RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 HABP4Q5JVS0 413 aaKnown RBP6.01□□□□□ -1.45
SMCHD1-213ENST00000609587 ARHGAP36Q6ZRI8 547 aa6.01□□□□□ -1.45
SMCHD1-213ENST00000609587 OSTM1Q86WC4 334 aa6.01□□□□□ -1.45
SMCHD1-213ENST00000609587 KIF18BQ86Y91 864 aa6.01□□□□□ -1.45
SMCHD1-213ENST00000609587 FAM126BQ8IXS8 530 aa6.01□□□□□ -1.45
SMCHD1-213ENST00000609587 ANKRD13AQ8IZ07 590 aa6.01□□□□□ -1.45
SMCHD1-213ENST00000609587 C2orf69Q8N8R5 385 aa6.01□□□□□ -1.45
SMCHD1-213ENST00000609587 CHST14Q8NCH0 376 aa6.01□□□□□ -1.45
SMCHD1-213ENST00000609587 CHST13Q8NET6 341 aa6.01□□□□□ -1.45
SMCHD1-213ENST00000609587 OR2W6PQ8NHA6 318 aa6.01□□□□□ -1.45
SMCHD1-213ENST00000609587 ORAI3Q9BRQ5 295 aa6.01□□□□□ -1.45
SMCHD1-213ENST00000609587 ZNF747Q9BV97 191 aa6.01□□□□□ -1.45
SMCHD1-213ENST00000609587 SMOC1Q9H4F8 434 aa6.01□□□□□ -1.45
SMCHD1-213ENST00000609587 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.01□□□□□ -1.45
SMCHD1-213ENST00000609587 SLC6A20Q9NP91 592 aa6.01□□□□□ -1.45
SMCHD1-213ENST00000609587 TCRBV5S2A0A599 114 aa6□□□□□ -1.45
SMCHD1-213ENST00000609587 TRAF5O00463 557 aa6□□□□□ -1.45
SMCHD1-213ENST00000609587 PPM1GO15355 546 aaPredicted RBP6□□□□□ -1.45
SMCHD1-213ENST00000609587 MAFKO60675 156 aa6□□□□□ -1.45
SMCHD1-213ENST00000609587 FZD7O75084 574 aa6□□□□□ -1.45
SMCHD1-213ENST00000609587 CPEP16870 476 aa6□□□□□ -1.45
SMCHD1-213ENST00000609587 SCNN1BP51168 640 aa6□□□□□ -1.45
SMCHD1-213ENST00000609587 JAM2P57087 298 aa6□□□□□ -1.45
SMCHD1-213ENST00000609587 STRN3Q13033 797 aa6□□□□□ -1.45
SMCHD1-213ENST00000609587 DHCR24Q15392 516 aa6□□□□□ -1.45
SMCHD1-213ENST00000609587 EP400NLQ6ZTU2 488 aa6□□□□□ -1.45
SMCHD1-213ENST00000609587 STRA8Q7Z7C7 330 aa6□□□□□ -1.45
SMCHD1-213ENST00000609587 AFAP1L2Q8N4X5 818 aa6□□□□□ -1.45
SMCHD1-213ENST00000609587 LINC00482Q8N8I6 264 aa6□□□□□ -1.45
SMCHD1-213ENST00000609587 PHOSPHO1Q8TCT1 267 aa6□□□□□ -1.45
SMCHD1-213ENST00000609587 ZBTB8AQ96BR9 441 aa6□□□□□ -1.45
SMCHD1-213ENST00000609587 FAM126AQ9BYI3 521 aaPredicted RBP6□□□□□ -1.45
SMCHD1-213ENST00000609587 NGRNQ9NPE2 291 aaKnown RBP6□□□□□ -1.45
SMCHD1-213ENST00000609587 B4GALT6Q9UBX8 382 aa6□□□□□ -1.45
SMCHD1-213ENST00000609587 DSEQ9UL01 958 aa6□□□□□ -1.45
SMCHD1-213ENST00000609587 INVSQ9Y283 1065 aa6□□□□□ -1.45
SMCHD1-213ENST00000609587 ZKSCAN5Q9Y2L8 839 aa6□□□□□ -1.45
SMCHD1-213ENST00000609587 NUB1Q9Y5A7 615 aa6□□□□□ -1.45
SMCHD1-213ENST00000609587 PCDHB4Q9Y5E5 795 aa6□□□□□ -1.45
SMCHD1-213ENST00000609587 TCRBV5S4A2TA0A5A2 114 aa5.99□□□□□ -1.45
SMCHD1-213ENST00000609587 ZNF561-AS1K7EIQ3 104 aa5.99□□□□□ -1.45
SMCHD1-213ENST00000609587 GAS7O60861 476 aa5.99□□□□□ -1.45
SMCHD1-213ENST00000609587 AMY2AP04746 511 aa5.99□□□□□ -1.45
SMCHD1-213ENST00000609587 C8BP07358 591 aa5.99□□□□□ -1.45
SMCHD1-213ENST00000609587 CYP2C8P10632 490 aa5.99□□□□□ -1.45
SMCHD1-213ENST00000609587 AMY2BP19961 511 aa5.99□□□□□ -1.45
SMCHD1-213ENST00000609587 MECP2P51608 486 aaKnown RBP5.99□□□□□ -1.45
SMCHD1-213ENST00000609587 SMAD4Q13485 552 aaKnown RBP5.99□□□□□ -1.45
SMCHD1-213ENST00000609587 SART3Q15020 963 aaKnown RBP5.99□□□□□ -1.45
SMCHD1-213ENST00000609587 ARHGAP44Q17R89 818 aa5.99□□□□□ -1.45
SMCHD1-213ENST00000609587 LIMS2Q7Z4I7 341 aa5.99□□□□□ -1.45
SMCHD1-213ENST00000609587 ZC3H18Q86VM9 953 aaKnown RBP5.99□□□□□ -1.45
SMCHD1-213ENST00000609587 PTRH1Q86Y79 214 aaKnown RBP5.99□□□□□ -1.45
SMCHD1-213ENST00000609587 NXPE1Q8N323 547 aa5.99□□□□□ -1.45
SMCHD1-213ENST00000609587 ATL2Q8NHH9 583 aa5.99□□□□□ -1.45
SMCHD1-213ENST00000609587 UHMK1Q8TAS1 419 aaKnown RBP5.99□□□□□ -1.45
SMCHD1-213ENST00000609587 USP7Q93009 1102 aa5.99□□□□□ -1.45
SMCHD1-213ENST00000609587 PDGFDQ9GZP0 370 aaPredicted RBP5.99□□□□□ -1.45
SMCHD1-213ENST00000609587 VPS11Q9H270 941 aa5.99□□□□□ -1.45
SMCHD1-213ENST00000609587 SMURF1Q9HCE7 757 aa5.99□□□□□ -1.45
SMCHD1-213ENST00000609587 MCM8Q9UJA3 840 aa5.99□□□□□ -1.45
SMCHD1-213ENST00000609587 ATP8A1Q9Y2Q0 1164 aa5.99□□□□□ -1.45
SMCHD1-213ENST00000609587 SLC12A8A0AV02 714 aa5.98□□□□□ -1.45
SMCHD1-213ENST00000609587 PTPDC1A2A3K4 754 aa5.98□□□□□ -1.45
SMCHD1-213ENST00000609587 ZNF891A8MT65 544 aaPredicted RBP5.98□□□□□ -1.45
SMCHD1-213ENST00000609587 KCNK3O14649 394 aa5.98□□□□□ -1.45
SMCHD1-213ENST00000609587 F2P00734 622 aa5.98□□□□□ -1.45
SMCHD1-213ENST00000609587 POU3F3P20264 500 aaPredicted RBP5.98□□□□□ -1.45
SMCHD1-213ENST00000609587 KLF10Q13118 480 aa5.98□□□□□ -1.45
SMCHD1-213ENST00000609587 CR1LQ2VPA4 569 aa5.98□□□□□ -1.45
SMCHD1-213ENST00000609587 RGL3Q3MIN7 710 aa5.98□□□□□ -1.45
SMCHD1-213ENST00000609587 CD300LDQ6UXZ3 194 aa5.98□□□□□ -1.45
SMCHD1-213ENST00000609587 DDX42Q86XP3 938 aaKnown RBP eCLIP5.98□□□□□ -1.45
SMCHD1-213ENST00000609587 TRIM48Q8IWZ4 208 aa5.98□□□□□ -1.45
SMCHD1-213ENST00000609587 ARRDC4Q8NCT1 418 aa5.98□□□□□ -1.45
SMCHD1-213ENST00000609587 SH3RF2Q8TEC5 729 aa5.98□□□□□ -1.45
SMCHD1-213ENST00000609587 BOCQ9BWV1 1114 aa5.98□□□□□ -1.45
SMCHD1-213ENST00000609587 CD244Q9BZW8 370 aa5.98□□□□□ -1.45
SMCHD1-213ENST00000609587 HSPBP1Q9NZL4 362 aa5.98□□□□□ -1.45
SMCHD1-213ENST00000609587 MYOTQ9UBF9 498 aa5.98□□□□□ -1.45
SMCHD1-213ENST00000609587 ASH2LQ9UBL3 628 aa5.98□□□□□ -1.45
SMCHD1-213ENST00000609587 ING1Q9UK53 422 aaPredicted RBP5.98□□□□□ -1.45
SMCHD1-213ENST00000609587 SRPK3Q9UPE1 567 aa5.98□□□□□ -1.45
SMCHD1-213ENST00000609587 MAN2B1O00754 1011 aa5.97□□□□□ -1.45
SMCHD1-213ENST00000609587 SLC27A2O14975 620 aa5.97□□□□□ -1.45
SMCHD1-213ENST00000609587 KRT37O76014 449 aa5.97□□□□□ -1.45
SMCHD1-213ENST00000609587 IL2P60568 153 aa5.97□□□□□ -1.45
SMCHD1-213ENST00000609587 DSG1Q02413 1049 aa5.97□□□□□ -1.45
SMCHD1-213ENST00000609587 ICAM4Q14773 271 aa5.97□□□□□ -1.45
SMCHD1-213ENST00000609587 TTLL7Q6ZT98 887 aa5.97□□□□□ -1.45
SMCHD1-213ENST00000609587 OTOP1Q7RTM1 612 aa5.97□□□□□ -1.45
SMCHD1-213ENST00000609587 NLGN4XQ8N0W4 816 aa5.97□□□□□ -1.45
SMCHD1-213ENST00000609587 LGI4Q8N135 537 aa5.97□□□□□ -1.45
SMCHD1-213ENST00000609587 FAM26EQ8N5C1 309 aa5.97□□□□□ -1.45
SMCHD1-213ENST00000609587 TTLL11Q8NHH1 800 aa5.97□□□□□ -1.45
SMCHD1-213ENST00000609587 DDX11Q96FC9 970 aa5.97□□□□□ -1.45
SMCHD1-213ENST00000609587 TOE1Q96GM8 510 aaKnown RBP5.97□□□□□ -1.45
SMCHD1-213ENST00000609587 TTC1Q99614 292 aa5.97□□□□□ -1.45
SMCHD1-213ENST00000609587 DTLQ9NZJ0 730 aa5.97□□□□□ -1.45
SMCHD1-213ENST00000609587 CDK11BP21127 795 aaKnown RBP5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms