RNA–Protein interactions for RNA: ENST00000609041.1

TAF4-208, Transcript of TATA-box binding protein associated factor 4, human

Gene TAF4, Length 2,487 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TAF4-208	ENST00000609041	CFAP221	Q4G0U5	840 aa		21.32	■■□□□ 1
TAF4-208	ENST00000609041	DCAF17	Q5H9S7	520 aa	Predicted RBP	21.32	■■□□□ 1
TAF4-208	ENST00000609041	SND1	Q7KZF4	910 aa	Known RBP eCLIP	21.32	■■□□□ 1
TAF4-208	ENST00000609041	RUBCN	Q92622	972 aa		21.32	■■□□□ 1
TAF4-208	ENST00000609041	STIM2	Q9P246	746 aa		21.32	■■□□□ 1
TAF4-208	ENST00000609041	RABGAP1	Q9Y3P9	1069 aa		21.32	■■□□□ 1
TAF4-208	ENST00000609041	ASTN1	O14525	1302 aa		21.32	■■□□□ 1
TAF4-208	ENST00000609041	ATRNL1	Q5VV63	1379 aa		21.32	■■□□□ 1
TAF4-208	ENST00000609041	XRCC5	P13010	732 aa	Known RBP	21.32	■■□□□ 1
TAF4-208	ENST00000609041	PTK2	Q05397	1052 aa		21.32	■■□□□ 1
TAF4-208	ENST00000609041	PRMT6	Q96LA8	375 aa	Predicted RBP	21.32	■■□□□ 1
TAF4-208	ENST00000609041	CSRNP1	Q96S65	589 aa		21.32	■■□□□ 1
TAF4-208	ENST00000609041	PLCB1	Q9NQ66	1216 aa		21.32	■■□□□ 1
TAF4-208	ENST00000609041	PACSIN2	Q9UNF0	486 aa	Predicted RBP	21.32	■■□□□ 1
TAF4-208	ENST00000609041	PCDHGC5	Q9Y5F6	944 aa		21.32	■■□□□ 1
TAF4-208	ENST00000609041	STK24	Q9Y6E0	443 aa		21.32	■■□□□ 1
TAF4-208	ENST00000609041	ATAD5	Q96QE3	1844 aa		21.31	■■□□□ 1
TAF4-208	ENST00000609041	GCNT3	O95395	438 aa		21.31	■■□□□ 1
TAF4-208	ENST00000609041	PON1	P27169	355 aa		21.31	■■□□□ 1
TAF4-208	ENST00000609041	EXOC3L4	Q17RC7	722 aa		21.31	■■□□□ 1
TAF4-208	ENST00000609041	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	21.31	■■□□□ 1
TAF4-208	ENST00000609041	IRF2BP2	Q7Z5L9	587 aa		21.31	■■□□□ 1
TAF4-208	ENST00000609041	SPAG5	Q96R06	1193 aa		21.31	■■□□□ 1
TAF4-208	ENST00000609041	POLR3C	Q9BUI4	534 aa	Predicted RBP	21.31	■■□□□ 1
TAF4-208	ENST00000609041	TYW1	Q9NV66	732 aa	Known RBP	21.31	■■□□□ 1
TAF4-208	ENST00000609041	SFI1	A8K8P3	1242 aa		21.31	■■□□□ 1
TAF4-208	ENST00000609041	TBCA	O75347	108 aa	Known RBP	21.31	■■□□□ 1
TAF4-208	ENST00000609041	NR3C1	P04150	777 aa		21.31	■■□□□ 1
TAF4-208	ENST00000609041	CYP3A4	P08684	503 aa		21.31	■■□□□ 1
TAF4-208	ENST00000609041	POLD1	P28340	1107 aa		21.31	■■□□□ 1
TAF4-208	ENST00000609041	ECE1	P42892	770 aa		21.31	■■□□□ 1
TAF4-208	ENST00000609041	CASP4	P49662	377 aa		21.31	■■□□□ 1
TAF4-208	ENST00000609041	BMT2	Q1RMZ1	405 aa		21.31	■■□□□ 1
TAF4-208	ENST00000609041	C8orf74	Q6P047	294 aa		21.31	■■□□□ 1
TAF4-208	ENST00000609041	PIGO	Q8TEQ8	1089 aa		21.31	■■□□□ 1
TAF4-208	ENST00000609041	IGLV3-22	A0A075B6J6	115 aa		21.3	■■□□□ 1
TAF4-208	ENST00000609041	ENTPD3	O75355	529 aa		21.3	■■□□□ 1
TAF4-208	ENST00000609041	EYA4	O95677	639 aa		21.3	■■□□□ 1
TAF4-208	ENST00000609041	HMGB2	P26583	209 aa	Known RBP	21.3	■■□□□ 1
TAF4-208	ENST00000609041	CTTN	Q14247	550 aa	Known RBP	21.3	■■□□□ 1
TAF4-208	ENST00000609041	TCERG1L	Q5VWI1	586 aa		21.3	■■□□□ 1
TAF4-208	ENST00000609041	LEKR1	Q6ZMV7	388 aa		21.3	■■□□□ 1
TAF4-208	ENST00000609041	ZNF571	Q7Z3V5	609 aa	Predicted RBP	21.3	■■□□□ 1
TAF4-208	ENST00000609041	GOLGA6B	A6NDN3	693 aa		21.3	■■□□□ 1
TAF4-208	ENST00000609041	PIK3CD	O00329	1044 aa		21.3	■■□□□ 1
TAF4-208	ENST00000609041	CLIC2	O15247	247 aa		21.3	■■□□□ 1
TAF4-208	ENST00000609041	KIAA1755	Q5JYT7	1200 aa		21.3	■■□□□ 1
TAF4-208	ENST00000609041	MEI1	Q5TIA1	1274 aa		21.3	■■□□□ 1
TAF4-208	ENST00000609041	AFAP1L1	Q8TED9	768 aa		21.3	■■□□□ 1
TAF4-208	ENST00000609041	WDR18	Q9BV38	432 aa		21.3	■■□□□ 1
TAF4-208	ENST00000609041	GRID2IP	A4D2P6	1211 aa		21.29	■■□□□ 1
TAF4-208	ENST00000609041		H0YIN7	160 aa		21.29	■■□□□ 1
TAF4-208	ENST00000609041	EPHA7	Q15375	998 aa		21.29	■■□□□ 1
TAF4-208	ENST00000609041	RINT1	Q6NUQ1	792 aa		21.29	■■□□□ 1
TAF4-208	ENST00000609041	GOLGA6L1	Q8N7Z2	621 aa		21.29	■■□□□ 1
TAF4-208	ENST00000609041	RBM46	Q8TBY0	533 aa	Known RBP	21.29	■■□□□ 1
TAF4-208	ENST00000609041	RNF14	Q9UBS8	474 aa		21.29	■■□□□ 1
TAF4-208	ENST00000609041	CFB	P00751	764 aa		21.29	■■□□□ 1
TAF4-208	ENST00000609041	STAT2	P52630	851 aa		21.29	■■□□□ 1
TAF4-208	ENST00000609041	ZNF646	O15015	1829 aa	Predicted RBP	21.28	■■□□□ 1
TAF4-208	ENST00000609041	SMCHD1	A6NHR9	2005 aa		21.28	■■□□□ 1
TAF4-208	ENST00000609041	CHMP2A	O43633	222 aa		21.28	■■□□□ 1
TAF4-208	ENST00000609041	EPB41	P11171	864 aa	Known RBP	21.28	■■□□□ 1
TAF4-208	ENST00000609041	CHRNA5	P30532	468 aa		21.28	■■□□□ 1
TAF4-208	ENST00000609041	DNAAF5	Q86Y56	855 aa		21.28	■■□□□ 1
TAF4-208	ENST00000609041	TPH2	Q8IWU9	490 aa		21.28	■■□□□ 1
TAF4-208	ENST00000609041	SLC35C1	Q96A29	364 aa		21.28	■■□□□ 1
TAF4-208	ENST00000609041	HSD17B14	Q9BPX1	270 aa		21.28	■■□□□ 1
TAF4-208	ENST00000609041	IKZF4	Q9H2S9	585 aa		21.28	■■□□□ 1
TAF4-208	ENST00000609041	AJAP1	Q9UKB5	411 aa	Predicted RBP	21.28	■■□□□ 1
TAF4-208	ENST00000609041	PCDHB13	Q9Y5F0	798 aa		21.28	■■□□□ 1
TAF4-208	ENST00000609041	ZBTB39	O15060	712 aa		21.28	■■□□□ 1
TAF4-208	ENST00000609041	RPL13	P26373	211 aa	Known RBP	21.28	■■□□□ 1
TAF4-208	ENST00000609041	EPHB4	P54760	987 aa		21.28	■■□□□ 1
TAF4-208	ENST00000609041	STYK1	Q6J9G0	422 aa		21.28	■■□□□ 1
TAF4-208	ENST00000609041	OTOP1	Q7RTM1	612 aa		21.28	■■□□□ 1
TAF4-208	ENST00000609041	ACER1	Q8TDN7	264 aa		21.28	■■□□□ 1
TAF4-208	ENST00000609041	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	21.28	■■□□□ 1
TAF4-208	ENST00000609041	METTL14	Q9HCE5	456 aa	Known RBP	21.28	■■□□□ 1
TAF4-208	ENST00000609041	OLFML3	Q9NRN5	406 aa		21.28	■■□□□ 1
TAF4-208	ENST00000609041	SLX4	Q8IY92	1834 aa		21.27	■■□□□ 1
TAF4-208	ENST00000609041	SLC16A3	O15427	465 aa	Known RBP	21.27	■■□□□ 1
TAF4-208	ENST00000609041	TGFB1I1	O43294	461 aa		21.27	■■□□□ 1
TAF4-208	ENST00000609041	SLITRK3	O94933	977 aa		21.27	■■□□□ 1
TAF4-208	ENST00000609041	GLE1	Q53GS7	698 aa	Known RBP	21.27	■■□□□ 1
TAF4-208	ENST00000609041	CC2D2B	Q6DHV5	1058 aa		21.27	■■□□□ 1
TAF4-208	ENST00000609041	SIX2	Q9NPC8	291 aa		21.27	■■□□□ 1
TAF4-208	ENST00000609041	APBA3	O96018	575 aa		21.27	■□□□□ 0.99
TAF4-208	ENST00000609041	GLI1	P08151	1106 aa		21.27	■□□□□ 0.99
TAF4-208	ENST00000609041	RNASE9	P60153	205 aa	Known RBP	21.27	■□□□□ 0.99
TAF4-208	ENST00000609041	UBXN2A	P68543	259 aa		21.27	■□□□□ 0.99
TAF4-208	ENST00000609041	DYDC2	Q96IM9	177 aa		21.27	■□□□□ 0.99
TAF4-208	ENST00000609041	TRERF1	Q96PN7	1200 aa		21.27	■□□□□ 0.99
TAF4-208	ENST00000609041	PLEKHA4	Q9H4M7	779 aa		21.27	■□□□□ 0.99
TAF4-208	ENST00000609041	GCNT4	Q9P109	453 aa		21.27	■□□□□ 0.99
TAF4-208	ENST00000609041	BZW2	Q9Y6E2	419 aa	Known RBP	21.27	■□□□□ 0.99
TAF4-208	ENST00000609041	PLSCR1	O15162	318 aa		21.26	■□□□□ 0.99
TAF4-208	ENST00000609041	NMT1	P30419	496 aa	Known RBP	21.26	■□□□□ 0.99
TAF4-208	ENST00000609041	LRCH2	Q5VUJ6	765 aa		21.26	■□□□□ 0.99
TAF4-208	ENST00000609041	EMB	Q6PCB8	327 aa		21.26	■□□□□ 0.99

Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms