RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 FSCBQ5H9T9 825 aa22.65■■□□□ 1.22
SH3D19-211ENST00000604030 KRT38O76015 456 aa22.65■■□□□ 1.22
SH3D19-211ENST00000604030 GPC5P78333 572 aa22.65■■□□□ 1.22
SH3D19-211ENST00000604030 BBS9Q3SYG4 887 aa22.65■■□□□ 1.22
SH3D19-211ENST00000604030 DCAF4Q8WV16 495 aa22.65■■□□□ 1.22
SH3D19-211ENST00000604030 TBRG4Q969Z0 631 aaKnown RBP eCLIP22.65■■□□□ 1.222e-6■■■■■ 34.7
SH3D19-211ENST00000604030 ELAC2Q9BQ52 826 aaKnown RBP22.65■■□□□ 1.22
SH3D19-211ENST00000604030 SNX25Q9H3E2 840 aa22.65■■□□□ 1.22
SH3D19-211ENST00000604030 TCP10L2B9ZVM9 353 aa22.64■■□□□ 1.22
SH3D19-211ENST00000604030 TOM1L1O75674 476 aa22.64■■□□□ 1.22
SH3D19-211ENST00000604030 ZNF189O75820 626 aaPredicted RBP22.64■■□□□ 1.22
SH3D19-211ENST00000604030 TBC1D9BQ66K14 1250 aa22.64■■□□□ 1.22
SH3D19-211ENST00000604030 PI4KBQ9UBF8 816 aa22.64■■□□□ 1.22
SH3D19-211ENST00000604030 ZBTB1Q9Y2K1 713 aa22.64■■□□□ 1.22
SH3D19-211ENST00000604030 CTIFO43310 598 aaKnown RBP22.64■■□□□ 1.21
SH3D19-211ENST00000604030 MDM2Q00987 491 aaPredicted RBP22.64■■□□□ 1.21
SH3D19-211ENST00000604030 MYO1EQ12965 1108 aa22.64■■□□□ 1.21
SH3D19-211ENST00000604030 USPL1Q5W0Q7 1092 aa22.64■■□□□ 1.21
SH3D19-211ENST00000604030 CCDC138Q96M89 665 aa22.64■■□□□ 1.21
SH3D19-211ENST00000604030 METP08581 1390 aa22.64■■□□□ 1.21
SH3D19-211ENST00000604030 ZBED1O96006 694 aa22.64■■□□□ 1.21
SH3D19-211ENST00000604030 TEDDM1Q5T9Z0 273 aa22.64■■□□□ 1.21
SH3D19-211ENST00000604030 FOXP4Q8IVH2 680 aaPredicted RBP22.64■■□□□ 1.21
SH3D19-211ENST00000604030 GDAQ9Y2T3 454 aa22.64■■□□□ 1.21
SH3D19-211ENST00000604030 ANGPTL3Q9Y5C1 460 aa22.64■■□□□ 1.21
SH3D19-211ENST00000604030 GOLGA8SH3BPF8 625 aa22.64■■□□□ 1.21
SH3D19-211ENST00000604030 PPEF1O14829 653 aaPredicted RBP22.64■■□□□ 1.21
SH3D19-211ENST00000604030 LPXNO60711 386 aa22.64■■□□□ 1.21
SH3D19-211ENST00000604030 TBC1D1Q86TI0 1168 aaPredicted RBP22.64■■□□□ 1.21
SH3D19-211ENST00000604030 KLC2Q9H0B6 622 aa22.64■■□□□ 1.21
SH3D19-211ENST00000604030 SEL1LQ9UBV2 794 aa22.64■■□□□ 1.21
SH3D19-211ENST00000604030 TBK1Q9UHD2 729 aa22.64■■□□□ 1.21
SH3D19-211ENST00000604030 ATP8B3O60423 1300 aa22.63■■□□□ 1.21
SH3D19-211ENST00000604030 GGCXP38435 758 aa22.63■■□□□ 1.21
SH3D19-211ENST00000604030 RASGRF1Q13972 1273 aa22.63■■□□□ 1.21
SH3D19-211ENST00000604030 RPS6KC1Q96S38 1066 aa22.63■■□□□ 1.21
SH3D19-211ENST00000604030 OSBPL9Q96SU4 736 aa22.63■■□□□ 1.21
SH3D19-211ENST00000604030 BSDC1Q9NW68 430 aaPredicted RBP22.63■■□□□ 1.21
SH3D19-211ENST00000604030 TADA3O75528 432 aa22.63■■□□□ 1.21
SH3D19-211ENST00000604030 MB21D2Q8IYB1 491 aaPredicted RBP22.63■■□□□ 1.21
SH3D19-211ENST00000604030 AIFM3Q96NN9 605 aa22.63■■□□□ 1.21
SH3D19-211ENST00000604030 CALN1Q9BXU9 219 aa22.63■■□□□ 1.21
SH3D19-211ENST00000604030 SLC12A6Q9UHW9 1150 aa22.63■■□□□ 1.21
SH3D19-211ENST00000604030 DNAJC12Q9UKB3 198 aa22.63■■□□□ 1.21
SH3D19-211ENST00000604030 ARID5BQ14865 1188 aa22.63■■□□□ 1.21
SH3D19-211ENST00000604030 KCTD1Q719H9 257 aa22.63■■□□□ 1.21
SH3D19-211ENST00000604030 TAB3Q8N5C8 712 aaPredicted RBP22.63■■□□□ 1.21
SH3D19-211ENST00000604030 GDAP1Q8TB36 358 aa22.63■■□□□ 1.21
SH3D19-211ENST00000604030 COA7Q96BR5 231 aa22.63■■□□□ 1.21
SH3D19-211ENST00000604030 GOLPH3LQ9H4A5 285 aa22.63■■□□□ 1.21
SH3D19-211ENST00000604030 TAF1DQ9H5J8 278 aaPredicted RBP22.63■■□□□ 1.21
SH3D19-211ENST00000604030 INPP1P49441 399 aa22.63■■□□□ 1.21
SH3D19-211ENST00000604030 JAK3P52333 1124 aa22.63■■□□□ 1.21
SH3D19-211ENST00000604030 LRRC23Q53EV4 343 aaPredicted RBP22.63■■□□□ 1.21
SH3D19-211ENST00000604030 GUF1Q8N442 669 aaKnown RBP22.63■■□□□ 1.21
SH3D19-211ENST00000604030 ERBB3P21860 1342 aa22.62■■□□□ 1.21
SH3D19-211ENST00000604030 FRMD3A2A2Y4 597 aa22.62■■□□□ 1.21
SH3D19-211ENST00000604030 APOEP02649 317 aa22.62■■□□□ 1.21
SH3D19-211ENST00000604030 DEPDC1BQ8WUY9 529 aa22.62■■□□□ 1.21
SH3D19-211ENST00000604030 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.62■■□□□ 1.219e-7■□□□□ 9.8
SH3D19-211ENST00000604030 NOC2LQ9Y3T9 749 aaKnown RBP22.62■■□□□ 1.21
SH3D19-211ENST00000604030 GNGT2O14610 69 aa22.62■■□□□ 1.21
SH3D19-211ENST00000604030 CCNA1P78396 465 aa22.62■■□□□ 1.21
SH3D19-211ENST00000604030 CACNB1Q02641 598 aaPredicted RBP22.62■■□□□ 1.21
SH3D19-211ENST00000604030 KCTD2Q14681 263 aa22.62■■□□□ 1.21
SH3D19-211ENST00000604030 PTPN21Q16825 1174 aa22.62■■□□□ 1.21
SH3D19-211ENST00000604030 KLC3Q6P597 504 aa22.62■■□□□ 1.21
SH3D19-211ENST00000604030 RNF207Q6ZRF8 634 aa22.62■■□□□ 1.21
SH3D19-211ENST00000604030 FAM20AQ96MK3 541 aa22.62■■□□□ 1.21
SH3D19-211ENST00000604030 PCIF1Q9H4Z3 704 aa22.62■■□□□ 1.21
SH3D19-211ENST00000604030 MX2P20592 715 aa22.62■■□□□ 1.21
SH3D19-211ENST00000604030 CDC25AP30304 524 aa22.62■■□□□ 1.21
SH3D19-211ENST00000604030 IQCB1Q15051 598 aa22.62■■□□□ 1.21
SH3D19-211ENST00000604030 CCNYQ8ND76 341 aa22.62■■□□□ 1.21
SH3D19-211ENST00000604030 ATP6V1G3Q96LB4 118 aa22.62■■□□□ 1.21
SH3D19-211ENST00000604030 PAGR1Q9BTK6 254 aa22.62■■□□□ 1.21
SH3D19-211ENST00000604030 SMYD2Q9NRG4 433 aa22.62■■□□□ 1.21
SH3D19-211ENST00000604030 DONSONQ9NYP3 566 aa22.62■■□□□ 1.21
SH3D19-211ENST00000604030 METTL23Q86XA0 190 aa22.62■■□□□ 1.21
SH3D19-211ENST00000604030 RAD54LQ92698 747 aa22.62■■□□□ 1.21
SH3D19-211ENST00000604030 FAM149B1Q96BN6 582 aa22.62■■□□□ 1.21
SH3D19-211ENST00000604030 TSC22D3Q99576 134 aa22.62■■□□□ 1.21
SH3D19-211ENST00000604030 COPEO14579 308 aa22.61■■□□□ 1.21
SH3D19-211ENST00000604030 ZRANB2O95218 330 aaKnown RBP eCLIP22.61■■□□□ 1.21
SH3D19-211ENST00000604030 COG1Q8WTW3 980 aa22.61■■□□□ 1.21
SH3D19-211ENST00000604030 LAMC1P11047 1609 aa22.61■■□□□ 1.21
SH3D19-211ENST00000604030 CHEK2O96017 543 aa22.61■■□□□ 1.21
SH3D19-211ENST00000604030 PMS2P54278 862 aa22.61■■□□□ 1.21
SH3D19-211ENST00000604030 KCNB1Q14721 858 aa22.61■■□□□ 1.21
SH3D19-211ENST00000604030 KIFC3Q9BVG8 833 aa22.61■■□□□ 1.21
SH3D19-211ENST00000604030 STRIP2Q9ULQ0 834 aa22.61■■□□□ 1.21
SH3D19-211ENST00000604030 LRRC53A6NM62 1247 aa22.61■■□□□ 1.21
SH3D19-211ENST00000604030 HNRNPCL1O60812 293 aaKnown RBP22.61■■□□□ 1.21
SH3D19-211ENST00000604030 GIPC2Q8TF65 315 aa22.61■■□□□ 1.21
SH3D19-211ENST00000604030 CALB1P05937 261 aa22.61■■□□□ 1.21
SH3D19-211ENST00000604030 CDK8P49336 464 aa22.61■■□□□ 1.21
SH3D19-211ENST00000604030 DHX34Q14147 1143 aaKnown RBP22.61■■□□□ 1.21
SH3D19-211ENST00000604030 USP17L2Q6R6M4 530 aa22.61■■□□□ 1.21
SH3D19-211ENST00000604030 ARMCX2Q7L311 632 aa22.61■■□□□ 1.21
SH3D19-211ENST00000604030 ERICH1Q86X53 443 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms