RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 TMPRSS15P98073 1019 aa9.39□□□□□ -0.91
TTC28-208ENST00000612946 FKBP3Q00688 224 aaKnown RBP9.39□□□□□ -0.91
TTC28-208ENST00000612946 TMC5Q6UXY8 1006 aa9.39□□□□□ -0.91
TTC28-208ENST00000612946 TRMT44Q8IYL2 757 aaKnown RBP9.39□□□□□ -0.91
TTC28-208ENST00000612946 MIEF2Q96C03 454 aa9.39□□□□□ -0.91
TTC28-208ENST00000612946 CYTH2Q99418 400 aa9.39□□□□□ -0.91
TTC28-208ENST00000612946 MLH1P40692 756 aa9.39□□□□□ -0.91
TTC28-208ENST00000612946 DPCR1Q3MIW9 517 aa9.39□□□□□ -0.91
TTC28-208ENST00000612946 CALML6Q8TD86 181 aa9.39□□□□□ -0.91
TTC28-208ENST00000612946 OLFM1Q99784 485 aa9.39□□□□□ -0.91
TTC28-208ENST00000612946 KIF17Q9P2E2 1029 aa9.39□□□□□ -0.91
TTC28-208ENST00000612946 MYOM2P54296 1465 aa9.39□□□□□ -0.91
TTC28-208ENST00000612946 DDAH1O94760 285 aa9.39□□□□□ -0.91
TTC28-208ENST00000612946 IRAK1P51617 712 aa9.39□□□□□ -0.91
TTC28-208ENST00000612946 WLSQ5T9L3 541 aa9.39□□□□□ -0.91
TTC28-208ENST00000612946 TTC13Q8NBP0 860 aa9.39□□□□□ -0.91
TTC28-208ENST00000612946 APOL4Q9BPW4 351 aa9.39□□□□□ -0.91
TTC28-208ENST00000612946 TMCO1Q9UM00 188 aa9.39□□□□□ -0.91
TTC28-208ENST00000612946 ADGRL3Q9HAR2 1447 aa9.39□□□□□ -0.91
TTC28-208ENST00000612946 SOWAHDA6NJG2 315 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 LGALS16A8MUM7 142 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 MRRFQ96E11 262 aaKnown RBP9.38□□□□□ -0.91
TTC28-208ENST00000612946 NAF1Q96HR8 494 aaKnown RBP9.38□□□□□ -0.91
TTC28-208ENST00000612946 PRDM4Q9UKN5 801 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 L3MBTL1Q9Y468 752 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 WDR19Q8NEZ3 1342 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 IFNA8P32881 189 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 PURAQ00577 322 aaKnown RBP9.38□□□□□ -0.91
TTC28-208ENST00000612946 BNC1Q01954 994 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 SIX6OS1Q8N1H7 587 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 EPC1Q9H2F5 836 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 CTNNAL1Q9UBT7 734 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 COMMD3-BMI1R4GMX3 469 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 LAMC3Q9Y6N6 1575 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 H3BRJ5 948 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 CDH16O75309 829 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 H2AFXP16104 143 aaPredicted RBP9.38□□□□□ -0.91
TTC28-208ENST00000612946 CEP78Q5JTW2 689 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 LDHAL6AQ6ZMR3 332 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 KRT27Q7Z3Y8 459 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 PRUNE1Q86TP1 453 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 TRIM59Q8IWR1 403 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 MAGEC3Q8TD91 643 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 A1CFQ9NQ94 594 aaKnown RBP9.38□□□□□ -0.91
TTC28-208ENST00000612946 BAZ2BQ9UIF8 2168 aaKnown RBP9.38□□□□□ -0.91
TTC28-208ENST00000612946 DNAJC6O75061 913 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 RHOBTB1O94844 696 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 R3HDM1Q15032 1099 aaKnown RBP9.38□□□□□ -0.91
TTC28-208ENST00000612946 ARL6IP4Q66PJ3 421 aaKnown RBP9.38□□□□□ -0.91
TTC28-208ENST00000612946 IRGCQ6NXR0 463 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 OLFML1Q6UWY5 402 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 TXNDC2Q86VQ3 553 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 JADE3Q92613 823 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 USP28Q96RU2 1077 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 DMAP1Q9NPF5 467 aaPredicted RBP9.38□□□□□ -0.91
TTC28-208ENST00000612946 C15orf41Q9Y2V0 281 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 COL4A3BPQ9Y5P4 624 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 PIK3R2O00459 728 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 ADCK5Q3MIX3 580 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 ARHGAP27Q6ZUM4 889 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 IKBIPQ70UQ0 350 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 ITFG2Q969R8 447 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 PPP4R4Q6NUP7 873 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 FLT4P35916 1363 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 POC1B-GALNT4F8VUJ3 575 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 SPAG6O75602 509 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 ATF7P17544 494 aaPredicted RBP9.38□□□□□ -0.91
TTC28-208ENST00000612946 DDX5P17844 614 aaKnown RBP9.38□□□□□ -0.91
TTC28-208ENST00000612946 SOX6P35712 828 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 MFAP3P55082 362 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 TUBA1BP68363 451 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 TAB1Q15750 504 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 TUBA1AQ71U36 451 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 ZNF354CQ86Y25 554 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 SPDYE1Q8NFV5 336 aaPredicted RBP9.38□□□□□ -0.91
TTC28-208ENST00000612946 APBB2Q92870 758 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 ITIH6Q6UXX5 1313 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 ARHGEF35A5YM69 484 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 PMS2P54278 862 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 TESK2Q96S53 571 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 AIPL1Q9NZN9 384 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 TOPBP1Q92547 1522 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 A0A1W2PQC6 194 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 BUB1O43683 1085 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 TJP3O95049 919 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 WASHC2DQ5SRD0 308 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 RBM41Q96IZ5 413 aaKnown RBP9.38□□□□□ -0.91
TTC28-208ENST00000612946 BEGAINQ9BUH8 593 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 POLKQ9UBT6 870 aa9.38□□□□□ -0.91
TTC28-208ENST00000612946 PTGISQ16647 500 aa9.37□□□□□ -0.91
TTC28-208ENST00000612946 KLHL12Q53G59 568 aa9.37□□□□□ -0.91
TTC28-208ENST00000612946 GFPT2O94808 682 aa9.37□□□□□ -0.91
TTC28-208ENST00000612946 TSPYL6Q8N831 410 aa9.37□□□□□ -0.91
TTC28-208ENST00000612946 RIN3Q8TB24 985 aa9.37□□□□□ -0.91
TTC28-208ENST00000612946 NUDT16Q96DE0 195 aaKnown RBP9.37□□□□□ -0.91
TTC28-208ENST00000612946 SNF8Q96H20 258 aa9.37□□□□□ -0.91
TTC28-208ENST00000612946 TMEM51Q9NW97 253 aa9.37□□□□□ -0.91
TTC28-208ENST00000612946 EIF4G3O43432 1585 aaKnown RBP9.37□□□□□ -0.91
TTC28-208ENST00000612946 CYP7A1P22680 504 aa9.37□□□□□ -0.91
TTC28-208ENST00000612946 ABCE1P61221 599 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms