□□□□ -0.66
GGA3-221ENST00000614198 OTOP1Q7RTM1 612 aa10.95□□□□□ -0.66
GGA3-221ENST00000614198 PRRT2Q7Z6L0 340 aaPredicted RBP10.95□□□□□ -0.66
GGA3-221ENST00000614198 PPFIBP1Q86W92 1011 aa10.95□□□□□ -0.66
GGA3-221ENST00000614198 RNF217Q8TC41 542 aa10.95□□□□□ -0.66
GGA3-221ENST00000614198 MRPL44Q9H9J2 332 aaKnown RBP10.95□□□□□ -0.66
GGA3-221ENST00000614198 INTS13Q9NVM9 706 aa10.95□□□□□ -0.66
GGA3-221ENST00000614198 ADAMTS5Q9UNA0 930 aa10.95□□□□□ -0.66
GGA3-221ENST00000614198 NFE2L3Q9Y4A8 694 aa10.95□□□□□ -0.66
GGA3-221ENST00000614198 SPDYE5A6NIY4 337 aa10.95□□□□□ -0.66
GGA3-221ENST00000614198 TULP1O00294 542 aaPredicted RBP10.95□□□□□ -0.66
GGA3-221ENST00000614198 IPO5O00410 1097 aaKnown RBP10.95□□□□□ -0.66
GGA3-221ENST00000614198 EBAG9O00559 213 aa10.95□□□□□ -0.66
GGA3-221ENST00000614198 TFRCP02786 760 aaKnown RBP10.95□□□□□ -0.66
GGA3-221ENST00000614198 MTF1Q14872 753 aa10.95□□□□□ -0.66
GGA3-221ENST00000614198 Q4G0T1 1027 aa10.95□□□□□ -0.66
GGA3-221ENST00000614198 FBXW10Q5XX13 1052 aa10.95□□□□□ -0.66
GGA3-221ENST00000614198 GPAT2Q6NUI2 795 aa10.95□□□□□ -0.66
GGA3-221ENST00000614198 ZC3H15Q8WU90 426 aaKnown RBP10.95□□□□□ -0.66
GGA3-221ENST00000614198 LARP4BQ92615 738 aaKnown RBP10.95□□□□□ -0.66
GGA3-221ENST00000614198 DDX12PQ92771 950 aa10.95□□□□□ -0.66
GGA3-221ENST00000614198 CALML4Q96GE6 196 aa10.95□□□□□ -0.66
GGA3-221ENST00000614198 C12orf42Q96LP6 360 aa10.95□□□□□ -0.66
GGA3-221ENST00000614198 MBOAT7Q96N66 472 aa10.95□□□□□ -0.66
GGA3-221ENST00000614198 PORCNQ9H237 461 aa10.95□□□□□ -0.66
GGA3-221ENST00000614198 PXMP2Q9NR77 195 aa10.95□□□□□ -0.66
GGA3-221ENST00000614198 CYP39A1Q9NYL5 469 aa10.95□□□□□ -0.66
GGA3-221ENST00000614198 RBPJLQ9UBG7 517 aa10.95□□□□□ -0.66
GGA3-221ENST00000614198 CNMDO75829 334 aa10.94□□□□□ -0.66
GGA3-221ENST00000614198 FOSP01100 380 aaPredicted RBP10.94□□□□□ -0.66
GGA3-221ENST00000614198 CCDC175P0C221 793 aa10.94□□□□□ -0.66
GGA3-221ENST00000614198 HERVK_113P62684 666 aa10.94□□□□□ -0.66
GGA3-221ENST00000614198 ARSHQ5FYA8 562 aa10.94□□□□□ -0.66
GGA3-221ENST00000614198 WDR93Q6P2C0 686 aa10.94□□□□□ -0.66
GGA3-221ENST00000614198 PNMA8AQ86V59 439 aaPredicted RBP10.94□□□□□ -0.66
GGA3-221ENST00000614198 EIF2AK1Q9BQI3 630 aaKnown RBP10.94□□□□□ -0.66
GGA3-221ENST00000614198 H0YHG0 523 aa10.94□□□□□ -0.66
GGA3-221ENST00000614198 GTPBP6O43824 516 aaPredicted RBP10.94□□□□□ -0.66
GGA3-221ENST00000614198 SP2Q02086 613 aa10.94□□□□□ -0.66
GGA3-221ENST00000614198 PPATQ06203 517 aa10.94□□□□□ -0.66
GGA3-221ENST00000614198 TKFCQ3LXA3 575 aa10.94□□□□□ -0.66
GGA3-221ENST00000614198 KSR1Q8IVT5 923 aa10.94□□□□□ -0.66
GGA3-221ENST00000614198 ANKRD35Q8N283 1001 aa10.94□□□□□ -0.66
GGA3-221ENST00000614198 RAD54LQ92698 747 aa10.94□□□□□ -0.66
GGA3-221ENST00000614198 PTPN18Q99952 460 aa10.94□□□□□ -0.66
GGA3-221ENST00000614198 PDCD2LQ9BRP1 358 aa10.94□□□□□ -0.66
GGA3-221ENST00000614198 TEX13BQ9BXU2 312 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms