RNA–Protein interactions for RNA: ENST00000603451.1

SQSTM1P1-201, Transcript of sequestosome 1 pseudogene 1, humanhuman

BASIC

Gene SQSTM1P1, Length 859 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1P1-201ENST00000603451 FAM47CQ5HY64 1035 aa10.63□□□□□ -0.71
SQSTM1P1-201ENST00000603451 SERINC5Q86VE9 423 aa10.63□□□□□ -0.71
SQSTM1P1-201ENST00000603451 CKAP2LQ8IYA6 745 aa10.63□□□□□ -0.71
SQSTM1P1-201ENST00000603451 EIF2AK1Q9BQI3 630 aaKnown RBP10.63□□□□□ -0.71
SQSTM1P1-201ENST00000603451 JPH2Q9BR39 696 aaPredicted RBP10.63□□□□□ -0.71
SQSTM1P1-201ENST00000603451 LXNQ9BS40 222 aa10.63□□□□□ -0.71
SQSTM1P1-201ENST00000603451 NT5C3AQ9H0P0 336 aa10.63□□□□□ -0.71
SQSTM1P1-201ENST00000603451 PRKAG2Q9UGJ0 569 aa10.63□□□□□ -0.71
SQSTM1P1-201ENST00000603451 TUBE1Q9UJT0 475 aa10.63□□□□□ -0.71
SQSTM1P1-201ENST00000603451 TBX21Q9UL17 535 aa10.63□□□□□ -0.71
SQSTM1P1-201ENST00000603451 TRPC6Q9Y210 931 aa10.63□□□□□ -0.71
SQSTM1P1-201ENST00000603451 NOD1Q9Y239 953 aa10.63□□□□□ -0.71
SQSTM1P1-201ENST00000603451 ATP11BQ9Y2G3 1177 aa10.63□□□□□ -0.71
SQSTM1P1-201ENST00000603451 EML1O00423 815 aa10.62□□□□□ -0.71
SQSTM1P1-201ENST00000603451 KIAA0355O15063 1070 aa10.62□□□□□ -0.71
SQSTM1P1-201ENST00000603451 MAGEB2O15479 319 aa10.62□□□□□ -0.71
SQSTM1P1-201ENST00000603451 ZNF862O60290 1169 aa10.62□□□□□ -0.71
SQSTM1P1-201ENST00000603451 B4GALT4O60513 344 aa10.62□□□□□ -0.71
SQSTM1P1-201ENST00000603451 PQBP1O60828 265 aaKnown RBP10.62□□□□□ -0.71
SQSTM1P1-201ENST00000603451 TECP42680 631 aa10.62□□□□□ -0.71
SQSTM1P1-201ENST00000603451 KRT85P78386 507 aa10.62□□□□□ -0.71
SQSTM1P1-201ENST00000603451 TLE2Q04725 743 aa10.62□□□□□ -0.71
SQSTM1P1-201ENST00000603451 BFSP2Q13515 415 aa10.62□□□□□ -0.71
SQSTM1P1-201ENST00000603451 PKP1Q13835 747 aa10.62□□□□□ -0.71
SQSTM1P1-201ENST00000603451 GRIK4Q16099 956 aa10.62□□□□□ -0.71
SQSTM1P1-201ENST00000603451 PTGISQ16647 500 aa10.62□□□□□ -0.71
SQSTM1P1-201ENST00000603451 HYIQ5T013 277 aa10.62□□□□□ -0.71
SQSTM1P1-201ENST00000603451 KRT79Q5XKE5 535 aa10.62□□□□□ -0.71
SQSTM1P1-201ENST00000603451 OTUD6AQ7L8S5 288 aa10.62□□□□□ -0.71
SQSTM1P1-201ENST00000603451 SPRYD3Q8NCJ5 442 aa10.62□□□□□ -0.71
SQSTM1P1-201ENST00000603451 LINC00301Q8NCQ3 95 aa10.62□□□□□ -0.71
SQSTM1P1-201ENST00000603451 LMBR1Q8WVP7 490 aa10.62□□□□□ -0.71
SQSTM1P1-201ENST00000603451 GJA10Q969M2 543 aa10.62□□□□□ -0.71
SQSTM1P1-201ENST00000603451 USP28Q96RU2 1077 aa10.62□□□□□ -0.71
SQSTM1P1-201ENST00000603451 NIFKQ9BYG3 293 aaKnown RBP10.62□□□□□ -0.71
SQSTM1P1-201ENST00000603451 SCAND2PQ9GZW5 306 aaPredicted RBP10.62□□□□□ -0.71
SQSTM1P1-201ENST00000603451 RNPEPQ9H4A4 650 aa10.62□□□□□ -0.71
SQSTM1P1-201ENST00000603451 PDLIM7Q9NR12 457 aa10.62□□□□□ -0.71
SQSTM1P1-201ENST00000603451 ANKEF1Q9NU02 776 aa10.62□□□□□ -0.71
SQSTM1P1-201ENST00000603451 HDAC6Q9UBN7 1215 aa10.62□□□□□ -0.71
SQSTM1P1-201ENST00000603451 SRPRBQ9Y5M8 271 aaKnown RBP10.62□□□□□ -0.71
SQSTM1P1-201ENST00000603451 INSRRP14616 1297 aa10.61□□□□□ -0.71
SQSTM1P1-201ENST00000603451 ATP4AP20648 1035 aa10.61□□□□□ -0.71
SQSTM1P1-201ENST00000603451 RFC2P35250 354 aa10.61□□□□□ -0.71
SQSTM1P1-201ENST00000603451 TXLNAP40222 546 aa10.61□□□□□ -0.71
SQSTM1P1-201ENST00000603451 RFC5P40937 340 aa10.61□□□□□ -0.71
SQSTM1P1-201ENST00000603451 FAAP100Q0VG06 881 aa10.61□□□□□ -0.71
SQSTM1P1-201ENST00000603451 STK38Q15208 465 aa10.61□□□□□ -0.71
SQSTM1P1-201ENST00000603451 UGCGQ16739 394 aa10.61□□□□□ -0.71
SQSTM1P1-201ENST00000603451 RSPH3Q86UC2 560 aa10.61□□□□□ -0.71
SQSTM1P1-201ENST00000603451 KRI1Q8N9T8 703 aaKnown RBP10.61□□□□□ -0.71
SQSTM1P1-201ENST00000603451 ZNF579Q8NAF0 562 aaKnown RBP10.61□□□□□ -0.71
SQSTM1P1-201ENST00000603451 RETREG2Q8NC44 543 aa10.61□□□□□ -0.71
SQSTM1P1-201ENST00000603451 SNX29Q8TEQ0 813 aa10.61□□□□□ -0.71
SQSTM1P1-201ENST00000603451 TSHZ2Q9NRE2 1034 aa10.61□□□□□ -0.71
SQSTM1P1-201ENST00000603451 DBR1Q9UK59 544 aaKnown RBP10.61□□□□□ -0.71
SQSTM1P1-201ENST00000603451 ZDHHC9Q9Y397 364 aa10.61□□□□□ -0.71
SQSTM1P1-201ENST00000603451 RBM19Q9Y4C8 960 aaKnown RBP10.61□□□□□ -0.71
SQSTM1P1-201ENST00000603451 TELO2Q9Y4R8 837 aa10.61□□□□□ -0.71
SQSTM1P1-201ENST00000603451 TRIP12Q14669 1992 aaPredicted RBP10.61□□□□□ -0.71
SQSTM1P1-201ENST00000603451 SMIM35A0A1B0GVV1 85 aa10.6□□□□□ -0.71
SQSTM1P1-201ENST00000603451 VWA3AA6NCI4 1184 aa10.6□□□□□ -0.71
SQSTM1P1-201ENST00000603451 SPTLC2O15270 562 aa10.6□□□□□ -0.71
SQSTM1P1-201ENST00000603451 CAPN15O75808 1086 aa10.6□□□□□ -0.71
SQSTM1P1-201ENST00000603451 SLITRK3O94933 977 aa10.6□□□□□ -0.71
SQSTM1P1-201ENST00000603451 PFKMP08237 780 aa10.6□□□□□ -0.71
SQSTM1P1-201ENST00000603451 SPATA31C1P0DKV0 1188 aa10.6□□□□□ -0.71
SQSTM1P1-201ENST00000603451 MARK3P27448 753 aa10.6□□□□□ -0.71
SQSTM1P1-201ENST00000603451 TMOD1P28289 359 aa10.6□□□□□ -0.71
SQSTM1P1-201ENST00000603451 YWHABP31946 246 aaKnown RBP10.6□□□□□ -0.71
SQSTM1P1-201ENST00000603451 CDC42EP1Q00587 391 aa10.6□□□□□ -0.71
SQSTM1P1-201ENST00000603451 TARBP2Q15633 366 aaKnown RBP10.6□□□□□ -0.71
SQSTM1P1-201ENST00000603451 GDF6Q6KF10 455 aaPredicted RBP10.6□□□□□ -0.71
SQSTM1P1-201ENST00000603451 ANO5Q75V66 913 aa10.6□□□□□ -0.71
SQSTM1P1-201ENST00000603451 CATSPER3Q86XQ3 398 aa10.6□□□□□ -0.71
SQSTM1P1-201ENST00000603451 C7orf61Q8IZ16 206 aa10.6□□□□□ -0.71
SQSTM1P1-201ENST00000603451 NME8Q8N427 588 aa10.6□□□□□ -0.71
SQSTM1P1-201ENST00000603451 BANK1Q8NDB2 785 aa10.6□□□□□ -0.71
SQSTM1P1-201ENST00000603451 SLC7A3Q8WY07 619 aa10.6□□□□□ -0.71
SQSTM1P1-201ENST00000603451 DPF3Q92784 378 aa10.6□□□□□ -0.71
SQSTM1P1-201ENST00000603451 DYDC2Q96IM9 177 aa10.6□□□□□ -0.71
SQSTM1P1-201ENST00000603451 CCDC43Q96MW1 224 aaKnown RBP10.6□□□□□ -0.71
SQSTM1P1-201ENST00000603451 IPO9Q96P70 1041 aaKnown RBP10.6□□□□□ -0.71
SQSTM1P1-201ENST00000603451 NACC1Q96RE7 527 aa10.6□□□□□ -0.71
SQSTM1P1-201ENST00000603451 CTAGE1Q96RT6 745 aa10.6□□□□□ -0.71
SQSTM1P1-201ENST00000603451 PYM1Q9BRP8 204 aaKnown RBP10.6□□□□□ -0.71
SQSTM1P1-201ENST00000603451 NOC4LQ9BVI4 516 aaKnown RBP10.6□□□□□ -0.71
SQSTM1P1-201ENST00000603451 CCSER1Q9C0I3 900 aa10.6□□□□□ -0.71
SQSTM1P1-201ENST00000603451 HIPK3Q9H422 1215 aa10.6□□□□□ -0.71
SQSTM1P1-201ENST00000603451 TMEM39AQ9NV64 488 aa10.6□□□□□ -0.71
SQSTM1P1-201ENST00000603451 KCND2Q9NZV8 630 aa10.6□□□□□ -0.71
SQSTM1P1-201ENST00000603451 CHMP5Q9NZZ3 219 aa10.6□□□□□ -0.71
SQSTM1P1-201ENST00000603451 FBXO2Q9UK22 296 aaPredicted RBP10.6□□□□□ -0.71
SQSTM1P1-201ENST00000603451 PCDHA2Q9Y5H9 948 aa10.6□□□□□ -0.71
SQSTM1P1-201ENST00000603451 CLIC4Q9Y696 253 aa10.6□□□□□ -0.71
SQSTM1P1-201ENST00000603451 MKI67P46013 3256 aaKnown RBP10.59□□□□□ -0.71
SQSTM1P1-201ENST00000603451 SIP14410 1827 aa10.59□□□□□ -0.71
SQSTM1P1-201ENST00000603451 TCHHQ07283 1943 aa10.59□□□□□ -0.71
SQSTM1P1-201ENST00000603451 IGKV6-21A0A0C4DH24 114 aa10.59□□□□□ -0.71
SQSTM1P1-201ENST00000603451 ZBTB42B2RXF5 422 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms