RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 IKBKEQ14164 716 aa13.93□□□□□ -0.18
CTSA-210ENST00000606000 MIS18BP1Q6P0N0 1132 aa13.93□□□□□ -0.18
CTSA-210ENST00000606000 PDXDC2PQ6P474 469 aa13.93□□□□□ -0.18
CTSA-210ENST00000606000 POTEBQ6S5H4 581 aa13.93□□□□□ -0.18
CTSA-210ENST00000606000 USP38Q8NB14 1042 aa13.93□□□□□ -0.18
CTSA-210ENST00000606000 NSUN7Q8NE18 718 aaKnown RBP13.93□□□□□ -0.18
CTSA-210ENST00000606000 PHOSPHO2Q8TCD6 241 aa13.93□□□□□ -0.18
CTSA-210ENST00000606000 UNC45AQ9H3U1 944 aa13.93□□□□□ -0.18
CTSA-210ENST00000606000 TBC1D22BQ9NU19 505 aa13.93□□□□□ -0.18
CTSA-210ENST00000606000 CDY2AQ9Y6F7 541 aa13.93□□□□□ -0.18
CTSA-210ENST00000606000 COL6A3P12111 3177 aa13.93□□□□□ -0.18
CTSA-210ENST00000606000 ZBTB42B2RXF5 422 aa13.92□□□□□ -0.18
CTSA-210ENST00000606000 TLL1O43897 1013 aa13.92□□□□□ -0.18
CTSA-210ENST00000606000 USP11P51784 963 aa13.92□□□□□ -0.18
CTSA-210ENST00000606000 KRT76Q01546 638 aa13.92□□□□□ -0.18
CTSA-210ENST00000606000 TAP1Q03518 808 aa13.92□□□□□ -0.18
CTSA-210ENST00000606000 LPIN1Q14693 890 aa13.92□□□□□ -0.18
CTSA-210ENST00000606000 NONOQ15233 471 aaKnown RBP eCLIP13.92□□□□□ -0.18
CTSA-210ENST00000606000 UGCGQ16739 394 aa13.92□□□□□ -0.18
CTSA-210ENST00000606000 FAM160B1Q5W0V3 765 aa13.92□□□□□ -0.18
CTSA-210ENST00000606000 ZNF746Q6NUN9 644 aaPredicted RBP13.92□□□□□ -0.18
CTSA-210ENST00000606000 TAF2Q6P1X5 1199 aa13.92□□□□□ -0.18
CTSA-210ENST00000606000 SLC17A8Q8NDX2 589 aa13.92□□□□□ -0.18
CTSA-210ENST00000606000 ATP8B4Q8TF62 1192 aa13.92□□□□□ -0.18
CTSA-210ENST00000606000 SLC5A5Q92911 643 aa13.92□□□□□ -0.18
CTSA-210ENST00000606000 GABBR1Q9UBS5 961 aa13.92□□□□□ -0.18
CTSA-210ENST00000606000 SAMM50Q9Y512 469 aa13.92□□□□□ -0.18
CTSA-210ENST00000606000 IGSF9BQ9UPX0 1349 aa13.91□□□□□ -0.18
CTSA-210ENST00000606000 MYH9P35579 1960 aaKnown RBP13.91□□□□□ -0.18
CTSA-210ENST00000606000 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.91□□□□□ -0.18
CTSA-210ENST00000606000 RRN3P2A6NIE6 340 aa13.91□□□□□ -0.18
CTSA-210ENST00000606000 GAS7O60861 476 aa13.91□□□□□ -0.18
CTSA-210ENST00000606000 MRPS6P82932 125 aaKnown RBP13.91□□□□□ -0.18
CTSA-210ENST00000606000 NR5A1Q13285 461 aa13.91□□□□□ -0.18
CTSA-210ENST00000606000 LETM2Q2VYF4 491 aa13.91□□□□□ -0.18
CTSA-210ENST00000606000 Q4G0T1 1027 aa13.91□□□□□ -0.18
CTSA-210ENST00000606000 LRCH2Q5VUJ6 765 aa13.91□□□□□ -0.18
CTSA-210ENST00000606000 GALNT17Q6IS24 598 aa13.91□□□□□ -0.18
CTSA-210ENST00000606000 MTHFD1LQ6UB35 978 aa13.91□□□□□ -0.18
CTSA-210ENST00000606000 PIK3AP1Q6ZUJ8 805 aa13.91□□□□□ -0.18
CTSA-210ENST00000606000 KRT25Q7Z3Z0 450 aa13.91□□□□□ -0.18
CTSA-210ENST00000606000 RPAINQ86UA6 219 aa13.91□□□□□ -0.18
CTSA-210ENST00000606000 CKAP2LQ8IYA6 745 aa13.91□□□□□ -0.18
CTSA-210ENST00000606000 SMAP1Q8IYB5 467 aaPredicted RBP13.91□□□□□ -0.18
CTSA-210ENST00000606000 MYOCDQ8IZQ8 938 aa13.91□□□□□ -0.18
CTSA-210ENST00000606000 SEPT8Q92599 483 aa13.91□□□□□ -0.18
CTSA-210ENST00000606000 MBOAT7Q96N66 472 aa13.91□□□□□ -0.18
CTSA-210ENST00000606000 PPP1R16BQ96T49 567 aa13.91□□□□□ -0.18
CTSA-210ENST00000606000 TEKT3Q9BXF9 490 aa13.91□□□□□ -0.18
CTSA-210ENST00000606000 IFIH1Q9BYX4 1025 aaKnown RBP13.91□□□□□ -0.18
CTSA-210ENST00000606000 PCDHA10Q9Y5I2 948 aa13.91□□□□□ -0.18
CTSA-210ENST00000606000 MAFBQ9Y5Q3 323 aaPredicted RBP13.91□□□□□ -0.18
CTSA-210ENST00000606000 EYSQ5T1H1 3165 aa13.9□□□□□ -0.18
CTSA-210ENST00000606000 CYP3A7-CYP3A51PA0A087WV96 503 aa13.9□□□□□ -0.18
CTSA-210ENST00000606000 CCDC194A0A1B0GVG4 234 aa13.9□□□□□ -0.18
CTSA-210ENST00000606000 ZNF862O60290 1169 aa13.9□□□□□ -0.18
CTSA-210ENST00000606000 HBP1O60381 514 aa13.9□□□□□ -0.18
CTSA-210ENST00000606000 PSMD10O75832 226 aa13.9□□□□□ -0.18
CTSA-210ENST00000606000 GJB5O95377 273 aa13.9□□□□□ -0.18
CTSA-210ENST00000606000 PSAPP07602 524 aa13.9□□□□□ -0.18
CTSA-210ENST00000606000 CYP3A7P24462 503 aa13.9□□□□□ -0.18
CTSA-210ENST00000606000 KLRC1P26715 233 aa13.9□□□□□ -0.18
CTSA-210ENST00000606000 SLC26A2P50443 739 aa13.9□□□□□ -0.18
CTSA-210ENST00000606000 FBXO47Q5MNV8 452 aa13.9□□□□□ -0.18
CTSA-210ENST00000606000 CCDC83Q8IWF9 413 aa13.9□□□□□ -0.18
CTSA-210ENST00000606000 ETNPPLQ8TBG4 499 aa13.9□□□□□ -0.18
CTSA-210ENST00000606000 PPM1EQ8WY54 764 aa13.9□□□□□ -0.18
CTSA-210ENST00000606000 GAS2L1Q99501 681 aaPredicted RBP13.9□□□□□ -0.18
CTSA-210ENST00000606000 ZBED2Q9BTP6 218 aa13.9□□□□□ -0.18
CTSA-210ENST00000606000 C22orf23Q9BZE7 217 aa13.9□□□□□ -0.18
CTSA-210ENST00000606000 AGO3Q9H9G7 860 aaKnown RBP13.9□□□□□ -0.18
CTSA-210ENST00000606000 DISC1Q9NRI5 854 aa13.9□□□□□ -0.18
CTSA-210ENST00000606000 DDX25Q9UHL0 483 aaKnown RBP13.9□□□□□ -0.18
CTSA-210ENST00000606000 TCEAL9Q9UHQ7 104 aa13.9□□□□□ -0.18
CTSA-210ENST00000606000 PCDHA2Q9Y5H9 948 aa13.9□□□□□ -0.18
CTSA-210ENST00000606000 TRPV2Q9Y5S1 764 aa13.9□□□□□ -0.18
CTSA-210ENST00000606000 COL4A6Q14031 1691 aa13.89□□□□□ -0.19
CTSA-210ENST00000606000 TMEM150BA6NC51 233 aa13.89□□□□□ -0.19
CTSA-210ENST00000606000 WDR64B1ANS9 1081 aa13.89□□□□□ -0.19
CTSA-210ENST00000606000 KIF28PB7ZC32 967 aa13.89□□□□□ -0.19
CTSA-210ENST00000606000 WNT7AO00755 349 aa13.89□□□□□ -0.19
CTSA-210ENST00000606000 EIF5BO60841 1220 aaKnown RBP13.89□□□□□ -0.19
CTSA-210ENST00000606000 C22orf31O95567 290 aa13.89□□□□□ -0.19
CTSA-210ENST00000606000 AMHP03971 560 aa13.89□□□□□ -0.19
CTSA-210ENST00000606000 XBP1P17861 261 aa13.89□□□□□ -0.19
CTSA-210ENST00000606000 IGFBP4P22692 258 aa13.89□□□□□ -0.19
CTSA-210ENST00000606000 CD52P31358 61 aa13.89□□□□□ -0.19
CTSA-210ENST00000606000 PRKCEQ02156 737 aa13.89□□□□□ -0.19
CTSA-210ENST00000606000 KRT40Q6A162 431 aa13.89□□□□□ -0.19
CTSA-210ENST00000606000 NEK8Q86SG6 692 aa13.89□□□□□ -0.19
CTSA-210ENST00000606000 RSPH3Q86UC2 560 aa13.89□□□□□ -0.19
CTSA-210ENST00000606000 FAM177A1Q8N128 213 aaPredicted RBP13.89□□□□□ -0.19
CTSA-210ENST00000606000 LINC01599Q8WXQ3 324 aa13.89□□□□□ -0.19
CTSA-210ENST00000606000 ARNTL2Q8WYA1 636 aa13.89□□□□□ -0.19
CTSA-210ENST00000606000 TNFRSF25Q93038 417 aa13.89□□□□□ -0.19
CTSA-210ENST00000606000 RIT2Q99578 217 aa13.89□□□□□ -0.19
CTSA-210ENST00000606000 CDHR5Q9HBB8 845 aa13.89□□□□□ -0.19
CTSA-210ENST00000606000 PRDM6Q9NQX0 595 aa13.89□□□□□ -0.19
CTSA-210ENST00000606000 MTUS1Q9ULD2 1270 aa13.89□□□□□ -0.19
CTSA-210ENST00000606000 COL1A2P08123 1366 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms