RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 TMX1Q9H3N1 280 aa17.21■□□□□ 0.35
SSBP4-214ENST00000607020 SENP2Q9HC62 589 aa17.21■□□□□ 0.35
SSBP4-214ENST00000607020 AAASQ9NRG9 546 aa17.21■□□□□ 0.35
SSBP4-214ENST00000607020 RNF216Q9NWF9 866 aaPredicted RBP17.21■□□□□ 0.35
SSBP4-214ENST00000607020 PCDHB12Q9Y5F1 795 aa17.21■□□□□ 0.35
SSBP4-214ENST00000607020 USP34Q70CQ2 3546 aa17.21■□□□□ 0.35
SSBP4-214ENST00000607020 PTPRZ1P23471 2315 aaPredicted RBP17.2■□□□□ 0.34
SSBP4-214ENST00000607020 ERICH2A1L162 156 aa17.2■□□□□ 0.34
SSBP4-214ENST00000607020 PAK2Q13177 524 aa17.2■□□□□ 0.34
SSBP4-214ENST00000607020 AAMPQ13685 434 aa17.2■□□□□ 0.34
SSBP4-214ENST00000607020 PAN2Q504Q3 1202 aaKnown RBP17.2■□□□□ 0.34
SSBP4-214ENST00000607020 CATIPQ7Z7H3 387 aa17.2■□□□□ 0.34
SSBP4-214ENST00000607020 CHD1LQ86WJ1 897 aa17.2■□□□□ 0.34
SSBP4-214ENST00000607020 FAM49AQ9H0Q0 323 aaPredicted RBP17.2■□□□□ 0.34
SSBP4-214ENST00000607020 TLR9Q9NR96 1032 aa17.2■□□□□ 0.34
SSBP4-214ENST00000607020 LRFN2Q9ULH4 789 aa17.2■□□□□ 0.34
SSBP4-214ENST00000607020 PCDHGC5Q9Y5F6 944 aa17.2■□□□□ 0.34
SSBP4-214ENST00000607020 CFAP54Q96N23 3096 aa17.19■□□□□ 0.34
SSBP4-214ENST00000607020 SMIM35A0A1B0GVV1 85 aa17.19■□□□□ 0.34
SSBP4-214ENST00000607020 PER2O15055 1255 aa17.19■□□□□ 0.34
SSBP4-214ENST00000607020 IGBP1P78318 339 aa17.19■□□□□ 0.34
SSBP4-214ENST00000607020 NUCB1Q02818 461 aa17.19■□□□□ 0.34
SSBP4-214ENST00000607020 MTMR1Q13613 665 aa17.19■□□□□ 0.34
SSBP4-214ENST00000607020 WTAPQ15007 396 aa17.19■□□□□ 0.34
SSBP4-214ENST00000607020 SART3Q15020 963 aaKnown RBP17.19■□□□□ 0.34
SSBP4-214ENST00000607020 PLPPR4Q7Z2D5 763 aa17.19■□□□□ 0.34
SSBP4-214ENST00000607020 IGDCC4Q8TDY8 1250 aa17.19■□□□□ 0.34
SSBP4-214ENST00000607020 RRP36Q96EU6 259 aaKnown RBP17.19■□□□□ 0.34
SSBP4-214ENST00000607020 RIPOR3Q96MK2 946 aa17.19■□□□□ 0.34
SSBP4-214ENST00000607020 IL25Q9H293 177 aa17.19■□□□□ 0.34
SSBP4-214ENST00000607020 JADE2Q9NQC1 790 aa17.19■□□□□ 0.34
SSBP4-214ENST00000607020 FAM86C1Q9NVL1 165 aa17.19■□□□□ 0.34
SSBP4-214ENST00000607020 LZTS1Q9Y250 596 aa17.19■□□□□ 0.34
SSBP4-214ENST00000607020 PCDHB7Q9Y5E2 793 aa17.19■□□□□ 0.34
SSBP4-214ENST00000607020 U3KPZ7 1027 aaPredicted RBP17.19■□□□□ 0.34
SSBP4-214ENST00000607020 NLRC5Q86WI3 1866 aa17.18■□□□□ 0.34
SSBP4-214ENST00000607020 PPFIA3O75145 1194 aa17.18■□□□□ 0.34
SSBP4-214ENST00000607020 FGF18O76093 207 aa17.18■□□□□ 0.34
SSBP4-214ENST00000607020 CYP21A2P08686 494 aa17.18■□□□□ 0.34
SSBP4-214ENST00000607020 HOXB8P17481 243 aaPredicted RBP17.18■□□□□ 0.34
SSBP4-214ENST00000607020 GATMP50440 423 aa17.18■□□□□ 0.34
SSBP4-214ENST00000607020 ERVFC1P60507 584 aa17.18■□□□□ 0.34
SSBP4-214ENST00000607020 ANKRD54Q6NXT1 300 aa17.18■□□□□ 0.34
SSBP4-214ENST00000607020 ZBTB10Q96DT7 871 aa17.18■□□□□ 0.34
SSBP4-214ENST00000607020 LZTS2Q9BRK4 669 aa17.18■□□□□ 0.34
SSBP4-214ENST00000607020 RWDD1Q9H446 243 aaPredicted RBP17.18■□□□□ 0.34
SSBP4-214ENST00000607020 AZI2Q9H6S1 392 aa17.18■□□□□ 0.34
SSBP4-214ENST00000607020 PSTPIP2Q9H939 334 aa17.18■□□□□ 0.34
SSBP4-214ENST00000607020 C1orf112Q9NSG2 853 aa17.18■□□□□ 0.34
SSBP4-214ENST00000607020 GALR2O43603 387 aaPredicted RBP17.17■□□□□ 0.34
SSBP4-214ENST00000607020 SRGAP2BP0DMP2 458 aa17.17■□□□□ 0.34
SSBP4-214ENST00000607020 FAM189BP81408 668 aa17.17■□□□□ 0.34
SSBP4-214ENST00000607020 RBM10P98175 930 aaKnown RBP17.17■□□□□ 0.34
SSBP4-214ENST00000607020 KRT76Q01546 638 aa17.17■□□□□ 0.34
SSBP4-214ENST00000607020 PLCB3Q01970 1234 aa17.17■□□□□ 0.34
SSBP4-214ENST00000607020 PLCB4Q15147 1175 aa17.17■□□□□ 0.34
SSBP4-214ENST00000607020 SYCE2Q6PIF2 218 aa17.17■□□□□ 0.34
SSBP4-214ENST00000607020 PIBF1Q8WXW3 757 aa17.17■□□□□ 0.34
SSBP4-214ENST00000607020 ERVK-5Q9HDB9 667 aa17.17■□□□□ 0.34
SSBP4-214ENST00000607020 RGS18Q9NS28 235 aa17.17■□□□□ 0.34
SSBP4-214ENST00000607020 C9IYK1 514 aa17.16■□□□□ 0.34
SSBP4-214ENST00000607020 KIF5BP33176 963 aa17.16■□□□□ 0.34
SSBP4-214ENST00000607020 GNAQP50148 359 aa17.16■□□□□ 0.34
SSBP4-214ENST00000607020 TMEM62Q0P6H9 643 aa17.16■□□□□ 0.34
SSBP4-214ENST00000607020 ODR4Q5SWX8 454 aa17.16■□□□□ 0.34
SSBP4-214ENST00000607020 B4GALNT3Q6L9W6 998 aa17.16■□□□□ 0.34
SSBP4-214ENST00000607020 MTHFD1LQ6UB35 978 aa17.16■□□□□ 0.34
SSBP4-214ENST00000607020 SLC24A5Q71RS6 500 aa17.16■□□□□ 0.34
SSBP4-214ENST00000607020 UBALD2Q8IYN6 164 aa17.16■□□□□ 0.34
SSBP4-214ENST00000607020 COLGALT1Q8NBJ5 622 aa17.16■□□□□ 0.34
SSBP4-214ENST00000607020 NCOA7Q8NI08 942 aa17.16■□□□□ 0.34
SSBP4-214ENST00000607020 JPH1Q9HDC5 661 aaPredicted RBP17.16■□□□□ 0.34
SSBP4-214ENST00000607020 TYW1Q9NV66 732 aaKnown RBP17.16■□□□□ 0.34
SSBP4-214ENST00000607020 SLC9A2Q9UBY0 812 aa17.16■□□□□ 0.34
SSBP4-214ENST00000607020 SEC63Q9UGP8 760 aaKnown RBP17.16■□□□□ 0.34
SSBP4-214ENST00000607020 TBKBP1A7MCY6 615 aa17.15■□□□□ 0.34
SSBP4-214ENST00000607020 H0Y858 1186 aa17.15■□□□□ 0.34
SSBP4-214ENST00000607020 MGEA5O60502 916 aa17.15■□□□□ 0.34
SSBP4-214ENST00000607020 DDAH1O94760 285 aa17.15■□□□□ 0.34
SSBP4-214ENST00000607020 ATG7O95352 703 aa17.15■□□□□ 0.34
SSBP4-214ENST00000607020 NBL1P41271 181 aa17.15■□□□□ 0.34
SSBP4-214ENST00000607020 SLC26A2P50443 739 aa17.15■□□□□ 0.34
SSBP4-214ENST00000607020 STAT5BP51692 787 aa17.15■□□□□ 0.34
SSBP4-214ENST00000607020 NFX1Q12986 1120 aaKnown RBP17.15■□□□□ 0.34
SSBP4-214ENST00000607020 SPOUT1Q5T280 376 aaKnown RBP17.15■□□□□ 0.34
SSBP4-214ENST00000607020 FAM102BQ5T8I3 360 aa17.15■□□□□ 0.34
SSBP4-214ENST00000607020 THNSL1Q8IYQ7 743 aa17.15■□□□□ 0.34
SSBP4-214ENST00000607020 MRPS27Q92552 414 aaKnown RBP17.15■□□□□ 0.34
SSBP4-214ENST00000607020 MTA3Q9BTC8 594 aa17.15■□□□□ 0.34
SSBP4-214ENST00000607020 CWH43Q9H720 699 aa17.15■□□□□ 0.34
SSBP4-214ENST00000607020 ELAC1Q9H777 363 aaKnown RBP17.15■□□□□ 0.34
SSBP4-214ENST00000607020 NGRNQ9NPE2 291 aaKnown RBP17.15■□□□□ 0.34
SSBP4-214ENST00000607020 TMEM260Q9NX78 707 aa17.15■□□□□ 0.34
SSBP4-214ENST00000607020 PUF60Q9UHX1 559 aaKnown RBP17.15■□□□□ 0.34
SSBP4-214ENST00000607020 TRPC6Q9Y210 931 aa17.15■□□□□ 0.34
SSBP4-214ENST00000607020 NFASCO94856 1347 aa17.15■□□□□ 0.34
SSBP4-214ENST00000607020 LAMA4Q16363 1823 aa17.14■□□□□ 0.34
SSBP4-214ENST00000607020 ATG2AQ2TAZ0 1938 aa17.14■□□□□ 0.33
SSBP4-214ENST00000607020 E7EWF7 191 aa17.14■□□□□ 0.33
SSBP4-214ENST00000607020 LAG3P18627 525 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms