RNA–Protein interactions for RNA: ENST00000604740.5

LAMA4-222, Transcript of laminin subunit alpha 4, human

TSL 2

Gene LAMA4, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LAMA4-222	ENST00000604740	KCNQ1	P51787	676 aa		5.91	□□□□□ -1.46
LAMA4-222	ENST00000604740	IL13RA1	P78552	427 aa		5.91	□□□□□ -1.46
LAMA4-222	ENST00000604740	KLF10	Q13118	480 aa		5.91	□□□□□ -1.46
LAMA4-222	ENST00000604740	NOLC1	Q14978	699 aa	Known RBP eCLIP	5.91	□□□□□ -1.46
LAMA4-222	ENST00000604740	CRY1	Q16526	586 aa		5.91	□□□□□ -1.46
LAMA4-222	ENST00000604740	NRN1L	Q496H8	165 aa		5.91	□□□□□ -1.46
LAMA4-222	ENST00000604740	FAM209A	Q5JX71	171 aa		5.91	□□□□□ -1.46
LAMA4-222	ENST00000604740	OSTM1	Q86WC4	334 aa		5.91	□□□□□ -1.46
LAMA4-222	ENST00000604740	PCED1A	Q9H1Q7	454 aa		5.91	□□□□□ -1.46
LAMA4-222	ENST00000604740	INCENP	Q9NQS7	918 aa		5.91	□□□□□ -1.46
LAMA4-222	ENST00000604740	PPP1R1B	Q9UD71	204 aa	Predicted RBP	5.91	□□□□□ -1.46
LAMA4-222	ENST00000604740	NR2E1	Q9Y466	385 aa		5.91	□□□□□ -1.46
LAMA4-222	ENST00000604740	ABCC9	O60706	1549 aa		5.9	□□□□□ -1.46
LAMA4-222	ENST00000604740	ARVCF	O00192	962 aa		5.9	□□□□□ -1.46
LAMA4-222	ENST00000604740	KCNK3	O14649	394 aa		5.9	□□□□□ -1.46
LAMA4-222	ENST00000604740	WNT9A	O14904	365 aa		5.9	□□□□□ -1.46
LAMA4-222	ENST00000604740	RAD17	O75943	681 aa		5.9	□□□□□ -1.46
LAMA4-222	ENST00000604740	C6orf222	P0C671	652 aa	Predicted RBP	5.9	□□□□□ -1.46
LAMA4-222	ENST00000604740	NAT1	P18440	290 aa		5.9	□□□□□ -1.46
LAMA4-222	ENST00000604740	JAM2	P57087	298 aa		5.9	□□□□□ -1.46
LAMA4-222	ENST00000604740	RASGRF1	Q13972	1273 aa		5.9	□□□□□ -1.46
LAMA4-222	ENST00000604740	USP39	Q53GS9	565 aa	Known RBP	5.9	□□□□□ -1.46
LAMA4-222	ENST00000604740	FOXB2	Q5VYV0	432 aa		5.9	□□□□□ -1.46
LAMA4-222	ENST00000604740	RNF207	Q6ZRF8	634 aa		5.9	□□□□□ -1.46
LAMA4-222	ENST00000604740	SCYL1	Q96KG9	808 aa		5.9	□□□□□ -1.46
LAMA4-222	ENST00000604740	OR14A2	Q96R54	314 aa		5.9	□□□□□ -1.46
LAMA4-222	ENST00000604740	KIAA1683	Q9H0B3	1180 aa		5.9	□□□□□ -1.46
LAMA4-222	ENST00000604740	C12orf65	Q9H3J6	166 aa	Known RBP	5.9	□□□□□ -1.46
LAMA4-222	ENST00000604740	CCDC66	A2RUB6	948 aa		5.89	□□□□□ -1.47
LAMA4-222	ENST00000604740	NPIPB8	E9PQR5	432 aa		5.89	□□□□□ -1.47
LAMA4-222	ENST00000604740	ACO1	P21399	889 aa	Known RBP	5.89	□□□□□ -1.47
LAMA4-222	ENST00000604740	AOAH	P28039	575 aa		5.89	□□□□□ -1.47
LAMA4-222	ENST00000604740	DNM2	P50570	870 aa		5.89	□□□□□ -1.47
LAMA4-222	ENST00000604740	FOXE3	Q13461	319 aa		5.89	□□□□□ -1.47
LAMA4-222	ENST00000604740	FAM47C	Q5HY64	1035 aa		5.89	□□□□□ -1.47
LAMA4-222	ENST00000604740	AGBL4	Q5VU57	503 aa		5.89	□□□□□ -1.47
LAMA4-222	ENST00000604740	C16orf59	Q7L2K0	433 aa		5.89	□□□□□ -1.47
LAMA4-222	ENST00000604740	OTOP2	Q7RTS6	562 aa		5.89	□□□□□ -1.47
LAMA4-222	ENST00000604740	ZC3H7A	Q8IWR0	971 aa	Known RBP	5.89	□□□□□ -1.47
LAMA4-222	ENST00000604740	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	5.89	□□□□□ -1.47
LAMA4-222	ENST00000604740	EDA	Q92838	391 aa		5.89	□□□□□ -1.47
LAMA4-222	ENST00000604740	ZDHHC5	Q9C0B5	715 aa		5.89	□□□□□ -1.47
LAMA4-222	ENST00000604740	GALNT8	Q9NY28	637 aa		5.89	□□□□□ -1.47
LAMA4-222	ENST00000604740	ING1	Q9UK53	422 aa	Predicted RBP	5.89	□□□□□ -1.47
LAMA4-222	ENST00000604740	FBXO10	Q9UK96	956 aa		5.89	□□□□□ -1.47
LAMA4-222	ENST00000604740	PCDHA9	Q9Y5H5	950 aa		5.89	□□□□□ -1.47
LAMA4-222	ENST00000604740	ZNF561-AS1	K7EIQ3	104 aa		5.88	□□□□□ -1.47
LAMA4-222	ENST00000604740	GSTA4	O15217	222 aa		5.88	□□□□□ -1.47
LAMA4-222	ENST00000604740	DIAPH1	O60610	1272 aa	Known RBP	5.88	□□□□□ -1.47
LAMA4-222	ENST00000604740	C4BPA	P04003	597 aa	Known RBP	5.88	□□□□□ -1.47
LAMA4-222	ENST00000604740	GABRE	P78334	506 aa		5.88	□□□□□ -1.47
LAMA4-222	ENST00000604740	POLN	Q7Z5Q5	900 aa		5.88	□□□□□ -1.47
LAMA4-222	ENST00000604740	CISD2	Q8N5K1	135 aa	Known RBP	5.88	□□□□□ -1.47
LAMA4-222	ENST00000604740	EXOC2	Q96KP1	924 aa		5.88	□□□□□ -1.47
LAMA4-222	ENST00000604740	MENT	Q9BUN1	341 aa		5.88	□□□□□ -1.47
LAMA4-222	ENST00000604740	PLA2G12B	Q9BX93	195 aa		5.88	□□□□□ -1.47
LAMA4-222	ENST00000604740	CSRNP2	Q9H175	543 aa		5.88	□□□□□ -1.47
LAMA4-222	ENST00000604740	PUF60	Q9UHX1	559 aa	Known RBP	5.88	□□□□□ -1.47
LAMA4-222	ENST00000604740	CDC42EP3	Q9UKI2	254 aa		5.88	□□□□□ -1.47
LAMA4-222	ENST00000604740	SLC30A1	Q9Y6M5	507 aa		5.88	□□□□□ -1.47
LAMA4-222	ENST00000604740	MATN2	O00339	956 aa		5.87	□□□□□ -1.47
LAMA4-222	ENST00000604740	ARHGAP6	O43182	974 aa		5.87	□□□□□ -1.47
LAMA4-222	ENST00000604740	CLASP2	O75122	1294 aa	Known RBP	5.87	□□□□□ -1.47
LAMA4-222	ENST00000604740	CRTAM	O95727	393 aa		5.87	□□□□□ -1.47
LAMA4-222	ENST00000604740	HERVK_113	P62684	666 aa		5.87	□□□□□ -1.47
LAMA4-222	ENST00000604740	TBR1	Q16650	682 aa		5.87	□□□□□ -1.47
LAMA4-222	ENST00000604740	MIIP	Q5JXC2	388 aa		5.87	□□□□□ -1.47
LAMA4-222	ENST00000604740	KRTAP5-3	Q6L8H2	238 aa		5.87	□□□□□ -1.47
LAMA4-222	ENST00000604740	LARP4	Q71RC2	724 aa	Known RBP eCLIP	5.87	□□□□□ -1.47
LAMA4-222	ENST00000604740	CXXC5	Q7LFL8	322 aa	Known RBP	5.87	□□□□□ -1.47
LAMA4-222	ENST00000604740	WDR48	Q8TAF3	677 aa		5.87	□□□□□ -1.47
LAMA4-222	ENST00000604740	EXTL1	Q92935	676 aa		5.87	□□□□□ -1.47
LAMA4-222	ENST00000604740	SLITRK6	Q9H5Y7	841 aa		5.87	□□□□□ -1.47
LAMA4-222	ENST00000604740	SMURF1	Q9HCE7	757 aa		5.87	□□□□□ -1.47
LAMA4-222	ENST00000604740	UCKL1	Q9NWZ5	548 aa		5.87	□□□□□ -1.47
LAMA4-222	ENST00000604740	BTBD7	Q9P203	1132 aa		5.87	□□□□□ -1.47
LAMA4-222	ENST00000604740	OVOL3	O00110	214 aa		5.86	□□□□□ -1.47
LAMA4-222	ENST00000604740	FAM153B	P0C7A2	387 aa		5.86	□□□□□ -1.47
LAMA4-222	ENST00000604740	NFYC	Q13952	458 aa		5.86	□□□□□ -1.47
LAMA4-222	ENST00000604740	LRSAM1	Q6UWE0	723 aa		5.86	□□□□□ -1.47
LAMA4-222	ENST00000604740		Q6ZSN1	163 aa		5.86	□□□□□ -1.47
LAMA4-222	ENST00000604740	ZNF503	Q96F45	646 aa		5.86	□□□□□ -1.47
LAMA4-222	ENST00000604740	FAM89A	Q96GI7	184 aa		5.86	□□□□□ -1.47
LAMA4-222	ENST00000604740	WNK4	Q96J92	1243 aa		5.86	□□□□□ -1.47
LAMA4-222	ENST00000604740	BTBD2	Q9BX70	525 aa		5.86	□□□□□ -1.47
LAMA4-222	ENST00000604740	CCDC113	Q9H0I3	377 aa		5.86	□□□□□ -1.47
LAMA4-222	ENST00000604740	MRPS23	Q9Y3D9	190 aa	Known RBP	5.86	□□□□□ -1.47
LAMA4-222	ENST00000604740	SCD	O00767	359 aa		5.85	□□□□□ -1.47
LAMA4-222	ENST00000604740	ZNF202	O95125	648 aa		5.85	□□□□□ -1.47
LAMA4-222	ENST00000604740	MPIG6B	O95866	241 aa		5.85	□□□□□ -1.47
LAMA4-222	ENST00000604740	APP	P05067	770 aa		5.85	□□□□□ -1.47
LAMA4-222	ENST00000604740	MME	P08473	750 aa		5.85	□□□□□ -1.47
LAMA4-222	ENST00000604740	RPS19	P39019	145 aa	Known RBP	5.85	□□□□□ -1.47
LAMA4-222	ENST00000604740	ECE1	P42892	770 aa		5.85	□□□□□ -1.47
LAMA4-222	ENST00000604740	MEOX1	P50221	254 aa		5.85	□□□□□ -1.47
LAMA4-222	ENST00000604740	ZC3H6	P61129	1189 aa	Known RBP	5.85	□□□□□ -1.47
LAMA4-222	ENST00000604740	CD83	Q01151	205 aa		5.85	□□□□□ -1.47
LAMA4-222	ENST00000604740	PTH1R	Q03431	593 aa		5.85	□□□□□ -1.47
LAMA4-222	ENST00000604740	DUSP8	Q13202	625 aa		5.85	□□□□□ -1.47
LAMA4-222	ENST00000604740	FHL2	Q14192	279 aa		5.85	□□□□□ -1.47

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