RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 POLD4Q9HCU8 107 aa13.45□□□□□ -0.26
CDH1-212ENST00000611625 SNX24Q9Y343 169 aa13.45□□□□□ -0.26
CDH1-212ENST00000611625 TNFAIP1Q13829 316 aa13.45□□□□□ -0.26
CDH1-212ENST00000611625 HADHQ16836 314 aaKnown RBP13.45□□□□□ -0.26
CDH1-212ENST00000611625 QRICH1Q2TAL8 776 aa13.45□□□□□ -0.26
CDH1-212ENST00000611625 CCNI2Q6ZMN8 369 aaPredicted RBP13.45□□□□□ -0.26
CDH1-212ENST00000611625 ADGRF4Q8IZF3 695 aa13.45□□□□□ -0.26
CDH1-212ENST00000611625 PPP1R12CQ9BZL4 782 aa13.45□□□□□ -0.26
CDH1-212ENST00000611625 SSU72P8A0A1W2PR75 194 aa13.45□□□□□ -0.26
CDH1-212ENST00000611625 POC1B-GALNT4F8VUJ3 575 aa13.45□□□□□ -0.26
CDH1-212ENST00000611625 HSPA1LP34931 641 aa13.45□□□□□ -0.26
CDH1-212ENST00000611625 CACNB3P54284 484 aa13.45□□□□□ -0.26
CDH1-212ENST00000611625 IL9RQ01113 521 aa13.45□□□□□ -0.26
CDH1-212ENST00000611625 LMNB2Q03252 620 aa13.45□□□□□ -0.26
CDH1-212ENST00000611625 TAF1DQ9H5J8 278 aaPredicted RBP13.45□□□□□ -0.26
CDH1-212ENST00000611625 PNMA2Q9UL42 364 aa13.45□□□□□ -0.26
CDH1-212ENST00000611625 DIS3Q9Y2L1 958 aaKnown RBP13.45□□□□□ -0.26
CDH1-212ENST00000611625 COMMD10Q9Y6G5 202 aa13.45□□□□□ -0.26
CDH1-212ENST00000611625 STXBP3O00186 592 aa13.45□□□□□ -0.26
CDH1-212ENST00000611625 ERVK-24P63145 666 aa13.45□□□□□ -0.26
CDH1-212ENST00000611625 CYP4F22Q6NT55 531 aa13.45□□□□□ -0.26
CDH1-212ENST00000611625 FLAD1Q8NFF5 587 aa13.45□□□□□ -0.26
CDH1-212ENST00000611625 RUBCNQ92622 972 aa13.45□□□□□ -0.26
CDH1-212ENST00000611625 ATP6V0A1Q93050 837 aa13.45□□□□□ -0.26
CDH1-212ENST00000611625 SUGCTQ9HAC7 445 aa13.45□□□□□ -0.26
CDH1-212ENST00000611625 KMT5AQ9NQR1 393 aa13.45□□□□□ -0.26
CDH1-212ENST00000611625 MIF4GDA9UHW6 222 aaKnown RBP13.44□□□□□ -0.26
CDH1-212ENST00000611625 KCNQ2O43526 872 aa13.44□□□□□ -0.26
CDH1-212ENST00000611625 MYCNP04198 464 aaPredicted RBP13.44□□□□□ -0.26
CDH1-212ENST00000611625 AKR1B1P15121 316 aa13.44□□□□□ -0.26
CDH1-212ENST00000611625 LRRC8CQ8TDW0 803 aa13.44□□□□□ -0.26
CDH1-212ENST00000611625 GLG1Q92896 1179 aa13.44□□□□□ -0.26
CDH1-212ENST00000611625 TBC1D31Q96DN5 1066 aa13.44□□□□□ -0.26
CDH1-212ENST00000611625 MYCBPQ99417 103 aaPredicted RBP13.44□□□□□ -0.26
CDH1-212ENST00000611625 VIRMAQ69YN4 1812 aaKnown RBP13.44□□□□□ -0.26
CDH1-212ENST00000611625 SORBS3O60504 671 aa13.44□□□□□ -0.26
CDH1-212ENST00000611625 STAT3P40763 770 aa13.44□□□□□ -0.26
CDH1-212ENST00000611625 POLGP54098 1239 aaPredicted RBP13.44□□□□□ -0.26
CDH1-212ENST00000611625 MMS22LQ6ZRQ5 1243 aa13.44□□□□□ -0.26
CDH1-212ENST00000611625 SRLQ86TD4 932 aa13.44□□□□□ -0.26
CDH1-212ENST00000611625 HOOK2Q96ED9 719 aa13.44□□□□□ -0.26
CDH1-212ENST00000611625 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.44□□□□□ -0.26
CDH1-212ENST00000611625 FUT8Q9BYC5 575 aa13.44□□□□□ -0.26
CDH1-212ENST00000611625 ANAPC5Q9UJX4 755 aa13.44□□□□□ -0.26
CDH1-212ENST00000611625 CCDC160A6NGH7 325 aa13.44□□□□□ -0.26
CDH1-212ENST00000611625 MYMKA6NI61 221 aa13.44□□□□□ -0.26
CDH1-212ENST00000611625 STAM2O75886 525 aa13.44□□□□□ -0.26
CDH1-212ENST00000611625 APBA3O96018 575 aa13.44□□□□□ -0.26
CDH1-212ENST00000611625 SNX16P57768 344 aa13.44□□□□□ -0.26
CDH1-212ENST00000611625 ADCY2Q08462 1091 aa13.44□□□□□ -0.26
CDH1-212ENST00000611625 ALCAMQ13740 583 aa13.44□□□□□ -0.26
CDH1-212ENST00000611625 APBB1IPQ7Z5R6 666 aaPredicted RBP13.44□□□□□ -0.26
CDH1-212ENST00000611625 KSR1Q8IVT5 923 aa13.44□□□□□ -0.26
CDH1-212ENST00000611625 ANKFY1Q9P2R3 1169 aa13.44□□□□□ -0.26
CDH1-212ENST00000611625 PCDHB4Q9Y5E5 795 aa13.44□□□□□ -0.26
CDH1-212ENST00000611625 SYNGAP1Q96PV0 1343 aa13.44□□□□□ -0.26
CDH1-212ENST00000611625 GH2P01242 217 aa13.44□□□□□ -0.26
CDH1-212ENST00000611625 ZNF18P17022 549 aa13.44□□□□□ -0.26
CDH1-212ENST00000611625 ADCY1Q08828 1119 aa13.44□□□□□ -0.26
CDH1-212ENST00000611625 C6orf118Q5T5N4 469 aa13.44□□□□□ -0.26
CDH1-212ENST00000611625 MICAL1Q8TDZ2 1067 aa13.44□□□□□ -0.26
CDH1-212ENST00000611625 RIN2Q8WYP3 895 aaPredicted RBP13.44□□□□□ -0.26
CDH1-212ENST00000611625 TRPC6Q9Y210 931 aa13.44□□□□□ -0.26
CDH1-212ENST00000611625 NWD1Q149M9 1564 aa13.43□□□□□ -0.26
CDH1-212ENST00000611625 FAM196BA6NMK8 535 aa13.43□□□□□ -0.26
CDH1-212ENST00000611625 POLR2BP30876 1174 aaKnown RBP13.43□□□□□ -0.26
CDH1-212ENST00000611625 E2F5Q15329 346 aa13.43□□□□□ -0.26
CDH1-212ENST00000611625 CCDC38Q502W7 563 aa13.43□□□□□ -0.26
CDH1-212ENST00000611625 CCDC110Q8TBZ0 833 aa13.43□□□□□ -0.26
CDH1-212ENST00000611625 PSD3Q9NYI0 1048 aa13.43□□□□□ -0.26
CDH1-212ENST00000611625 HPCAL4Q9UM19 191 aa13.43□□□□□ -0.26
CDH1-212ENST00000611625 RWDD2BP57060 319 aa13.43□□□□□ -0.26
CDH1-212ENST00000611625 E2F4Q16254 413 aa13.43□□□□□ -0.26
CDH1-212ENST00000611625 ANKRD35Q8N283 1001 aa13.43□□□□□ -0.26
CDH1-212ENST00000611625 ATP6V1G3Q96LB4 118 aa13.43□□□□□ -0.26
CDH1-212ENST00000611625 PNKPQ96T60 521 aa13.43□□□□□ -0.26
CDH1-212ENST00000611625 ANKRD26Q9UPS8 1709 aa13.43□□□□□ -0.26
CDH1-212ENST00000611625 PODXLO00592 558 aa13.43□□□□□ -0.26
CDH1-212ENST00000611625 SART1O43290 800 aaKnown RBP13.43□□□□□ -0.26
CDH1-212ENST00000611625 SLC8A3P57103 927 aa13.43□□□□□ -0.26
CDH1-212ENST00000611625 SLC18A3Q16572 532 aa13.43□□□□□ -0.26
CDH1-212ENST00000611625 HIBCHQ6NVY1 386 aaPredicted RBP13.43□□□□□ -0.26
CDH1-212ENST00000611625 CASC4Q6P4E1 433 aa13.43□□□□□ -0.26
CDH1-212ENST00000611625 ARHGEF18Q6ZSZ5 1173 aa13.43□□□□□ -0.26
CDH1-212ENST00000611625 FBXO33Q7Z6M2 555 aa13.43□□□□□ -0.26
CDH1-212ENST00000611625 ZBTB8OSQ8IWT0 167 aa13.43□□□□□ -0.26
CDH1-212ENST00000611625 TAB3Q8N5C8 712 aaPredicted RBP13.43□□□□□ -0.26
CDH1-212ENST00000611625 ARHGEF1Q92888 912 aaKnown RBP13.43□□□□□ -0.26
CDH1-212ENST00000611625 KLHL29Q96CT2 875 aa13.43□□□□□ -0.26
CDH1-212ENST00000611625 CEP170P1Q96L14 293 aa13.43□□□□□ -0.26
CDH1-212ENST00000611625 PSMD1Q99460 953 aa13.43□□□□□ -0.26
CDH1-212ENST00000611625 GINS2Q9Y248 185 aa13.43□□□□□ -0.26
CDH1-212ENST00000611625 NOC2LQ9Y3T9 749 aaKnown RBP13.43□□□□□ -0.26
CDH1-212ENST00000611625 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.42□□□□□ -0.26
CDH1-212ENST00000611625 STK10O94804 968 aaKnown RBP13.42□□□□□ -0.26
CDH1-212ENST00000611625 KLK7P49862 253 aa13.42□□□□□ -0.26
CDH1-212ENST00000611625 FAM81BQ96LP2 452 aa13.42□□□□□ -0.26
CDH1-212ENST00000611625 SEPT9Q9UHD8 586 aaPredicted RBP13.42□□□□□ -0.26
CDH1-212ENST00000611625 GOLGA8IPA6NC78 632 aa13.42□□□□□ -0.26
CDH1-212ENST00000611625 GOLGA8JA6NMD2 632 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms