RNA–Protein interactions for RNA: ENST00000603380.5

ZNF559-213, Transcript of zinc finger protein 559, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF559, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF559-213ENST00000603380 TRIM7Q9C029 511 aa12.15□□□□□ -0.46
ZNF559-213ENST00000603380 SLITRK6Q9H5Y7 841 aa12.15□□□□□ -0.46
ZNF559-213ENST00000603380 DISC1Q9NRI5 854 aa12.15□□□□□ -0.46
ZNF559-213ENST00000603380 PCDH11XQ9BZA7 1347 aa12.15□□□□□ -0.46
ZNF559-213ENST00000603380 BICDL2A1A5D9 508 aa12.15□□□□□ -0.46
ZNF559-213ENST00000603380 CCDC188H7C350 402 aa12.15□□□□□ -0.46
ZNF559-213ENST00000603380 PGRMC1O00264 195 aaKnown RBP12.15□□□□□ -0.46
ZNF559-213ENST00000603380 AFPP02771 609 aaKnown RBP12.15□□□□□ -0.46
ZNF559-213ENST00000603380 RASA1P20936 1047 aa12.15□□□□□ -0.46
ZNF559-213ENST00000603380 POU5F1Q01860 360 aaKnown RBP12.15□□□□□ -0.46
ZNF559-213ENST00000603380 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.15□□□□□ -0.46
ZNF559-213ENST00000603380 LRMDAQ9H2I8 198 aa12.15□□□□□ -0.46
ZNF559-213ENST00000603380 NMRK1Q9NWW6 199 aa12.15□□□□□ -0.46
ZNF559-213ENST00000603380 TMCO1Q9UM00 188 aa12.15□□□□□ -0.46
ZNF559-213ENST00000603380 LRCH1Q9Y2L9 728 aa12.15□□□□□ -0.46
ZNF559-213ENST00000603380 SLC4A4Q9Y6R1 1079 aa12.15□□□□□ -0.46
ZNF559-213ENST00000603380 C5P01031 1676 aa12.15□□□□□ -0.46
ZNF559-213ENST00000603380 LMTK3Q96Q04 1460 aa12.15□□□□□ -0.46
ZNF559-213ENST00000603380 ATRNO75882 1429 aa12.15□□□□□ -0.47
ZNF559-213ENST00000603380 SIPA1L3O60292 1781 aaPredicted RBP12.15□□□□□ -0.47
ZNF559-213ENST00000603380 hCG_1642624A0A1W2PR95 340 aa12.14□□□□□ -0.47
ZNF559-213ENST00000603380 KRIT1O00522 736 aa12.14□□□□□ -0.47
ZNF559-213ENST00000603380 SFSWAPQ12872 951 aaKnown RBP12.14□□□□□ -0.47
ZNF559-213ENST00000603380 CCDC84Q86UT8 332 aaPredicted RBP12.14□□□□□ -0.47
ZNF559-213ENST00000603380 ZMYND12Q9H0C1 365 aa12.14□□□□□ -0.47
ZNF559-213ENST00000603380 GOLPH3Q9H4A6 298 aa12.14□□□□□ -0.47
ZNF559-213ENST00000603380 ZDHHC18Q9NUE0 388 aa12.14□□□□□ -0.47
ZNF559-213ENST00000603380 MYH4Q9Y623 1939 aa12.14□□□□□ -0.47
ZNF559-213ENST00000603380 SMIM23A6NLE4 172 aa12.14□□□□□ -0.47
ZNF559-213ENST00000603380 XBP1P17861 261 aa12.14□□□□□ -0.47
ZNF559-213ENST00000603380 RXRBP28702 533 aa12.14□□□□□ -0.47
ZNF559-213ENST00000603380 CACNA2D1P54289 1103 aa12.14□□□□□ -0.47
ZNF559-213ENST00000603380 LMNB2Q03252 620 aa12.14□□□□□ -0.47
ZNF559-213ENST00000603380 STK4Q13043 487 aa12.14□□□□□ -0.47
ZNF559-213ENST00000603380 WTAPQ15007 396 aa12.14□□□□□ -0.47
ZNF559-213ENST00000603380 MIPOL1Q8TD10 442 aa12.14□□□□□ -0.47
ZNF559-213ENST00000603380 NEK9Q8TD19 979 aa12.14□□□□□ -0.47
ZNF559-213ENST00000603380 FAM192AQ9GZU8 254 aa12.14□□□□□ -0.47
ZNF559-213ENST00000603380 KBTBD4Q9NVX7 518 aa12.14□□□□□ -0.47
ZNF559-213ENST00000603380 CTTNBP2NLQ9P2B4 639 aa12.14□□□□□ -0.47
ZNF559-213ENST00000603380 H0Y3Z8 333 aa12.14□□□□□ -0.47
ZNF559-213ENST00000603380 HGSO14964 777 aaPredicted RBP12.14□□□□□ -0.47
ZNF559-213ENST00000603380 CIAO1O76071 339 aa12.14□□□□□ -0.47
ZNF559-213ENST00000603380 LRRC14Q15048 493 aa12.14□□□□□ -0.47
ZNF559-213ENST00000603380 MUM1Q2TAK8 710 aa12.14□□□□□ -0.47
ZNF559-213ENST00000603380 UBAP2Q5T6F2 1119 aaKnown RBP12.14□□□□□ -0.47
ZNF559-213ENST00000603380 METTL13Q8N6R0 699 aa12.14□□□□□ -0.47
ZNF559-213ENST00000603380 LRRC15Q8TF66 581 aa12.14□□□□□ -0.47
ZNF559-213ENST00000603380 MROH7Q68CQ1 1323 aa12.13□□□□□ -0.47
ZNF559-213ENST00000603380 PNPLA7Q6ZV29 1317 aa12.13□□□□□ -0.47
ZNF559-213ENST00000603380 NVLO15381 856 aaKnown RBP12.13□□□□□ -0.47
ZNF559-213ENST00000603380 MCM7P33993 719 aa12.13□□□□□ -0.47
ZNF559-213ENST00000603380 LONP1P36776 959 aaKnown RBP12.13□□□□□ -0.47
ZNF559-213ENST00000603380 CD151P48509 253 aa12.13□□□□□ -0.47
ZNF559-213ENST00000603380 SERPINB4P48594 390 aa12.13□□□□□ -0.47
ZNF559-213ENST00000603380 PMS2P54278 862 aa12.13□□□□□ -0.47
ZNF559-213ENST00000603380 CCDC15Q0P6D6 951 aa12.13□□□□□ -0.47
ZNF559-213ENST00000603380 FUT2Q10981 343 aa12.13□□□□□ -0.47
ZNF559-213ENST00000603380 SLC29A2Q14542 456 aa12.13□□□□□ -0.47
ZNF559-213ENST00000603380 SLC9C1Q4G0N8 1177 aa12.13□□□□□ -0.47
ZNF559-213ENST00000603380 C6orf118Q5T5N4 469 aa12.13□□□□□ -0.47
ZNF559-213ENST00000603380 CGB2Q6NT52 195 aa12.13□□□□□ -0.47
ZNF559-213ENST00000603380 BICDL1Q6ZP65 573 aa12.13□□□□□ -0.47
ZNF559-213ENST00000603380 ZNF654Q8IZM8 581 aa12.13□□□□□ -0.47
ZNF559-213ENST00000603380 TTC8Q8TAM2 541 aa12.13□□□□□ -0.47
ZNF559-213ENST00000603380 GATA6Q92908 595 aa12.13□□□□□ -0.47
ZNF559-213ENST00000603380 TRIM51Q9BSJ1 452 aa12.13□□□□□ -0.47
ZNF559-213ENST00000603380 UTP11Q9Y3A2 253 aaKnown RBP12.13□□□□□ -0.47
ZNF559-213ENST00000603380 CHD4Q14839 1912 aa12.13□□□□□ -0.47
ZNF559-213ENST00000603380 A0A087X0T9 212 aa12.13□□□□□ -0.47
ZNF559-213ENST00000603380 FAM228BP0C875 321 aa12.13□□□□□ -0.47
ZNF559-213ENST00000603380 RCAN1P53805 252 aa12.13□□□□□ -0.47
ZNF559-213ENST00000603380 MCL1Q07820 350 aa12.13□□□□□ -0.47
ZNF559-213ENST00000603380 RCN2Q14257 317 aa12.13□□□□□ -0.47
ZNF559-213ENST00000603380 SLC18A3Q16572 532 aa12.13□□□□□ -0.47
ZNF559-213ENST00000603380 ZC2HC1CQ53FD0 456 aaPredicted RBP12.13□□□□□ -0.47
ZNF559-213ENST00000603380 C1orf141Q5JVX7 400 aa12.13□□□□□ -0.47
ZNF559-213ENST00000603380 DENND2CQ68D51 928 aa12.13□□□□□ -0.47
ZNF559-213ENST00000603380 RNF43Q68DV7 783 aa12.13□□□□□ -0.47
ZNF559-213ENST00000603380 ECHDC2Q86YB7 292 aa12.13□□□□□ -0.47
ZNF559-213ENST00000603380 C4orf32Q8N8J7 132 aa12.13□□□□□ -0.47
ZNF559-213ENST00000603380 LRRC57Q8N9N7 239 aa12.13□□□□□ -0.47
ZNF559-213ENST00000603380 EDEM3Q9BZQ6 932 aa12.13□□□□□ -0.47
ZNF559-213ENST00000603380 TRIM31Q9BZY9 425 aa12.13□□□□□ -0.47
ZNF559-213ENST00000603380 EPB41L4AQ9HCS5 686 aaPredicted RBP12.13□□□□□ -0.47
ZNF559-213ENST00000603380 LUC7LQ9NQ29 371 aaKnown RBP12.13□□□□□ -0.47
ZNF559-213ENST00000603380 CEP126Q9P2H0 1117 aa12.13□□□□□ -0.47
ZNF559-213ENST00000603380 TJP3O95049 919 aa12.12□□□□□ -0.47
ZNF559-213ENST00000603380 SERPING1P05155 500 aa12.12□□□□□ -0.47
ZNF559-213ENST00000603380 KCNA3P22001 575 aa12.12□□□□□ -0.47
ZNF559-213ENST00000603380 ALX1Q15699 326 aa12.12□□□□□ -0.47
ZNF559-213ENST00000603380 CNPY1Q3B7I2 92 aa12.12□□□□□ -0.47
ZNF559-213ENST00000603380 AGGF1Q8N302 714 aaeCLIP12.12□□□□□ -0.47
ZNF559-213ENST00000603380 RASGEF1CQ8N431 466 aa12.12□□□□□ -0.47
ZNF559-213ENST00000603380 SH3TC2Q8TF17 1288 aa12.12□□□□□ -0.47
ZNF559-213ENST00000603380 YIPF2Q9BWQ6 316 aa12.12□□□□□ -0.47
ZNF559-213ENST00000603380 PPP1R12CQ9BZL4 782 aa12.12□□□□□ -0.47
ZNF559-213ENST00000603380 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.12□□□□□ -0.47
ZNF559-213ENST00000603380 SEMA6BQ9H3T3 888 aa12.12□□□□□ -0.47
ZNF559-213ENST00000603380 TXLNGQ9NUQ3 528 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms