RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 TACO1Q9BSH4 297 aaKnown RBP11.83□□□□□ -0.52
FAM3A-221ENST00000612856 NRBP2Q9NSY0 501 aa11.83□□□□□ -0.52
FAM3A-221ENST00000612856 GPRC5DQ9NZD1 345 aa11.83□□□□□ -0.52
FAM3A-221ENST00000612856 NXF1Q9UBU9 619 aaKnown RBP11.83□□□□□ -0.52
FAM3A-221ENST00000612856 SUGT1Q9Y2Z0 365 aa11.83□□□□□ -0.52
FAM3A-221ENST00000612856 ZNF541Q9H0D2 1346 aa11.82□□□□□ -0.52
FAM3A-221ENST00000612856 GGPS1O95749 300 aa11.82□□□□□ -0.52
FAM3A-221ENST00000612856 NEFHP12036 1026 aa11.82□□□□□ -0.52
FAM3A-221ENST00000612856 NTRK3Q16288 839 aa11.82□□□□□ -0.52
FAM3A-221ENST00000612856 SLFN12Q8IYM2 578 aa11.82□□□□□ -0.52
FAM3A-221ENST00000612856 SPATA33Q96N06 139 aa11.82□□□□□ -0.52
FAM3A-221ENST00000612856 NUB1Q9Y5A7 615 aa11.82□□□□□ -0.52
FAM3A-221ENST00000612856 E7EVH7 732 aa11.82□□□□□ -0.52
FAM3A-221ENST00000612856 IL1R1P14778 569 aa11.82□□□□□ -0.52
FAM3A-221ENST00000612856 ABCB4P21439 1286 aa11.82□□□□□ -0.52
FAM3A-221ENST00000612856 CMA1P23946 247 aa11.82□□□□□ -0.52
FAM3A-221ENST00000612856 TROAPQ12815 778 aa11.82□□□□□ -0.52
FAM3A-221ENST00000612856 ADAM9Q13443 819 aa11.82□□□□□ -0.52
FAM3A-221ENST00000612856 ZNF394Q53GI3 561 aa11.82□□□□□ -0.52
FAM3A-221ENST00000612856 SGMS1Q86VZ5 419 aa11.82□□□□□ -0.52
FAM3A-221ENST00000612856 CCDC50Q8IVM0 306 aa11.82□□□□□ -0.52
FAM3A-221ENST00000612856 DCAF4Q8WV16 495 aa11.82□□□□□ -0.52
FAM3A-221ENST00000612856 ATP6V0A1Q93050 837 aa11.82□□□□□ -0.52
FAM3A-221ENST00000612856 SALL1Q9NSC2 1324 aa11.82□□□□□ -0.52
FAM3A-221ENST00000612856 LRRN2O75325 713 aa11.82□□□□□ -0.52
FAM3A-221ENST00000612856 UPP2O95045 317 aa11.82□□□□□ -0.52
FAM3A-221ENST00000612856 SATB1Q01826 763 aa11.82□□□□□ -0.52
FAM3A-221ENST00000612856 SPAG1Q07617 926 aa11.82□□□□□ -0.52
FAM3A-221ENST00000612856 DMP1Q13316 513 aaPredicted RBP11.82□□□□□ -0.52
FAM3A-221ENST00000612856 EARS2Q5JPH6 523 aaKnown RBP11.82□□□□□ -0.52
FAM3A-221ENST00000612856 WDR44Q5JSH3 913 aa11.82□□□□□ -0.52
FAM3A-221ENST00000612856 TAAR1Q96RJ0 339 aa11.82□□□□□ -0.52
FAM3A-221ENST00000612856 FAM53CQ9NYF3 392 aa11.82□□□□□ -0.52
FAM3A-221ENST00000612856 HDAC6Q9UBN7 1215 aa11.82□□□□□ -0.52
FAM3A-221ENST00000612856 RGS17Q9UGC6 210 aaPredicted RBP11.82□□□□□ -0.52
FAM3A-221ENST00000612856 TOGARAM1Q9Y4F4 1720 aa11.82□□□□□ -0.52
FAM3A-221ENST00000612856 RPN1P04843 607 aaKnown RBP11.81□□□□□ -0.52
FAM3A-221ENST00000612856 RPS12P25398 132 aaKnown RBP11.81□□□□□ -0.52
FAM3A-221ENST00000612856 CASP14P31944 242 aa11.81□□□□□ -0.52
FAM3A-221ENST00000612856 HTRA3P83110 453 aa11.81□□□□□ -0.52
FAM3A-221ENST00000612856 FASTKD5Q7L8L6 764 aaKnown RBP11.81□□□□□ -0.52
FAM3A-221ENST00000612856 ZBTB8OSQ8IWT0 167 aa11.81□□□□□ -0.52
FAM3A-221ENST00000612856 DISC1Q9NRI5 854 aa11.81□□□□□ -0.52
FAM3A-221ENST00000612856 BARHL2Q9NY43 387 aa11.81□□□□□ -0.52
FAM3A-221ENST00000612856 FAM198AQ9UFP1 575 aa11.81□□□□□ -0.52
FAM3A-221ENST00000612856 USTQ9Y2C2 406 aa11.81□□□□□ -0.52
FAM3A-221ENST00000612856 TAF1P21675 1872 aa11.81□□□□□ -0.52
FAM3A-221ENST00000612856 NR3C2P08235 984 aa11.81□□□□□ -0.52
FAM3A-221ENST00000612856 PLA2G4BP0C869 781 aa11.81□□□□□ -0.52
FAM3A-221ENST00000612856 PAX7P23759 505 aa11.81□□□□□ -0.52
FAM3A-221ENST00000612856 PSEN1P49768 467 aa11.81□□□□□ -0.52
FAM3A-221ENST00000612856 YARSP54577 528 aaKnown RBP11.81□□□□□ -0.52
FAM3A-221ENST00000612856 SCYL3Q8IZE3 742 aa11.81□□□□□ -0.52
FAM3A-221ENST00000612856 GPC2Q8N158 579 aa11.81□□□□□ -0.52
FAM3A-221ENST00000612856 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.81□□□□□ -0.52
FAM3A-221ENST00000612856 C7orf31Q8N865 590 aa11.81□□□□□ -0.52
FAM3A-221ENST00000612856 CYP2W1Q8TAV3 490 aa11.81□□□□□ -0.52
FAM3A-221ENST00000612856 A0A0U1RQJ8 604 aa11.81□□□□□ -0.52
FAM3A-221ENST00000612856 GSTTP1A0A1W2PQM5 241 aa11.81□□□□□ -0.52
FAM3A-221ENST00000612856 OPA1O60313 960 aa11.81□□□□□ -0.52
FAM3A-221ENST00000612856 DKC1O60832 514 aaKnown RBP eCLIP11.81□□□□□ -0.52
FAM3A-221ENST00000612856 VCAM1P19320 739 aa11.81□□□□□ -0.52
FAM3A-221ENST00000612856 NPEPPSP55786 919 aa11.81□□□□□ -0.52
FAM3A-221ENST00000612856 PPP4CP60510 307 aa11.81□□□□□ -0.52
FAM3A-221ENST00000612856 RNASELQ05823 741 aaKnown RBP11.81□□□□□ -0.52
FAM3A-221ENST00000612856 RBL2Q08999 1139 aa11.81□□□□□ -0.52
FAM3A-221ENST00000612856 GNASQ5JWF2 1037 aa11.81□□□□□ -0.52
FAM3A-221ENST00000612856 ATL3Q6DD88 541 aa11.81□□□□□ -0.52
FAM3A-221ENST00000612856 RRAGAQ7L523 313 aa11.81□□□□□ -0.52
FAM3A-221ENST00000612856 RHPN2Q8IUC4 686 aa11.81□□□□□ -0.52
FAM3A-221ENST00000612856 KMT5AQ9NQR1 393 aa11.81□□□□□ -0.52
FAM3A-221ENST00000612856 L1RE1Q9UN81 338 aa11.81□□□□□ -0.52
FAM3A-221ENST00000612856 NPHP3-ACAD11A0A0J9YXS1 232 aa11.8□□□□□ -0.52
FAM3A-221ENST00000612856 ABI1Q8IZP0 508 aa11.8□□□□□ -0.52
FAM3A-221ENST00000612856 PHLPP1O60346 1717 aa11.8□□□□□ -0.52
FAM3A-221ENST00000612856 NR2F2P24468 414 aa11.8□□□□□ -0.52
FAM3A-221ENST00000612856 ELF1P32519 619 aa11.8□□□□□ -0.52
FAM3A-221ENST00000612856 SHMT1P34896 483 aa11.8□□□□□ -0.52
FAM3A-221ENST00000612856 SLC7A5Q01650 507 aa11.8□□□□□ -0.52
FAM3A-221ENST00000612856 PLA2G4FQ68DD2 849 aa11.8□□□□□ -0.52
FAM3A-221ENST00000612856 SCARA5Q6ZMJ2 495 aa11.8□□□□□ -0.52
FAM3A-221ENST00000612856 FMNL3Q8IVF7 1028 aa11.8□□□□□ -0.52
FAM3A-221ENST00000612856 ADPGKQ9BRR6 497 aa11.8□□□□□ -0.52
FAM3A-221ENST00000612856 MYO1AQ9UBC5 1043 aa11.8□□□□□ -0.52
FAM3A-221ENST00000612856 CTNND1O60716 968 aaKnown RBP11.8□□□□□ -0.52
FAM3A-221ENST00000612856 DESP17661 470 aa11.8□□□□□ -0.52
FAM3A-221ENST00000612856 CUL4BQ13620 913 aa11.8□□□□□ -0.52
FAM3A-221ENST00000612856 LMBRD2Q68DH5 695 aaPredicted RBP11.8□□□□□ -0.52
FAM3A-221ENST00000612856 RBM43Q6ZSC3 357 aaKnown RBP11.8□□□□□ -0.52
FAM3A-221ENST00000612856 RSRC1Q96IZ7 334 aaKnown RBP11.8□□□□□ -0.52
FAM3A-221ENST00000612856 CCDC113Q9H0I3 377 aa11.8□□□□□ -0.52
FAM3A-221ENST00000612856 IL17RBQ9NRM6 502 aa11.8□□□□□ -0.52
FAM3A-221ENST00000612856 COL4A3BPQ9Y5P4 624 aa11.8□□□□□ -0.52
FAM3A-221ENST00000612856 MYH14Q7Z406 1995 aaKnown RBP11.79□□□□□ -0.52
FAM3A-221ENST00000612856 NFKBIEO00221 500 aa11.79□□□□□ -0.52
FAM3A-221ENST00000612856 SLC16A4O15374 487 aa11.79□□□□□ -0.52
FAM3A-221ENST00000612856 KIF1CO43896 1103 aaKnown RBP11.79□□□□□ -0.52
FAM3A-221ENST00000612856 CD58P19256 250 aa11.79□□□□□ -0.52
FAM3A-221ENST00000612856 COPB2P35606 906 aa11.79□□□□□ -0.52
FAM3A-221ENST00000612856 BACE1P56817 501 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms