RNA–Protein interactions for RNA: ENST00000605424.5

MMP28-201, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MMP28, Length 1,928 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-201ENST00000605424 AMPD2Q01433 879 aa21.85■■□□□ 1.09
MMP28-201ENST00000605424 KCNH2Q12809 1159 aa21.85■■□□□ 1.09
MMP28-201ENST00000605424 KCNH7Q9NS40 1196 aa21.85■■□□□ 1.09
MMP28-201ENST00000605424 ZNF112Q9UJU3 913 aa21.85■■□□□ 1.09
MMP28-201ENST00000605424 CTDP1Q9Y5B0 961 aaPredicted RBP21.85■■□□□ 1.09
MMP28-201ENST00000605424 ANO9A1A5B4 782 aa21.84■■□□□ 1.09
MMP28-201ENST00000605424 POTEB2H3BUK9 544 aa21.84■■□□□ 1.09
MMP28-201ENST00000605424 FLOT1O75955 427 aa21.84■■□□□ 1.09
MMP28-201ENST00000605424 NOL4O94818 638 aa21.84■■□□□ 1.09
MMP28-201ENST00000605424 ALAS1P13196 640 aa21.84■■□□□ 1.09
MMP28-201ENST00000605424 VCAM1P19320 739 aa21.84■■□□□ 1.09
MMP28-201ENST00000605424 KIF11P52732 1056 aa21.84■■□□□ 1.09
MMP28-201ENST00000605424 SAMD7Q7Z3H4 446 aa21.84■■□□□ 1.09
MMP28-201ENST00000605424 MYCT1Q8N699 235 aa21.84■■□□□ 1.09
MMP28-201ENST00000605424 JADE2Q9NQC1 790 aa21.84■■□□□ 1.09
MMP28-201ENST00000605424 COL20A1Q9P218 1284 aa21.84■■□□□ 1.09
MMP28-201ENST00000605424 NR3C1P04150 777 aa21.84■■□□□ 1.09
MMP28-201ENST00000605424 EIF4A3P38919 411 aaKnown RBP21.84■■□□□ 1.09
MMP28-201ENST00000605424 SLC9C1Q4G0N8 1177 aa21.84■■□□□ 1.09
MMP28-201ENST00000605424 PAPD7Q5XG87 772 aaKnown RBP21.84■■□□□ 1.09
MMP28-201ENST00000605424 SCYL3Q8IZE3 742 aa21.84■■□□□ 1.09
MMP28-201ENST00000605424 SYTL5Q8TDW5 730 aaPredicted RBP21.84■■□□□ 1.09
MMP28-201ENST00000605424 LXNQ9BS40 222 aa21.84■■□□□ 1.09
MMP28-201ENST00000605424 LSM14BQ9BX40 385 aaKnown RBP21.84■■□□□ 1.09
MMP28-201ENST00000605424 RAVER2Q9HCJ3 691 aaKnown RBP21.84■■□□□ 1.09
MMP28-201ENST00000605424 PLCB1Q9NQ66 1216 aa21.84■■□□□ 1.09
MMP28-201ENST00000605424 TRIM10Q9UDY6 481 aa21.84■■□□□ 1.09
MMP28-201ENST00000605424 ASTN1O14525 1302 aa21.84■■□□□ 1.09
MMP28-201ENST00000605424 AKR1B10O60218 316 aa21.83■■□□□ 1.09
MMP28-201ENST00000605424 AFPP02771 609 aaKnown RBP21.83■■□□□ 1.09
MMP28-201ENST00000605424 SERPING1P05155 500 aa21.83■■□□□ 1.09
MMP28-201ENST00000605424 P4HBP07237 508 aaKnown RBP21.83■■□□□ 1.09
MMP28-201ENST00000605424 EPB41P11171 864 aaKnown RBP21.83■■□□□ 1.09
MMP28-201ENST00000605424 TBC1D10BQ4KMP7 808 aaPredicted RBP21.83■■□□□ 1.09
MMP28-201ENST00000605424 TEX35Q5T0J7 233 aa21.83■■□□□ 1.09
MMP28-201ENST00000605424 SFMBT2Q5VUG0 894 aa21.83■■□□□ 1.09
MMP28-201ENST00000605424 APOBEC3FQ8IUX4 373 aaKnown RBP21.83■■□□□ 1.09
MMP28-201ENST00000605424 CPXCR1Q8N123 301 aa21.83■■□□□ 1.09
MMP28-201ENST00000605424 CCDC155Q8N6L0 562 aa21.83■■□□□ 1.09
MMP28-201ENST00000605424 IFIH1Q9BYX4 1025 aaKnown RBP21.83■■□□□ 1.09
MMP28-201ENST00000605424 LACRTQ9GZZ8 138 aa21.83■■□□□ 1.09
MMP28-201ENST00000605424 TBC1D22BQ9NU19 505 aa21.83■■□□□ 1.09
MMP28-201ENST00000605424 PCDHA13Q9Y5I0 950 aa21.83■■□□□ 1.09
MMP28-201ENST00000605424 DOCK1Q14185 1865 aa21.83■■□□□ 1.08
MMP28-201ENST00000605424 ZNF263O14978 683 aa21.82■■□□□ 1.08
MMP28-201ENST00000605424 XRCC5P13010 732 aaKnown RBP21.82■■□□□ 1.08
MMP28-201ENST00000605424 ERCC3P19447 782 aa21.82■■□□□ 1.08
MMP28-201ENST00000605424 CLCN6P51797 869 aa21.82■■□□□ 1.08
MMP28-201ENST00000605424 MTMR2Q13614 643 aa21.82■■□□□ 1.08
MMP28-201ENST00000605424 ASTE1Q2TB18 679 aaPredicted RBP21.82■■□□□ 1.08
MMP28-201ENST00000605424 TKFCQ3LXA3 575 aa21.82■■□□□ 1.08
MMP28-201ENST00000605424 TRAPPC11Q7Z392 1133 aa21.82■■□□□ 1.08
MMP28-201ENST00000605424 MIER3Q7Z3K6 550 aa21.82■■□□□ 1.08
MMP28-201ENST00000605424 RPAP3Q9H6T3 665 aaPredicted RBP21.82■■□□□ 1.08
MMP28-201ENST00000605424 ZSWIM4Q9H7M6 989 aa21.82■■□□□ 1.08
MMP28-201ENST00000605424 AGO4Q9HCK5 861 aaKnown RBP21.82■■□□□ 1.08
MMP28-201ENST00000605424 SCAF8Q9UPN6 1271 aaKnown RBP21.82■■□□□ 1.08
MMP28-201ENST00000605424 GJA3Q9Y6H8 435 aa21.82■■□□□ 1.08
MMP28-201ENST00000605424 RBAK-RBAKDNI3L0D1 243 aa21.82■■□□□ 1.08
MMP28-201ENST00000605424 PLEKP08567 350 aaPredicted RBP21.82■■□□□ 1.08
MMP28-201ENST00000605424 BACE1P56817 501 aa21.82■■□□□ 1.08
MMP28-201ENST00000605424 BMS1Q14692 1282 aaKnown RBP21.82■■□□□ 1.08
MMP28-201ENST00000605424 NBPF12Q5TAG4 269 aaPredicted RBP21.82■■□□□ 1.08
MMP28-201ENST00000605424 XRRA1Q6P2D8 792 aa21.82■■□□□ 1.08
MMP28-201ENST00000605424 TMCO3Q6UWJ1 677 aa21.82■■□□□ 1.08
MMP28-201ENST00000605424 TRIM58Q8NG06 486 aa21.82■■□□□ 1.08
MMP28-201ENST00000605424 SECISBP2LQ93073 1101 aaKnown RBP21.82■■□□□ 1.08
MMP28-201ENST00000605424 MKNK1Q9BUB5 465 aa21.82■■□□□ 1.08
MMP28-201ENST00000605424 LUC7LQ9NQ29 371 aaKnown RBP21.82■■□□□ 1.08
MMP28-201ENST00000605424 AIPL1Q9NZN9 384 aa21.82■■□□□ 1.08
MMP28-201ENST00000605424 PCDHB13Q9Y5F0 798 aa21.82■■□□□ 1.08
MMP28-201ENST00000605424 CTAGE15A4D2H0 777 aa21.81■■□□□ 1.08
MMP28-201ENST00000605424 ARHGEF35A5YM69 484 aa21.81■■□□□ 1.08
MMP28-201ENST00000605424 RCCD1A6NED2 376 aa21.81■■□□□ 1.08
MMP28-201ENST00000605424 DHX15O43143 795 aaKnown RBP21.81■■□□□ 1.08
MMP28-201ENST00000605424 PJA2O43164 708 aa21.81■■□□□ 1.08
MMP28-201ENST00000605424 ATP8B1O43520 1251 aa21.81■■□□□ 1.08
MMP28-201ENST00000605424 LYPLA2O95372 231 aa21.81■■□□□ 1.08
MMP28-201ENST00000605424 CTAGE8P0CG41 777 aa21.81■■□□□ 1.08
MMP28-201ENST00000605424 POLR2FP61218 127 aaKnown RBP21.81■■□□□ 1.08
MMP28-201ENST00000605424 CYP27A1Q02318 531 aa21.81■■□□□ 1.08
MMP28-201ENST00000605424 HGSNATQ68CP4 663 aa21.81■■□□□ 1.08
MMP28-201ENST00000605424 ZNF720Q7Z2F6 126 aa21.81■■□□□ 1.08
MMP28-201ENST00000605424 CTAGE6Q86UF2 777 aa21.81■■□□□ 1.08
MMP28-201ENST00000605424 CTAGE4Q8IX94 777 aa21.81■■□□□ 1.08
MMP28-201ENST00000605424 GOLGA5Q8TBA6 731 aa21.81■■□□□ 1.08
MMP28-201ENST00000605424 WRAP73Q9P2S5 460 aaPredicted RBP21.81■■□□□ 1.08
MMP28-201ENST00000605424 DBR1Q9UK59 544 aaKnown RBP21.81■■□□□ 1.08
MMP28-201ENST00000605424 GTPBP10A4D1E9 387 aaKnown RBP21.8■■□□□ 1.08
MMP28-201ENST00000605424 TGFB1I1O43294 461 aa21.8■■□□□ 1.08
MMP28-201ENST00000605424 PPP1R12BO60237 982 aaPredicted RBP21.8■■□□□ 1.08
MMP28-201ENST00000605424 AKAP3O75969 853 aa21.8■■□□□ 1.08
MMP28-201ENST00000605424 TUBBP07437 444 aa21.8■■□□□ 1.08
MMP28-201ENST00000605424 MUM1L1Q5H9M0 696 aa21.8■■□□□ 1.08
MMP28-201ENST00000605424 SLC30A10Q6XR72 485 aa21.8■■□□□ 1.08
MMP28-201ENST00000605424 FAM178BQ8IXR5 827 aa21.8■■□□□ 1.08
MMP28-201ENST00000605424 ZNF280CQ8ND82 737 aa21.8■■□□□ 1.08
MMP28-201ENST00000605424 C12orf42Q96LP6 360 aa21.8■■□□□ 1.08
MMP28-201ENST00000605424 FIZ1Q96SL8 496 aa21.8■■□□□ 1.08
MMP28-201ENST00000605424 MAF1Q9H063 256 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms