RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 PTPN18Q99952 460 aa13.63□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 XPO4Q9C0E2 1151 aaKnown RBP13.63□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 GPBP1L1Q9HC44 474 aaPredicted RBP13.63□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 VTA1Q9NP79 307 aa13.63□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 SLC5A4Q9NY91 659 aa13.63□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 KCNG1Q9UIX4 513 aa13.63□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 ZSWIM8A7E2V4 1837 aa13.62□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 SLC15A5A6NIM6 579 aa13.62□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 DDX39AO00148 427 aaKnown RBP13.62□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 PTMAP06454 111 aaKnown RBP13.62□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 SUPT20HL2P0C7V6 817 aa13.62□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 ATP1A3P13637 1013 aa13.62□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 CDK11BP21127 795 aaKnown RBP13.62□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 YWHABP31946 246 aaKnown RBP13.62□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 ACTR2P61160 394 aa13.62□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 NFIL3Q16649 462 aa13.62□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 EDRF1Q3B7T1 1238 aa13.62□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 ZCWPW2Q504Y3 356 aa13.62□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 HERC4Q5GLZ8 1057 aaPredicted RBP13.62□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 APTXQ7Z2E3 356 aaKnown RBP13.62□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 ZC3H3Q8IXZ2 948 aaKnown RBP13.62□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 ANKRD13CQ8N6S4 541 aa13.62□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 BANK1Q8NDB2 785 aa13.62□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 AFAP1L1Q8TED9 768 aa13.62□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 TMEM174Q8WUU8 243 aa13.62□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 KCNN1Q92952 543 aa13.62□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 TRIM47Q96LD4 638 aa13.62□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 DRC1Q96MC2 740 aa13.62□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 UIMC1Q96RL1 719 aa13.62□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 RUSC1Q9BVN2 902 aa13.62□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 PORCNQ9H237 461 aa13.62□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 C17orf75Q9HAS0 396 aa13.62□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 PARVGQ9HBI0 331 aa13.62□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 SLC39A2Q9NP94 309 aa13.62□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 IFNKQ9P0W0 207 aa13.62□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 WRAP73Q9P2S5 460 aaPredicted RBP13.62□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 SYNGAP1Q96PV0 1343 aa13.62□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 RBM47A0AV96 593 aaKnown RBP13.61□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 FARP2O94887 1054 aaPredicted RBP13.61□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 FAM13AO94988 1023 aa13.61□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 UBA1P22314 1058 aaKnown RBP13.61□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 RTP1P59025 263 aa13.61□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 TCP11X2Q5H9J9 407 aa13.61□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 PADI6Q6TGC4 694 aa13.61□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 PLEKHH3Q7Z736 793 aa13.61□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 CSGALNACT2Q8N6G5 542 aa13.61□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 PIGOQ8TEQ8 1089 aa13.61□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 SCFD2Q8WU76 684 aa13.61□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 ZFP91Q96JP5 570 aaPredicted RBP13.61□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 CEP63Q96MT8 703 aa13.61□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 DUSP9Q99956 384 aaKnown RBP13.61□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 ST6GALNAC4Q9H4F1 302 aa13.61□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 EFCC1Q9HA90 598 aa13.61□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 SAMSN1Q9NSI8 373 aaKnown RBP13.61□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 LARSQ9P2J5 1176 aaKnown RBP13.61□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 TRAF3IP3Q9Y228 551 aa13.61□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 MAFBQ9Y5Q3 323 aaPredicted RBP13.61□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 ITIH6Q6UXX5 1313 aa13.61□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 FAM155AB1AL88 458 aaPredicted RBP13.6□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 KCNJ18B7U540 433 aa13.6□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 KIF3CO14782 793 aa13.6□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 GNA14O95837 355 aa13.6□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 ADORA2AP29274 412 aa13.6□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 TM4SF4P48230 202 aa13.6□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 SLC26A2P50443 739 aa13.6□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 MARSP56192 900 aaKnown RBP13.6□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 STX17P56962 302 aa13.6□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 SNRPFP62306 86 aaKnown RBP13.6□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 FSTL1Q12841 308 aa13.6□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 KCNJ12Q14500 433 aa13.6□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 TTLL4Q14679 1199 aa13.6□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 XKR3Q5GH77 459 aa13.6□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 FAM160B1Q5W0V3 765 aa13.6□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 GPR142Q7Z601 462 aa13.6□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 ZSCAN30Q86W11 494 aa13.6□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 IFNL1Q8IU54 200 aa13.6□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 VSTM4Q8IW00 320 aa13.6□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 EXOC8Q8IYI6 725 aa13.6□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 CCDC150Q8NCX0 1101 aa13.6□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 MCPH1Q8NEM0 835 aa13.6□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 ZNF507Q8TCN5 953 aa13.6□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 ZNF526Q8TF50 670 aaPredicted RBP13.6□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 HVCN1Q96D96 273 aa13.6□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 FAM167AQ96KS9 214 aa13.6□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 CCDC43Q96MW1 224 aaKnown RBP13.6□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 PKD2L1Q9P0L9 805 aa13.6□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 CGNQ9P2M7 1197 aaKnown RBP13.6□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 MAGEC2Q9UBF1 373 aaPredicted RBP13.6□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 DDX41Q9UJV9 622 aaKnown RBP13.6□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 EMSYQ7Z589 1322 aa13.6□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 TMEM88BA6NKF7 163 aa13.59□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 IGF2BP3O00425 579 aaKnown RBP eCLIP13.59□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 PDXKO00764 312 aa13.59□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 TLR2O60603 784 aa13.59□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 PEX10O60683 326 aa13.59□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 DGAT1O75907 488 aa13.59□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 ALDH1A1P00352 501 aa13.59□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 PGK2P07205 417 aa13.59□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 TPM2P07951 284 aa13.59□□□□□ -0.23
NEDD8-MDP1-203ENST00000604306 HOXC6P09630 235 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms